BLASTX nr result
ID: Zingiber24_contig00040842
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00040842
(504 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBL87031.1| RNA polymerase [Nuphar advena] 196 2e-48
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 196 3e-48
gb|EMS47556.1| DNA-directed RNA polymerase 2, chloroplastic/mito... 194 8e-48
emb|CAE52834.1| RNA polymerase [Hordeum vulgare] 194 1e-47
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 194 1e-47
gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mito... 193 2e-47
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 192 3e-47
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 192 3e-47
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 192 3e-47
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa... 192 3e-47
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g... 192 3e-47
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 192 3e-47
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo... 192 3e-47
gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Tritic... 192 4e-47
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 192 4e-47
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 191 9e-47
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 189 3e-46
ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays] gi|... 189 3e-46
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays] 189 3e-46
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 187 1e-45
>emb|CBL87031.1| RNA polymerase [Nuphar advena]
Length = 990
Score = 196 bits (499), Expect = 2e-48
Identities = 96/167 (57%), Positives = 122/167 (73%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA KEYKE++ DMC KLA NLP++KSL LGWFEPLRDRIA EQE CR R
Sbjct: 169 IETEAWEQAAKEYKELMMDMCKNKLAXNLPYIKSLFLGWFEPLRDRIASEQEACRRGKCR 228
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
A++ PY N+LPA+ MAVITMHK++ L+M+S + C VVQAAC+IGDAIE+E RI LE
Sbjct: 229 AAYGPYLNRLPAEMMAVITMHKLVGLMMTSGDHGCARVVQAACRIGDAIENESRIHSFLE 288
Query: 142 XXXXXXXXXXKSDETGVSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
++E +V +E+E +RKKVTNL+K+QK V K++K
Sbjct: 289 KTKKKHARGNMAEEEPETVTKEKEFLRKKVTNLIKKQKLRQVTKLVK 335
>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Setaria italica]
Length = 1005
Score = 196 bits (498), Expect = 3e-48
Identities = 98/169 (57%), Positives = 126/169 (74%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
+E+EAWEQA KEY+E+L DMC++KLAPNLP++KSL LGWFEPLRD+IA EQE +G+R
Sbjct: 175 VETEAWEQAAKEYRELLTDMCEQKLAPNLPYIKSLFLGWFEPLRDQIAAEQELVANRGSR 234
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASH PYFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+AIEHE RI LE
Sbjct: 235 ASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHRFLE 294
Query: 142 XXXXXXXXXXKSDET--GVSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
+++E + +EQ+ +RKKVT+LMK+QK VRK++K
Sbjct: 295 KTRKKSNKEKENEEEIFDSDIAKEQQRLRKKVTDLMKKQKLRQVRKIVK 343
>gb|EMS47556.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Triticum urartu]
Length = 854
Score = 194 bits (494), Expect = 8e-48
Identities = 98/169 (57%), Positives = 121/169 (71%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA KEY+E+L DMC+ KLAPNLP++KSL LGWFEPLRD+I EQE E+G R
Sbjct: 52 IETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVSERGTR 111
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASHAPYFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+A+EHE RI LE
Sbjct: 112 ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAVEHEVRIHKFLE 171
Query: 142 XXXXXXXXXXKS--DETGVSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
+ + +EQE +RKKVT+LMK+QK VR ++K
Sbjct: 172 KTKKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLVK 220
>emb|CAE52834.1| RNA polymerase [Hordeum vulgare]
Length = 862
Score = 194 bits (493), Expect = 1e-47
Identities = 101/169 (59%), Positives = 124/169 (73%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA KEY+E+L DMC+ KLAPNLP++KSL LGWFEPLRD+I EQE E+G R
Sbjct: 34 IETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGTR 93
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASHAPYFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+A+EHE RI LE
Sbjct: 94 ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAVEHEVRIHKFLE 153
Query: 142 XXXXXXXXXXKS-DETGVS-VNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
E G S + +EQ+L+RKKVT+LMK+QK VR ++K
Sbjct: 154 KTKKKNTKEVDKVVEPGDSDIAKEQQLLRKKVTDLMKKQKIRQVRHLVK 202
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial [Vitis vinifera]
gi|298204431|emb|CBI16911.3| unnamed protein product
[Vitis vinifera]
Length = 1035
Score = 194 bits (492), Expect = 1e-47
Identities = 102/169 (60%), Positives = 122/169 (72%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWE A KEYKE+L DMC++KLAPNLP+MKSL LGWFEPLRD I +EQE CR N+
Sbjct: 204 IETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKNK 263
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
A++APYF+QLPAD M+VITMHK++ LLM+ E VVQAAC IGDAIE E RI LE
Sbjct: 264 AAYAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNFLE 323
Query: 142 XXXXXXXXXXKSDETG--VSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
K+ E G V EQE +RKKVTNLMK+QK H R+++K
Sbjct: 324 KTKRKKVGKDKNVEGGGFDPVIHEQEKLRKKVTNLMKKQKLHAARQIVK 372
>gb|EMT11393.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Aegilops tauschii]
Length = 884
Score = 193 bits (491), Expect = 2e-47
Identities = 97/169 (57%), Positives = 121/169 (71%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA KEY+E+L DMC+ KLAPNLP++KSL LGWFEPLRD+I EQE ++G R
Sbjct: 101 IETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVSQRGTR 160
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASHAPYFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+A+EHE RI LE
Sbjct: 161 ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAVEHEVRIHKFLE 220
Query: 142 XXXXXXXXXXKS--DETGVSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
+ + +EQE +RKKVT+LMK+QK VR ++K
Sbjct: 221 KTKKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLVK 269
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 192 bits (489), Expect = 3e-47
Identities = 100/170 (58%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA EY+E+L DMC++KLAPNLP+MKSL LGWFEPLRD IA+EQE+CR ++
Sbjct: 199 IETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHK 258
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
++APYF+QLPAD MAVITMHK++ LLM+ E VVQAAC IGDAIE E RI LE
Sbjct: 259 VAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLE 318
Query: 142 XXXXXXXXXXKSDETG---VSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
K DE G +V EQE +RKKVT+L+K+QK VR+++K
Sbjct: 319 KTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVK 368
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 192 bits (489), Expect = 3e-47
Identities = 100/170 (58%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA EY+E+L DMC++KLAPNLP+MKSL LGWFEPLRD IA+EQE+CR ++
Sbjct: 199 IETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHK 258
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
++APYF+QLPAD MAVITMHK++ LLM+ E VVQAAC IGDAIE E RI LE
Sbjct: 259 VAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLE 318
Query: 142 XXXXXXXXXXKSDETG---VSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
K DE G +V EQE +RKKVT+L+K+QK VR+++K
Sbjct: 319 KTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVK 368
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 192 bits (489), Expect = 3e-47
Identities = 100/170 (58%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA EY+E+L DMC++KLAPNLP+MKSL LGWFEPLRD IA+EQE+CR ++
Sbjct: 199 IETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHK 258
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
++APYF+QLPAD MAVITMHK++ LLM+ E VVQAAC IGDAIE E RI LE
Sbjct: 259 VAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLE 318
Query: 142 XXXXXXXXXXKSDETG---VSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
K DE G +V EQE +RKKVT+L+K+QK VR+++K
Sbjct: 319 KTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVK 368
>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
gi|48716846|dbj|BAD23544.1| putative phage-type RNA
polymerase [Oryza sativa Japonica Group]
gi|215694941|dbj|BAG90132.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 951
Score = 192 bits (489), Expect = 3e-47
Identities = 99/169 (58%), Positives = 123/169 (72%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA +EY+E+L DMC +KLAPNLP++KSL LGWFEPLRD+I EQE E+G R
Sbjct: 187 IETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGAR 246
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASHA YFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+AIEHE RI LE
Sbjct: 247 ASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLE 306
Query: 142 XXXXXXXXXXKSDETG--VSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
++E G + +EQE +RKKVT+LMK+QK VR ++K
Sbjct: 307 KTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVK 355
>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
single subunit RNA polymerase [Oryza sativa Japonica
Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
sativa Japonica Group]
Length = 1017
Score = 192 bits (489), Expect = 3e-47
Identities = 99/169 (58%), Positives = 123/169 (72%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA +EY+E+L DMC +KLAPNLP++KSL LGWFEPLRD+I EQE E+G R
Sbjct: 187 IETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGAR 246
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASHA YFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+AIEHE RI LE
Sbjct: 247 ASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLE 306
Query: 142 XXXXXXXXXXKSDETG--VSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
++E G + +EQE +RKKVT+LMK+QK VR ++K
Sbjct: 307 KTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVK 355
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 192 bits (489), Expect = 3e-47
Identities = 96/170 (56%), Positives = 123/170 (72%), Gaps = 3/170 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
+E+EAWEQA KEY+E+L DMC++KLAPNLP++KSL LGWFEPLRD+I EQE + G+R
Sbjct: 145 VETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLRDQIVTEQELVADPGSR 204
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASH PYFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+AIEHE RI LE
Sbjct: 205 ASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRINRFLE 264
Query: 142 XXXXXXXXXXKSDETG---VSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
+ +E + +EQ+ +RKKVT+LMK+QK VR ++K
Sbjct: 265 KTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQVRNIVK 314
>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
Length = 983
Score = 192 bits (489), Expect = 3e-47
Identities = 99/169 (58%), Positives = 123/169 (72%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA +EY+E+L DMC +KLAPNLP++KSL LGWFEPLRD+I EQE E+G R
Sbjct: 153 IETEAWEQAAEEYRELLADMCQQKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGAR 212
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASHA YFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+AIEHE RI LE
Sbjct: 213 ASHARYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLE 272
Query: 142 XXXXXXXXXXKSDETG--VSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
++E G + +EQE +RKKVT+LMK+QK VR ++K
Sbjct: 273 KTKKKSNKEMDNEEEGGDSDIAKEQERLRKKVTDLMKKQKIRQVRNIVK 321
>gb|AAF32492.1|AF091838_1 single-subunit RNA polymerase G [Triticum aestivum]
Length = 1005
Score = 192 bits (488), Expect = 4e-47
Identities = 97/169 (57%), Positives = 120/169 (71%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA KEY+E+L DMC+ KLAPNLP++KSL L WFEPLRD+I EQE E+G R
Sbjct: 176 IETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLSWFEPLRDQIIAEQELVSERGTR 235
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASHAPYFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+A+EHE RI LE
Sbjct: 236 ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAVEHEVRIHKFLE 295
Query: 142 XXXXXXXXXXKS--DETGVSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
+ + +EQE +RKKVT+LMK+QK VR ++K
Sbjct: 296 KTKKKNTKEVDKVVEAVDADIAKEQERLRKKVTDLMKKQKIRQVRHLVK 344
>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Brachypodium
distachyon]
Length = 992
Score = 192 bits (488), Expect = 4e-47
Identities = 101/169 (59%), Positives = 124/169 (73%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA KEY+E+L DMC+ KLAPNLP++KSL LGWFEPLRD+I EQE E+G R
Sbjct: 162 IETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLRDQIIAEQELVGERGAR 221
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASHAPYFN LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+AIEHE RI LE
Sbjct: 222 ASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRIHKFLE 281
Query: 142 XXXXXXXXXXKS-DETGVS-VNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
+ E G S + +EQ+ +RKKVT+LMK+QK VR ++K
Sbjct: 282 KTKKKNTKEVDNVVEAGDSDIAKEQQRLRKKVTDLMKKQKIRQVRNIVK 330
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 191 bits (485), Expect = 9e-47
Identities = 99/170 (58%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWE+A EY+E+L DMC++KLAPNLP+MKSL LGWFEPLRD IA+EQE+CR ++
Sbjct: 195 IETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKHK 254
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
++APYF+QLPAD MAVITMHK++ LLM+ E VVQAAC IGDAIE E RI LE
Sbjct: 255 VAYAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKFLE 314
Query: 142 XXXXXXXXXXKSDETG---VSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
K DE G +V EQE +RKKVT+L+K+QK VR+++K
Sbjct: 315 KTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVK 364
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 189 bits (481), Expect = 3e-46
Identities = 94/167 (56%), Positives = 122/167 (73%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
+E+EAWE+A KEY+E+L DMC++KLAPNLP++KSL LGWFEPLRD IA EQ+ C++ NR
Sbjct: 150 METEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKNR 209
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
A++APYF+ LPAD MAVITMHK++ LLM+ + VVQAAC IG+AIEHE RIQ +E
Sbjct: 210 AAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRFME 269
Query: 142 XXXXXXXXXXKSDETGVSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
D V +EQE +RKKV+ LMK+QK VR+++K
Sbjct: 270 KTKKKSASSNNPDGGSNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVK 316
>ref|NP_001104931.1| RNA polymerase T phage-like 1 [Zea mays]
gi|4559304|gb|AAD22976.1|AF127021_1 T7-like RNA
polymerase [Zea mays]
Length = 975
Score = 189 bits (481), Expect = 3e-46
Identities = 96/169 (56%), Positives = 123/169 (72%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA EY+E+L DMC++KLAPNLP++KSL LGWFEPLRD+IA EQE + G+R
Sbjct: 145 IETEAWEQAANEYRELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIATEQELVADPGSR 204
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASH P+F+ LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+AIEHE RI LE
Sbjct: 205 ASHGPFFSMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRINRFLE 264
Query: 142 XXXXXXXXXXKSDETGVSVN--EEQELIRKKVTNLMKRQKHHIVRKMIK 2
+++E N EQ+ +RKKVT+LMK+QK VR ++K
Sbjct: 265 KTRKKNNKEMENEEEAGDTNIAVEQQRLRKKVTDLMKKQKLRQVRNIVK 313
>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
Length = 975
Score = 189 bits (480), Expect = 3e-46
Identities = 96/169 (56%), Positives = 123/169 (72%), Gaps = 2/169 (1%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
IE+EAWEQA EY+E+L DMC++KLAPNLP++KSL LGWFEPLRD+IA EQE + G+R
Sbjct: 145 IETEAWEQAANEYRELLADMCEQKLAPNLPYVKSLFLGWFEPLRDQIATEQELVADPGSR 204
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
ASH P+F+ LPAD MAVITMHK++ LLM+ S V V+QAAC+IG+AIEHE RI LE
Sbjct: 205 ASHGPFFSMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQIGEAIEHEVRINRFLE 264
Query: 142 XXXXXXXXXXKSDETGVSVN--EEQELIRKKVTNLMKRQKHHIVRKMIK 2
+++E N EQ+ +RKKVT+LMK+QK VR ++K
Sbjct: 265 KTRKKNNKEMENEEEAGDTNIAIEQQRLRKKVTDLMKKQKLRQVRNIVK 313
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 187 bits (475), Expect = 1e-45
Identities = 96/167 (57%), Positives = 120/167 (71%)
Frame = -3
Query: 502 IESEAWEQATKEYKEMLKDMCDRKLAPNLPFMKSLLLGWFEPLRDRIAREQEKCREKGNR 323
+E+EAWEQA KEYKE+L DMC++KLAPNLP++KSL LGWFEPLRD+IA EQE C + ++
Sbjct: 192 VETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKSK 251
Query: 322 ASHAPYFNQLPADKMAVITMHKMISLLMSSSESRCVPVVQAACKIGDAIEHEGRIQWILE 143
A++A YF QLPAD MAVITMHK++ LLM+ + VVQAA IGDAIE E RI LE
Sbjct: 252 AAYAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNFLE 311
Query: 142 XXXXXXXXXXKSDETGVSVNEEQELIRKKVTNLMKRQKHHIVRKMIK 2
K E G V +EQE +RKKVTNLMK+QK V ++++
Sbjct: 312 KTKKQKAEKDKQKEDGEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVR 358