BLASTX nr result

ID: Zingiber24_contig00040505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040505
         (1035 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513591.1| conserved hypothetical protein [Ricinus comm...    60   2e-06
ref|XP_002313866.2| hypothetical protein POPTR_0009s10030g [Popu...    59   4e-06

>ref|XP_002513591.1| conserved hypothetical protein [Ricinus communis]
           gi|223547499|gb|EEF48994.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 638

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 9/125 (7%)
 Frame = -3

Query: 385 PTKDKENPKFLGLIVISDNDDER--RAEDCEVKKHSAERTLDIKND----STLCKNPEML 224
           PT    N   L +I I D+DDE   R     +      R + I  D     TL    +M+
Sbjct: 265 PTPVGGNSDHLNVIDICDSDDESDIRGIHLSIPNDDGNRKVCISTDHVLTGTLNGKQDMI 324

Query: 223 HSDASRRVVGVQDFDEN---HPDGVLLIPTPKRKRVSRVFTSDSEKDDDADNIPIGKLWS 53
             + S RVV  QD++E+     D V   PT KRKR + + TSDSE  D+ D+IPI KL  
Sbjct: 325 SDNCSGRVVVSQDYEEDLDDFKDNVPCPPTSKRKRAANIVTSDSE-SDEGDDIPISKLKK 383

Query: 52  MQAKE 38
           +  +E
Sbjct: 384 VHLQE 388


>ref|XP_002313866.2| hypothetical protein POPTR_0009s10030g [Populus trichocarpa]
           gi|550331421|gb|EEE87821.2| hypothetical protein
           POPTR_0009s10030g [Populus trichocarpa]
          Length = 816

 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 52/181 (28%), Positives = 66/181 (36%), Gaps = 7/181 (3%)
 Frame = +1

Query: 439 SDPASQPPAVKPS------PATPCISSSSNPHYRAPATRAKSQSSPEISAPFLSQLYKLP 600
           S P+  PP   PS      P +P   S S P    P T   S S P  S P  +      
Sbjct: 344 STPSPTPPTTTPSSPSPTPPTSPSPPSQSTPSPTPPTTTPSSPSPPSSSTPSPT------ 397

Query: 601 LT*GFPPRGTQNLSYVAYQSLQGPESSTLTRSISLPYPAASAGDLTCRNGNSPRSFSVAA 780
                PP  T        QS   P   T T S   P P  +         +SP   S + 
Sbjct: 398 -----PPTTTPTSPSPPSQSTPSPTPPTTTPSSPSPTPPTTTP-------SSPSPPSQST 445

Query: 781 PVQLACSSNPPNPARGLHSXXXXXXXXXXSQSTPPRIS-SPLRPSVTPPSTSERSAPPGS 957
           P     ++ PP+P+               S STPP  + SP  P+ TPP+T    +PP S
Sbjct: 446 PSPTPPTTTPPSPS-------------PQSSSTPPNTTASPSTPTPTPPTTPSNPSPPSS 492

Query: 958 P 960
           P
Sbjct: 493 P 493


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