BLASTX nr result

ID: Zingiber24_contig00040898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040898
         (313 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006376751.1| hypothetical protein POPTR_0012s05720g [Popu...    56   4e-06

>ref|XP_006376751.1| hypothetical protein POPTR_0012s05720g [Populus trichocarpa]
           gi|550326457|gb|ERP54548.1| hypothetical protein
           POPTR_0012s05720g [Populus trichocarpa]
          Length = 293

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 16/80 (20%)
 Frame = +1

Query: 1   SIHDITSANGA-------------VDDXXXXXXXXXXXXMKHRHSLANVPGMAVYGPPVG 141
           SIHDITS N                +             +KHR + A++PG+A+YGPP+G
Sbjct: 190 SIHDITSLNNGDVSSHQAPITGQQANTSPAGPAPAMGPPVKHR-TQAHMPGLAMYGPPLG 248

Query: 142 HPIS---GHMVTAVGTPVML 192
           HP++   GHM +AVGTPVML
Sbjct: 249 HPVAPPPGHMASAVGTPVML 268


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