BLASTX nr result

ID: Zingiber24_contig00040793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040793
         (598 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006477628.1| PREDICTED: zinc finger protein ZAT4-like [Ci...    60   4e-07
ref|XP_006440700.1| hypothetical protein CICLE_v10019977mg [Citr...    60   6e-07
emb|CBI16587.3| unnamed protein product [Vitis vinifera]               57   5e-06

>ref|XP_006477628.1| PREDICTED: zinc finger protein ZAT4-like [Citrus sinensis]
          Length = 476

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 60/174 (34%), Positives = 77/174 (44%), Gaps = 13/174 (7%)
 Frame = +3

Query: 6   SFSSSEHEREDADGAIGLMMLSRDC--RCWAXXXXXXXXXXXXXXEFHLPRKGIKKMEYS 179
           S S SE E+E  + A+ LMMLSRD   R                 E  +  K +K+ +  
Sbjct: 175 SSSVSEIEQEQEEVAMCLMMLSRDVGSRGILNSVAESSDNNSVYLEPEIEAKKLKEKKL- 233

Query: 180 DDQLVGDLDSLKNQTIYPFPAEIKCSSCEE-SGKGFPNKKDRRSNSDSISLGAT------ 338
           D +    + +LK  T     AE+  S     S K   N  D    SDS+    T      
Sbjct: 234 DSEKAKVIKNLKKDTELD-QAELGSSKQNSTSKKNVCNSFDPELRSDSLKRSTTDASDAE 292

Query: 339 FQLDDQ-RSQFQCADCKNTF---QALGGHRASHKKTNCCPRSKMDSARGIANEE 488
           F  D Q RS+F+CA C   F   QALGGHRASHKK   C  +K+DS+      E
Sbjct: 293 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE 346


>ref|XP_006440700.1| hypothetical protein CICLE_v10019977mg [Citrus clementina]
           gi|557542962|gb|ESR53940.1| hypothetical protein
           CICLE_v10019977mg [Citrus clementina]
          Length = 476

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 60/174 (34%), Positives = 76/174 (43%), Gaps = 13/174 (7%)
 Frame = +3

Query: 6   SFSSSEHEREDADGAIGLMMLSRDCRCWAXXXXXXXXXXXXXXEFHLPRKGIKKMEYS-- 179
           S S SE E+E  + A+ LMMLSRD                    F  P+   KK++    
Sbjct: 175 SSSVSEIEQEQEEVAMCLMMLSRDVGSRGVLNSVAESSDNNSV-FLEPKIEAKKLKEKKL 233

Query: 180 DDQLVGDLDSLKNQTIYPFPAEIKCSSCEE-SGKGFPNKKDRRSNSDSISLGAT------ 338
           D +    + +LK +T     AE+  S     S K   N  D    SDS     T      
Sbjct: 234 DSEKAKVIKNLKKETELD-QAELGSSKQNSTSKKNVCNSFDPELRSDSFKRSTTDASDAE 292

Query: 339 FQLDDQ-RSQFQCADCKNTF---QALGGHRASHKKTNCCPRSKMDSARGIANEE 488
           F  D Q RS+F+CA C   F   QALGGHRASHKK   C  +K+DS+      E
Sbjct: 293 FYKDSQKRSKFECATCNKIFHSYQALGGHRASHKKIKGCFATKIDSSENSIEAE 346


>emb|CBI16587.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
 Frame = +3

Query: 252 CSSCEESGKGFPNKKD-----RRSNSDSISLGATFQLD--DQRSQFQCADCKNTF---QA 401
           C  CE  GK F + K      + ++ D+ SL ++   D  D+   F+C  CK  F   QA
Sbjct: 103 CRVCENCGKEFLSWKSFLEHGKCNSDDAESLVSSPGSDGEDESWMFECKACKKVFNSHQA 162

Query: 402 LGGHRASHKKTNCCPRSKMDSA-RGIANEETVDGDEVSEASFGSTKKRCH 548
           LGGHRASHKK   C  +++D     +A+E+ +  DE S  S       CH
Sbjct: 163 LGGHRASHKKVKGCFAARLDHMDESLADEDVITHDEFSRKSKVHECSICH 212


Top