BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040800
         (408 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309876.2| ubiquitin family protein [Populus trichocarp...    95   1e-17
ref|XP_003560349.1| PREDICTED: transcription initiation factor T...    93   4e-17
gb|EMJ26687.1| hypothetical protein PRUPE_ppa000092mg [Prunus pe...    92   6e-17
sp|Q67W65.1|TAF1_ORYSJ RecName: Full=Transcription initiation fa...    92   6e-17
gb|EEE66112.1| hypothetical protein OsJ_22148 [Oryza sativa Japo...    92   6e-17
gb|EEC81073.1| hypothetical protein OsI_23891 [Oryza sativa Indi...    92   6e-17
gb|EMT07791.1| hypothetical protein F775_01982 [Aegilops tauschii]     92   9e-17
gb|EMS57087.1| Transcription initiation factor TFIID subunit 1 [...    92   9e-17
ref|XP_006657187.1| PREDICTED: transcription initiation factor T...    91   2e-16
ref|XP_002323740.2| hypothetical protein POPTR_0017s07490g [Popu...    91   2e-16
ref|XP_002273712.2| PREDICTED: transcription initiation factor T...    90   4e-16
gb|EMS63019.1| Transcription initiation factor TFIID subunit 1 [...    88   1e-15
ref|XP_004288581.1| PREDICTED: transcription initiation factor T...    88   1e-15
ref|XP_006366188.1| PREDICTED: transcription initiation factor T...    87   3e-15
ref|XP_006366187.1| PREDICTED: transcription initiation factor T...    87   3e-15
ref|XP_006366186.1| PREDICTED: transcription initiation factor T...    87   3e-15
gb|EMT07789.1| hypothetical protein F775_06671 [Aegilops tauschii]     86   4e-15
gb|AFW87279.1| hypothetical protein ZEAMMB73_604430 [Zea mays]         86   7e-15
gb|EXB57308.1| Transcription initiation factor TFIID subunit 1-A...    84   2e-14
emb|CBI21835.3| unnamed protein product [Vitis vinifera]               84   2e-14

>ref|XP_002309876.2| ubiquitin family protein [Populus trichocarpa]
           gi|550334051|gb|EEE90326.2| ubiquitin family protein
           [Populus trichocarpa]
          Length = 1891

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 60/131 (45%), Positives = 77/131 (58%), Gaps = 4/131 (3%)
 Frame = +3

Query: 3   LVESFGSRSFSIPRFNKACDVTCLPQSNGSELNSKRVLLSSTESVTDKRSE---AVSKDG 173
           L+ESFGS  +S P      +  C PQ    E    R+   S+  V D+R      + K  
Sbjct: 419 LLESFGSGDYSEPGNLPLLESRCHPQLLRLE---SRLEEDSSNHVNDRRENNAVELHKSD 475

Query: 174 VLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQLS 353
            L R +KL+  N++ +E SWLD IIW+  E   KPKLILDLQD+QMLFEILD+  S  L 
Sbjct: 476 ALRRFSKLTLQNRDLMEGSWLDDIIWEPCEANIKPKLILDLQDEQMLFEILDHRDSKHLQ 535

Query: 354 -HAGAIIISRP 383
            HAGA+II+RP
Sbjct: 536 LHAGAMIITRP 546


>ref|XP_003560349.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           [Brachypodium distachyon]
          Length = 1830

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +3

Query: 120 SSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQ 299
           ++ + +        +K   +  LN LS LNKE LE SWLD+IIWD  E+ PKPKLI DL+
Sbjct: 469 NNLDEIEPNNINGTAKINTMKCLNNLSLLNKELLEGSWLDNIIWDPTEDTPKPKLIFDLK 528

Query: 300 DDQMLFEILDYTVSDQL-SHAGAIIISRP 383
           DDQMLFEILD    D L SHA A+I+SRP
Sbjct: 529 DDQMLFEILDEKNGDHLRSHARAMIVSRP 557


>gb|EMJ26687.1| hypothetical protein PRUPE_ppa000092mg [Prunus persica]
          Length = 1849

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 55/134 (41%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
 Frame = +3

Query: 3   LVESFGSRSFSIPRFNKACDVTCLPQSNGS------ELNSKRVLLSSTESVTDKRSEAVS 164
           L+E FGSR+ S        ++ CLP S          L S+  +   T+   +   E + 
Sbjct: 369 LLEPFGSRNSS--------ELLCLPVSESRCHPQLLRLESRFEVDDHTDGTMESVGEKLH 420

Query: 165 KDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSD 344
           +   +   +KL+S N++ L+ SWLD IIWD D    KPKLILDLQD+QMLFEILD   S+
Sbjct: 421 QSDAVREFSKLTSQNRDMLKGSWLDQIIWDPDMPTGKPKLILDLQDEQMLFEILDNKESE 480

Query: 345 QLS-HAGAIIISRP 383
            L  H+GA+I++RP
Sbjct: 481 HLRLHSGAMIVTRP 494


>sp|Q67W65.1|TAF1_ORYSJ RecName: Full=Transcription initiation factor TFIID subunit 1;
           AltName: Full=TAFII250 gi|51535532|dbj|BAD37451.1|
           putative HAC13 protein [Oryza sativa Japonica Group]
           gi|51535630|dbj|BAD37604.1| putative HAC13 protein
           [Oryza sativa Japonica Group]
          Length = 1810

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = +3

Query: 186 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQL-SHAG 362
           LNKLS LNKE LE SWLD+I+WD  E++PKPKLI DL+DD MLFEILD    D L SHA 
Sbjct: 465 LNKLSLLNKELLEGSWLDNIVWDPSEDVPKPKLIFDLKDDHMLFEILDEKNGDHLRSHAR 524

Query: 363 AIIISRP 383
           A+I++RP
Sbjct: 525 AMIVTRP 531


>gb|EEE66112.1| hypothetical protein OsJ_22148 [Oryza sativa Japonica Group]
          Length = 1804

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = +3

Query: 186 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQL-SHAG 362
           LNKLS LNKE LE SWLD+I+WD  E++PKPKLI DL+DD MLFEILD    D L SHA 
Sbjct: 465 LNKLSLLNKELLEGSWLDNIVWDPSEDVPKPKLIFDLKDDHMLFEILDEKNGDHLRSHAR 524

Query: 363 AIIISRP 383
           A+I++RP
Sbjct: 525 AMIVTRP 531


>gb|EEC81073.1| hypothetical protein OsI_23891 [Oryza sativa Indica Group]
          Length = 1773

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = +3

Query: 186 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQL-SHAG 362
           LNKLS LNKE LE SWLD+I+WD  E++PKPKLI DL+DD MLFEILD    D L SHA 
Sbjct: 465 LNKLSLLNKELLEGSWLDNIVWDPSEDVPKPKLIFDLKDDHMLFEILDEKNGDHLRSHAR 524

Query: 363 AIIISRP 383
           A+I++RP
Sbjct: 525 AMIVTRP 531


>gb|EMT07791.1| hypothetical protein F775_01982 [Aegilops tauschii]
          Length = 1881

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = +3

Query: 186 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQL-SHAG 362
           L+ LS LNKE LE SWLD++IWD  E+ PKPKLILDL+DDQMLFEILD    D L SHA 
Sbjct: 472 LSNLSLLNKELLEGSWLDNVIWDPSEDTPKPKLILDLKDDQMLFEILDEKNGDHLRSHAR 531

Query: 363 AIIISRP 383
           A+I+SRP
Sbjct: 532 AMIVSRP 538


>gb|EMS57087.1| Transcription initiation factor TFIID subunit 1 [Triticum urartu]
          Length = 2008

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 46/67 (68%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
 Frame = +3

Query: 186 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQL-SHAG 362
           L+ LS LNKE LE SWLD++IWD  E+ PKPKLILDL+DDQMLFEILD    D L SHA 
Sbjct: 472 LSNLSLLNKELLEGSWLDNVIWDPSEDTPKPKLILDLKDDQMLFEILDEKNGDHLRSHAR 531

Query: 363 AIIISRP 383
           A+I+SRP
Sbjct: 532 AMIVSRP 538


>ref|XP_006657187.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           [Oryza brachyantha]
          Length = 1813

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = +3

Query: 165 KDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSD 344
           K   +  LNKLS LNKE LE SWLD+I+WD  E+ PKPKLI DL+DD MLFEILD   S 
Sbjct: 460 KIDTMRHLNKLSLLNKELLEGSWLDNIVWDPSEDAPKPKLIFDLKDDHMLFEILDEKNSG 519

Query: 345 QL-SHAGAIIISRP 383
            L SHA A+++SRP
Sbjct: 520 HLRSHARAMLVSRP 533


>ref|XP_002323740.2| hypothetical protein POPTR_0017s07490g [Populus trichocarpa]
           gi|550319704|gb|EEF03873.2| hypothetical protein
           POPTR_0017s07490g [Populus trichocarpa]
          Length = 1820

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 57/130 (43%), Positives = 78/130 (60%), Gaps = 4/130 (3%)
 Frame = +3

Query: 3   LVESFGSRSFSIPRFNKACDVTCLPQSNGSELNSKRVLLSSTESVTDKR---SEAVSKDG 173
           L+ESFGS   S P      +  C PQ    E    ++ + S+  V D+R   S  + +  
Sbjct: 349 LLESFGSEDSSEPGNLPFSESRCHPQLLRLE---SQMEVDSSSHVDDRRENNSAELHESD 405

Query: 174 VLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQLS 353
            + R +KL+  N++ +E SWLD+IIW+ +E   KPKLILDLQD QMLFEILD+  S  L 
Sbjct: 406 AVRRFSKLTLQNRDLMEGSWLDNIIWEPNETNIKPKLILDLQDKQMLFEILDHRDSKHLQ 465

Query: 354 -HAGAIIISR 380
            HAGA+II+R
Sbjct: 466 LHAGAMIITR 475


>ref|XP_002273712.2| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Vitis vinifera]
          Length = 2068

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 58/137 (42%), Positives = 80/137 (58%), Gaps = 7/137 (5%)
 Frame = +3

Query: 3   LVESFGSRSFSIPRFNKACDVTCLPQSNGSEL-----NSKRVLLSSTESVTDKR-SEAVS 164
           L+E+FGSR+ S    +   ++   PQ    E      NS +  +   +++ D R SEA+ 
Sbjct: 585 LIEAFGSRNSSALINHSLSEIKYHPQLLRLETRLEMDNSSQSAVRKEDAIEDPRGSEAIR 644

Query: 165 KDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSD 344
                 R NKL+  N++ LE SW+D IIW+  + I KPKLILDLQD+QMLFEILD     
Sbjct: 645 ------RFNKLTLQNRDMLEGSWVDRIIWEPHKPISKPKLILDLQDEQMLFEILDDKDGK 698

Query: 345 QLS-HAGAIIISRPQPS 392
            L  HAGA++I+RP  S
Sbjct: 699 NLGLHAGAMLITRPVKS 715


>gb|EMS63019.1| Transcription initiation factor TFIID subunit 1 [Triticum urartu]
          Length = 1743

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/66 (68%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
 Frame = +3

Query: 186 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQL-SHAG 362
           L+ LS LNKE LE SWLD+IIWD  E+ PKPKLI+DL+DDQMLFEILD    D L SHA 
Sbjct: 477 LSNLSLLNKELLEGSWLDNIIWDHSEDAPKPKLIMDLKDDQMLFEILDEENRDHLRSHAF 536

Query: 363 AIIISR 380
           A+I+SR
Sbjct: 537 AMIVSR 542


>ref|XP_004288581.1| PREDICTED: transcription initiation factor TFIID subunit 1-A-like
           [Fragaria vesca subsp. vesca]
          Length = 1851

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 7/137 (5%)
 Frame = +3

Query: 3   LVESFGSRSFSIPRFNKACDVTCLPQSNGS------ELNSKRVLLSSTESVTDKRSEAVS 164
           L+E FG R+FS           CL  S+G        L S+  +    +   D   E + 
Sbjct: 391 LLEPFGPRNFS--------GSPCLNLSDGRYHPQLLRLESRCEVEDHADGRVDNSGEKLH 442

Query: 165 KDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSD 344
           K   +   +K SS N++ LE SWLD IIWD D  I KPKLILDL+D+QMLFEI D    +
Sbjct: 443 KGHTVRHFSKHSSKNRDILEGSWLDQIIWDPDIPIRKPKLILDLEDEQMLFEISDNKDCE 502

Query: 345 QLS-HAGAIIISRPQPS 392
            L  H+GA+I++RP  S
Sbjct: 503 HLKLHSGAMIVTRPLKS 519


>ref|XP_006366188.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X3 [Solanum tuberosum]
          Length = 1856

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = +3

Query: 90  SELNSKRVLLSSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENI 269
           S LN+ R    ST++  D+ ++ +     L R +KL+  N++ LE SW+D+IIW+ D+  
Sbjct: 461 SRLNADRQ--RSTDTPKDEDTDEILSSDALRRFSKLTLQNRDILEESWVDNIIWEPDQPF 518

Query: 270 PKPKLILDLQDDQMLFEILDYTVSDQLS-HAGAIIIS-RPQPSMEDS 404
           PKPKLI DLQD+QMLFE+LD     QL  HAGA+I +   +PS  DS
Sbjct: 519 PKPKLIYDLQDEQMLFEVLDNRDGQQLMLHAGAMITTGLVKPSSGDS 565


>ref|XP_006366187.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X2 [Solanum tuberosum]
          Length = 1857

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = +3

Query: 90  SELNSKRVLLSSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENI 269
           S LN+ R    ST++  D+ ++ +     L R +KL+  N++ LE SW+D+IIW+ D+  
Sbjct: 461 SRLNADRQ--RSTDTPKDEDTDEILSSDALRRFSKLTLQNRDILEESWVDNIIWEPDQPF 518

Query: 270 PKPKLILDLQDDQMLFEILDYTVSDQLS-HAGAIIIS-RPQPSMEDS 404
           PKPKLI DLQD+QMLFE+LD     QL  HAGA+I +   +PS  DS
Sbjct: 519 PKPKLIYDLQDEQMLFEVLDNRDGQQLMLHAGAMITTGLVKPSSGDS 565


>ref|XP_006366186.1| PREDICTED: transcription initiation factor TFIID subunit 1-like
           isoform X1 [Solanum tuberosum]
          Length = 1858

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 49/107 (45%), Positives = 69/107 (64%), Gaps = 2/107 (1%)
 Frame = +3

Query: 90  SELNSKRVLLSSTESVTDKRSEAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENI 269
           S LN+ R    ST++  D+ ++ +     L R +KL+  N++ LE SW+D+IIW+ D+  
Sbjct: 461 SRLNADRQ--RSTDTPKDEDTDEILSSDALRRFSKLTLQNRDILEESWVDNIIWEPDQPF 518

Query: 270 PKPKLILDLQDDQMLFEILDYTVSDQLS-HAGAIIIS-RPQPSMEDS 404
           PKPKLI DLQD+QMLFE+LD     QL  HAGA+I +   +PS  DS
Sbjct: 519 PKPKLIYDLQDEQMLFEVLDNRDGQQLMLHAGAMITTGLVKPSSGDS 565


>gb|EMT07789.1| hypothetical protein F775_06671 [Aegilops tauschii]
          Length = 615

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 44/65 (67%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
 Frame = +3

Query: 186 LNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQL-SHAG 362
           L+ LS LNKE LE SWLD+IIWD  E+ PKPKLI+DL+DDQMLFEILD    D L SHA 
Sbjct: 465 LSNLSLLNKELLEGSWLDNIIWDHSEDAPKPKLIMDLKDDQMLFEILDEENGDHLRSHAF 524

Query: 363 AIIIS 377
           A+I+S
Sbjct: 525 AMIVS 529


>gb|AFW87279.1| hypothetical protein ZEAMMB73_604430 [Zea mays]
          Length = 659

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
 Frame = +3

Query: 153 EAVSKDGVLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDY 332
           +AV  D ++ RLN LS LN+E LE SWLD+IIWD +E  PKPKLI DL+DD MLFEILD 
Sbjct: 508 DAVKIDTMV-RLNNLSVLNRELLEGSWLDNIIWDPNEVTPKPKLIFDLKDDHMLFEILDE 566

Query: 333 TVSDQL-SHAGAIIISR 380
              D L SHA A+I+S+
Sbjct: 567 KNVDHLQSHARAMIVSQ 583


>gb|EXB57308.1| Transcription initiation factor TFIID subunit 1-A [Morus notabilis]
          Length = 1993

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 3/138 (2%)
 Frame = +3

Query: 3   LVESFGSRSFSIPRFNKACDVTCLPQSNGSELNSKRVLLSSTESVTDKRSEA-VSKDGVL 179
           ++E FGS + S P      +    PQ    E   +    +  +  TDK +E  + +   +
Sbjct: 501 ILEDFGSETSSRPSSLTFSEGRYHPQLLRLESRLEVDNFNQDDGRTDKVNEKQLHQTNAV 560

Query: 180 GRLNKLSSLNKEFLESSWLDHIIWDSDENIPKPKLILDLQDDQMLFEILDYTVSDQLS-H 356
              NKL S N++ LE SWLD IIW+ D ++ KPKLI DLQD+QMLFEILD      L  H
Sbjct: 561 RNFNKLISQNRDMLEGSWLDAIIWEQDTHVRKPKLIFDLQDEQMLFEILDDKDDKNLRLH 620

Query: 357 AGAIIISRP-QPSMEDSL 407
           AGA++I+R  + S  DSL
Sbjct: 621 AGAMVITRSVKSSYGDSL 638


>emb|CBI21835.3| unnamed protein product [Vitis vinifera]
          Length = 1798

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 5/100 (5%)
 Frame = +3

Query: 108 RVLLSSTESVTDKRSEAVSKDG----VLGRLNKLSSLNKEFLESSWLDHIIWDSDENIPK 275
           +++  ++  V+D  +E+    G     + R NKL+  N++ LE SW+D IIW+  + I K
Sbjct: 346 KIIWDNSPEVSDNSAESCEISGPDSEAIRRFNKLTLQNRDMLEGSWVDRIIWEPHKPISK 405

Query: 276 PKLILDLQDDQMLFEILDYTVSDQLS-HAGAIIISRPQPS 392
           PKLILDLQD+QMLFEILD      L  HAGA++I+RP  S
Sbjct: 406 PKLILDLQDEQMLFEILDDKDGKNLGLHAGAMLITRPVKS 445