BLASTX nr result
ID: Zingiber24_contig00040436
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00040436
(319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002458423.1| hypothetical protein SORBIDRAFT_03g033240 [S... 65 1e-08
ref|XP_002461929.1| hypothetical protein SORBIDRAFT_02g010740 [S... 65 1e-08
ref|XP_004951795.1| PREDICTED: RNA-binding protein 5-A-like isof... 64 2e-08
ref|XP_004951794.1| PREDICTED: RNA-binding protein 5-A-like isof... 64 2e-08
ref|XP_004951793.1| PREDICTED: RNA-binding protein 5-A-like isof... 64 2e-08
ref|XP_004951792.1| PREDICTED: RNA-binding protein 5-A-like isof... 64 2e-08
tpg|DAA60465.1| TPA: hypothetical protein ZEAMMB73_326515 [Zea m... 64 2e-08
dbj|BAD26240.1| putative RNA-binding protein 10 [Oryza sativa Ja... 62 1e-07
ref|XP_003569330.1| PREDICTED: uncharacterized protein LOC100845... 62 1e-07
gb|EEC72564.1| hypothetical protein OsI_05999 [Oryza sativa Indi... 62 1e-07
ref|XP_002305898.2| hypothetical protein POPTR_0004s08000g [Popu... 61 2e-07
gb|AFW83782.1| hypothetical protein ZEAMMB73_367145 [Zea mays] 61 2e-07
gb|AFW83778.1| hypothetical protein ZEAMMB73_367145, partial [Ze... 61 2e-07
ref|XP_002532972.1| RNA-binding protein, putative [Ricinus commu... 61 2e-07
ref|XP_006372488.1| zinc finger family protein [Populus trichoca... 60 2e-07
ref|XP_002301651.1| predicted protein [Populus trichocarpa] 60 2e-07
ref|XP_002327561.1| predicted protein [Populus trichocarpa] 60 2e-07
ref|XP_006646925.1| PREDICTED: RNA-binding protein 5-like isofor... 59 5e-07
ref|XP_006646924.1| PREDICTED: RNA-binding protein 5-like isofor... 59 5e-07
ref|XP_006481941.1| PREDICTED: RNA-binding protein 5-like isofor... 59 5e-07
>ref|XP_002458423.1| hypothetical protein SORBIDRAFT_03g033240 [Sorghum bicolor]
gi|241930398|gb|EES03543.1| hypothetical protein
SORBIDRAFT_03g033240 [Sorghum bicolor]
Length = 1001
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK DPSLEAQAGDSY+TIIQKKAMARF++M+
Sbjct: 967 GSQQRKADPSLEAQAGDSYKTIIQKKAMARFKEMS 1001
>ref|XP_002461929.1| hypothetical protein SORBIDRAFT_02g010740 [Sorghum bicolor]
gi|241925306|gb|EER98450.1| hypothetical protein
SORBIDRAFT_02g010740 [Sorghum bicolor]
Length = 943
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK DPSLEAQAGDSY+TIIQKKAMARF++M+
Sbjct: 909 GSQQRKADPSLEAQAGDSYKTIIQKKAMARFKEMS 943
>ref|XP_004951795.1| PREDICTED: RNA-binding protein 5-A-like isoform X4 [Setaria italica]
Length = 991
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK DPSLEAQAGDSY+TIIQKKA+ARFR+M+
Sbjct: 957 GSQQRKADPSLEAQAGDSYKTIIQKKAIARFREMS 991
>ref|XP_004951794.1| PREDICTED: RNA-binding protein 5-A-like isoform X3 [Setaria italica]
Length = 999
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK DPSLEAQAGDSY+TIIQKKA+ARFR+M+
Sbjct: 965 GSQQRKADPSLEAQAGDSYKTIIQKKAIARFREMS 999
>ref|XP_004951793.1| PREDICTED: RNA-binding protein 5-A-like isoform X2 [Setaria italica]
Length = 1036
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK DPSLEAQAGDSY+TIIQKKA+ARFR+M+
Sbjct: 1002 GSQQRKADPSLEAQAGDSYKTIIQKKAIARFREMS 1036
>ref|XP_004951792.1| PREDICTED: RNA-binding protein 5-A-like isoform X1 [Setaria italica]
Length = 1037
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK DPSLEAQAGDSY+TIIQKKA+ARFR+M+
Sbjct: 1003 GSQQRKADPSLEAQAGDSYKTIIQKKAIARFREMS 1037
>tpg|DAA60465.1| TPA: hypothetical protein ZEAMMB73_326515 [Zea mays]
Length = 988
Score = 64.3 bits (155), Expect = 2e-08
Identities = 30/35 (85%), Positives = 34/35 (97%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK DPSLEAQAGDSY+TIIQKKAMARF++M+
Sbjct: 954 GSQQRKPDPSLEAQAGDSYKTIIQKKAMARFKEMS 988
>dbj|BAD26240.1| putative RNA-binding protein 10 [Oryza sativa Japonica Group]
Length = 928
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/36 (86%), Positives = 35/36 (97%), Gaps = 1/36 (2%)
Frame = -3
Query: 317 GSQQRKT-DPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK+ DPSLEAQAGDSY+TIIQKKAMARFR+M+
Sbjct: 893 GSQQRKSSDPSLEAQAGDSYKTIIQKKAMARFREMS 928
>ref|XP_003569330.1| PREDICTED: uncharacterized protein LOC100845190 [Brachypodium
distachyon]
Length = 921
Score = 61.6 bits (148), Expect = 1e-07
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQ+K DPSLEA+AGDSY+TIIQKKA+ARFR+M+
Sbjct: 887 GSQQKKADPSLEARAGDSYKTIIQKKAIARFREMS 921
>gb|EEC72564.1| hypothetical protein OsI_05999 [Oryza sativa Indica Group]
gi|222622250|gb|EEE56382.1| hypothetical protein
OsJ_05526 [Oryza sativa Japonica Group]
Length = 1061
Score = 61.6 bits (148), Expect = 1e-07
Identities = 31/36 (86%), Positives = 35/36 (97%), Gaps = 1/36 (2%)
Frame = -3
Query: 317 GSQQRKT-DPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK+ DPSLEAQAGDSY+TIIQKKAMARFR+M+
Sbjct: 1026 GSQQRKSSDPSLEAQAGDSYKTIIQKKAMARFREMS 1061
>ref|XP_002305898.2| hypothetical protein POPTR_0004s08000g [Populus trichocarpa]
gi|550340573|gb|EEE86409.2| hypothetical protein
POPTR_0004s08000g [Populus trichocarpa]
Length = 948
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQ+K DPSLE QAGDSY+T+IQKKA+ARFR+M+
Sbjct: 914 GSQQKKLDPSLEVQAGDSYKTLIQKKALARFREMS 948
>gb|AFW83782.1| hypothetical protein ZEAMMB73_367145 [Zea mays]
Length = 998
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK DP LEA+AGDSY+TIIQKKAMARF++M+
Sbjct: 964 GSQQRKADPILEAKAGDSYKTIIQKKAMARFKEMS 998
>gb|AFW83778.1| hypothetical protein ZEAMMB73_367145, partial [Zea mays]
Length = 76
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/35 (80%), Positives = 33/35 (94%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQRK DP LEA+AGDSY+TIIQKKAMARF++M+
Sbjct: 42 GSQQRKADPILEAKAGDSYKTIIQKKAMARFKEMS 76
>ref|XP_002532972.1| RNA-binding protein, putative [Ricinus communis]
gi|223527250|gb|EEF29409.1| RNA-binding protein, putative
[Ricinus communis]
Length = 962
Score = 60.8 bits (146), Expect = 2e-07
Identities = 27/35 (77%), Positives = 33/35 (94%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQ+K DPSLE QAGDSY+T+IQKKA+ARFR+M+
Sbjct: 925 GSQQKKLDPSLEVQAGDSYKTLIQKKALARFREMS 959
>ref|XP_006372488.1| zinc finger family protein [Populus trichocarpa]
gi|550319114|gb|ERP50285.1| zinc finger family protein
[Populus trichocarpa]
Length = 988
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDM 216
GSQQ+K DPSLE QAGDSY+T+IQKKA+ARFR+M
Sbjct: 955 GSQQKKLDPSLEVQAGDSYKTLIQKKALARFREM 988
>ref|XP_002301651.1| predicted protein [Populus trichocarpa]
Length = 463
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDM 216
GSQQ+K DPSLE QAGDSY+T+IQKKA+ARFR+M
Sbjct: 430 GSQQKKLDPSLEVQAGDSYKTLIQKKALARFREM 463
>ref|XP_002327561.1| predicted protein [Populus trichocarpa]
Length = 988
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDM 216
GSQQ+K DPSLE QAGDSY+T+IQKKA+ARFR+M
Sbjct: 955 GSQQKKLDPSLEVQAGDSYKTLIQKKALARFREM 988
>ref|XP_006646925.1| PREDICTED: RNA-binding protein 5-like isoform X2 [Oryza brachyantha]
Length = 996
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/36 (83%), Positives = 34/36 (94%), Gaps = 1/36 (2%)
Frame = -3
Query: 317 GSQQR-KTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQR K DPSLEAQAGDSY+TIIQKKA+ARFR+M+
Sbjct: 961 GSQQRVKPDPSLEAQAGDSYKTIIQKKAIARFREMS 996
>ref|XP_006646924.1| PREDICTED: RNA-binding protein 5-like isoform X1 [Oryza brachyantha]
Length = 997
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/36 (83%), Positives = 34/36 (94%), Gaps = 1/36 (2%)
Frame = -3
Query: 317 GSQQR-KTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQR K DPSLEAQAGDSY+TIIQKKA+ARFR+M+
Sbjct: 962 GSQQRVKPDPSLEAQAGDSYKTIIQKKAIARFREMS 997
>ref|XP_006481941.1| PREDICTED: RNA-binding protein 5-like isoform X2 [Citrus sinensis]
Length = 1046
Score = 59.3 bits (142), Expect = 5e-07
Identities = 26/35 (74%), Positives = 32/35 (91%)
Frame = -3
Query: 317 GSQQRKTDPSLEAQAGDSYRTIIQKKAMARFRDMA 213
GSQQ+K DPSLE QAGDSY+T+I KKA+ARFR+M+
Sbjct: 1012 GSQQKKVDPSLEVQAGDSYKTLIHKKALARFREMS 1046