BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040488
         (251 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containi...    60   3e-07
ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containi...    58   1e-06
ref|XP_002531339.1| pentatricopeptide repeat-containing protein,...    57   2e-06
ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citr...    57   3e-06
ref|XP_006403663.1| hypothetical protein EUTSA_v10010142mg [Eutr...    57   3e-06
ref|XP_006292855.1| hypothetical protein CARUB_v10019115mg [Caps...    57   3e-06
ref|NP_190938.1| protein MATERNAL EFFECT EMBRYO ARREST 40 [Arabi...    57   3e-06
ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arab...    57   3e-06
gb|EOY07590.1| Pentatricopeptide repeat (PPR) superfamily protei...    56   4e-06
gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocar...    56   4e-06
emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]               55   1e-05

>ref|XP_004305215.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 761

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/69 (44%), Positives = 43/69 (62%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTTFDXXXXXXX 71
           MLAEGL +L MED L K+  +IMEKA +SD+E S ++  L++RKF+DAL T         
Sbjct: 693 MLAEGLYALSMEDTLIKLVDMIMEKARVSDSEASMIRGFLKIRKFKDALATLGGILNSQR 752

Query: 70  XXXXSWTQS 44
                WT++
Sbjct: 753 PRKSYWTRN 761


>ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
           gi|449525343|ref|XP_004169677.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/51 (54%), Positives = 39/51 (76%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTT 98
           MLAEGL +L M+D L K+  +IMEKA  S+ E ST++  L++RKF+DAL+T
Sbjct: 699 MLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREISTIRGFLKIRKFQDALST 749


>ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529061|gb|EEF31046.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 630

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/51 (56%), Positives = 37/51 (72%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTT 98
           MLAEGL SL MED L K+  L+MEKA+ S NE   ++  L++RKF+DAL T
Sbjct: 565 MLAEGLCSLSMEDTLIKLVDLVMEKANFSQNEVVMIRGFLKIRKFQDALAT 615


>ref|XP_006429052.1| hypothetical protein CICLE_v10013605mg [Citrus clementina]
           gi|568854342|ref|XP_006480788.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Citrus sinensis]
           gi|557531109|gb|ESR42292.1| hypothetical protein
           CICLE_v10013605mg [Citrus clementina]
          Length = 768

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/52 (51%), Positives = 39/52 (75%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTTF 95
           MLAEGL+SLG E+ L ++  ++M+KA  SD E S ++  L++RKF+DAL TF
Sbjct: 697 MLAEGLVSLGKEETLVELIDMVMDKAKFSDRETSMVRGFLKIRKFQDALATF 748


>ref|XP_006403663.1| hypothetical protein EUTSA_v10010142mg [Eutrema salsugineum]
           gi|557104782|gb|ESQ45116.1| hypothetical protein
           EUTSA_v10010142mg [Eutrema salsugineum]
          Length = 754

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTT 98
           MLAEGL++L ME+ L K+  ++M+KA  S+ E S +K LL++RKF+DAL T
Sbjct: 687 MLAEGLLTLSMEETLVKLMNMVMQKAKFSEEEVSMVKGLLKIRKFQDALAT 737


>ref|XP_006292855.1| hypothetical protein CARUB_v10019115mg [Capsella rubella]
           gi|482561562|gb|EOA25753.1| hypothetical protein
           CARUB_v10019115mg [Capsella rubella]
          Length = 754

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTT 98
           MLAEGL++L ME+ L K+  ++M+KA  S+ E S +K LL++RKF+DAL T
Sbjct: 687 MLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALAT 737


>ref|NP_190938.1| protein MATERNAL EFFECT EMBRYO ARREST 40 [Arabidopsis thaliana]
           gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
           gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis
           thaliana] gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400
           [Arabidopsis thaliana] gi|332645608|gb|AEE79129.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 754

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTT 98
           MLAEGL++L ME+ L K+  ++M+KA  S+ E S +K LL++RKF+DAL T
Sbjct: 687 MLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALAT 737


>ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata] gi|297322059|gb|EFH52480.1| hypothetical protein
           ARALYDRAFT_906766 [Arabidopsis lyrata subsp. lyrata]
          Length = 754

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTT 98
           MLAEGL++L ME+ L K+  ++M+KA  S+ E S +K LL++RKF+DAL T
Sbjct: 687 MLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALAT 737


>gb|EOY07590.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 752

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/49 (57%), Positives = 37/49 (75%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDAL 104
           MLAEGL SL MED L K+  ++MEKA+ SD+E S ++  L +RKF+DAL
Sbjct: 685 MLAEGLCSLSMEDTLVKLIDMVMEKANCSDSEVSIIRGFLRIRKFQDAL 733


>gb|AGG38110.1| maternal effect embryo arrest 40 protein [Dimocarpus longan]
          Length = 763

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTTF 95
           MLAEGL SL MED L  +  ++M+KA  S+NE S ++  L++RK+ DAL TF
Sbjct: 696 MLAEGLCSLSMEDTLVDLVDMVMDKAKFSNNEVSMIRGFLKIRKYHDALATF 747


>emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = -2

Query: 250 MLAEGLISLGMEDDLHKVALLIMEKASLSDNEFSTLKSLLEMRKFRDALTTF 95
           MLAEGL++LGM+D   +   +I+EKA L D++ S ++  L++RKF DAL TF
Sbjct: 681 MLAEGLLNLGMDDYFIRAIEIIIEKADLGDSDVSAIRGYLKIRKFYDALATF 732