BLASTX nr result

ID: Zingiber24_contig00040895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040895
         (215 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006842252.1| hypothetical protein AMTR_s00078p00197410 [A...    57   3e-06
ref|XP_006476103.1| PREDICTED: leucine-rich repeat extensin-like...    56   4e-06
ref|XP_006451102.1| hypothetical protein CICLE_v100107081mg, par...    56   6e-06
ref|XP_004173680.1| PREDICTED: leucine-rich repeat extensin-like...    55   1e-05
ref|XP_004139428.1| PREDICTED: leucine-rich repeat extensin-like...    55   1e-05

>ref|XP_006842252.1| hypothetical protein AMTR_s00078p00197410 [Amborella trichopoda]
           gi|548844301|gb|ERN03927.1| hypothetical protein
           AMTR_s00078p00197410 [Amborella trichopoda]
          Length = 874

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = -2

Query: 109 HGLKDAEVGLIRRRQLLYYLDQYGDRGESVSVDPSF 2
           HGL  AE   I+ RQLLYY+D+YGDRGESV VDPSF
Sbjct: 74  HGLTFAEASSIKHRQLLYYIDRYGDRGESVFVDPSF 109


>ref|XP_006476103.1| PREDICTED: leucine-rich repeat extensin-like protein 3-like [Citrus
           sinensis]
          Length = 700

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
 Frame = -2

Query: 172 CCFVFLLLIYSXXXXXXEIGGHG-LKDAEVGLIRRRQLLYYLDQYGDRGESVSVDPS 5
           CCF       S       I GHG L DAE   IR+RQLLYY D++GDRGE+V+VDPS
Sbjct: 26  CCFG------SAAAEVVPIAGHGGLTDAEAHYIRQRQLLYYRDEFGDRGENVTVDPS 76


>ref|XP_006451102.1| hypothetical protein CICLE_v100107081mg, partial [Citrus
           clementina] gi|557554328|gb|ESR64342.1| hypothetical
           protein CICLE_v100107081mg, partial [Citrus clementina]
          Length = 190

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/39 (69%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = -2

Query: 118 IGGHG-LKDAEVGLIRRRQLLYYLDQYGDRGESVSVDPS 5
           I GHG L DAE   IR+RQLLYY D++GDRGE+V+VDPS
Sbjct: 4   IAGHGGLTDAEAHYIRQRQLLYYRDEFGDRGENVTVDPS 42


>ref|XP_004173680.1| PREDICTED: leucine-rich repeat extensin-like protein 5-like,
           partial [Cucumis sativus]
          Length = 451

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = -2

Query: 115 GGHGLKDAEVGLIRRRQLLYYLDQYGDRGESVSVDP 8
           GG GL DAE   IR+RQLLYY D++GDRGE V VDP
Sbjct: 43  GGRGLTDAEAHYIRQRQLLYYRDEFGDRGEEVVVDP 78


>ref|XP_004139428.1| PREDICTED: leucine-rich repeat extensin-like protein 4-like
           [Cucumis sativus]
          Length = 608

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = -2

Query: 115 GGHGLKDAEVGLIRRRQLLYYLDQYGDRGESVSVDP 8
           GG GL DAE   IR+RQLLYY D++GDRGE V VDP
Sbjct: 43  GGRGLTDAEAHYIRQRQLLYYRDEFGDRGEEVVVDP 78


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