BLASTX nr result
ID: Zingiber24_contig00040395
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00040395
(202 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g1... 90 4e-16
dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japo... 87 2e-15
gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indi... 87 2e-15
ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group] g... 87 2e-15
gb|EMT29820.1| E3 ubiquitin-protein ligase [Aegilops tauschii] 87 2e-15
gb|EMS53710.1| hypothetical protein TRIUR3_16496 [Triticum urartu] 87 2e-15
ref|NP_001169753.1| uncharacterized LOC100383634 [Zea mays] gi|2... 87 3e-15
ref|XP_004954169.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 86 4e-15
gb|ESW33256.1| hypothetical protein PHAVU_001G055600g [Phaseolus... 86 5e-15
ref|XP_006648026.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 86 7e-15
ref|XP_006283708.1| hypothetical protein CARUB_v10004779mg [Caps... 86 7e-15
ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 86 7e-15
ref|XP_006412451.1| hypothetical protein EUTSA_v10025242mg [Eutr... 85 1e-14
gb|EPS64040.1| hypothetical protein M569_10741, partial [Genlise... 85 1e-14
ref|XP_006596122.1| PREDICTED: E3 ubiquitin-protein ligase At1g1... 84 1e-14
ref|XP_003545507.2| PREDICTED: E3 ubiquitin-protein ligase At1g1... 84 1e-14
gb|EXC20793.1| E3 ubiquitin-protein ligase [Morus notabilis] 84 2e-14
ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thal... 84 2e-14
emb|CAA18601.1| putative protein [Arabidopsis thaliana] gi|72701... 84 2e-14
ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arab... 84 3e-14
>ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/66 (62%), Positives = 52/66 (78%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPC IS+MG R+DT + RGATSESIN LP+YKFK+++++ +D + GGIL
Sbjct: 263 MICCCLPCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHGSGNDAEG-QDGGIL 321
Query: 183 AAGTDK 200
AAGTDK
Sbjct: 322 AAGTDK 327
>dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger
protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 199
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPC IS+MG R+DT + RGATSESIN LP+YKFK+++++ ++ + GGI+
Sbjct: 55 MICCCLPCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHSSGNEAEG-QDGGIV 113
Query: 183 AAGTDK 200
AAGTDK
Sbjct: 114 AAGTDK 119
>gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein
OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPC IS+MG R+DT + RGATSESIN LP+YKFK+++++ ++ + GGI+
Sbjct: 254 MICCCLPCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHSSGNEAEG-QDGGIV 312
Query: 183 AAGTDK 200
AAGTDK
Sbjct: 313 AAGTDK 318
>ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial
[Oryza sativa Japonica Group]
Length = 342
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPC IS+MG R+DT + RGATSESIN LP+YKFK+++++ ++ + GGI+
Sbjct: 198 MICCCLPCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHSSGNEAEG-QDGGIV 256
Query: 183 AAGTDK 200
AAGTDK
Sbjct: 257 AAGTDK 262
>gb|EMT29820.1| E3 ubiquitin-protein ligase [Aegilops tauschii]
Length = 609
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/66 (60%), Positives = 52/66 (78%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPC IS+MG R+DT + RGATSESIN LP+YKFK+++++ G+ + GGI+
Sbjct: 255 MICCCLPCIISVMGFREDTNNTRGATSESINTLPTYKFKTKKRR-HGSGNEAEGQEGGIV 313
Query: 183 AAGTDK 200
AAGTDK
Sbjct: 314 AAGTDK 319
>gb|EMS53710.1| hypothetical protein TRIUR3_16496 [Triticum urartu]
Length = 409
Score = 87.0 bits (214), Expect = 2e-15
Identities = 40/66 (60%), Positives = 52/66 (78%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPC IS+MG R+DT + RGATSESIN LP+YKFK+++++ G+ + GGI+
Sbjct: 255 MICCCLPCIISVMGFREDTNNTRGATSESINTLPTYKFKTKKRR-HGSGNEAEGQEGGIV 313
Query: 183 AAGTDK 200
AAGTDK
Sbjct: 314 AAGTDK 319
>ref|NP_001169753.1| uncharacterized LOC100383634 [Zea mays] gi|223975755|gb|ACN32065.1|
unknown [Zea mays] gi|224031459|gb|ACN34805.1| unknown
[Zea mays] gi|413939252|gb|AFW73803.1| putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPC ISIMG R+DT + RGA+SESIN LP+YKFK ++++ S+ + GGIL
Sbjct: 257 MICCCLPCIISIMGFREDTNNTRGASSESINALPTYKFKIKKRRHGSGSETEG-QEGGIL 315
Query: 183 AAGTDK 200
AAGTDK
Sbjct: 316 AAGTDK 321
>ref|XP_004954169.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Setaria
italica]
Length = 406
Score = 86.3 bits (212), Expect = 4e-15
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPC IS+MG R+DT + RGATSESIN LP+YKFK+++++ S+ + GGI+
Sbjct: 262 MICCCLPCIISVMGFREDTNNTRGATSESINALPTYKFKTKKRRHGSGSEAEG-QEGGIV 320
Query: 183 AAGTDK 200
AAGT+K
Sbjct: 321 AAGTEK 326
>gb|ESW33256.1| hypothetical protein PHAVU_001G055600g [Phaseolus vulgaris]
Length = 415
Score = 85.9 bits (211), Expect = 5e-15
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC ISI+G+R+D P RGATSESIN LP+YKFK ++ K G + + GG++A
Sbjct: 268 ICCCLPCIISILGVREDMPQNRGATSESINALPTYKFKMKKNKKNGEG---NSTEGGVVA 324
Query: 186 AGTDK 200
AGT+K
Sbjct: 325 AGTEK 329
>ref|XP_006648026.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Oryza
brachyantha]
Length = 399
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/66 (59%), Positives = 51/66 (77%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPC IS+MG R+DT + RGATSESIN LP+YKFK+++++ ++ GGI+
Sbjct: 257 MICCCLPCIISVMGFREDTNNTRGATSESINSLPTYKFKTKKRRHGNEAE---GQDGGIV 313
Query: 183 AAGTDK 200
AAGTDK
Sbjct: 314 AAGTDK 319
>ref|XP_006283708.1| hypothetical protein CARUB_v10004779mg [Capsella rubella]
gi|482552413|gb|EOA16606.1| hypothetical protein
CARUB_v10004779mg [Capsella rubella]
Length = 454
Score = 85.5 bits (210), Expect = 7e-15
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC ISI+G R+D RGAT ESIN LP++KFK ++ +S G+ + S S GG++A
Sbjct: 287 ICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSSGDDNGSSTSEGGVVA 346
Query: 186 AGTDK 200
AGTDK
Sbjct: 347 AGTDK 351
>ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X1
[Glycine max] gi|571449542|ref|XP_006578174.1|
PREDICTED: E3 ubiquitin-protein ligase At1g12760-like
isoform X2 [Glycine max]
Length = 385
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC ISI+G+R+D RGA+SESIN LP+YKFK +R KS+G S+ + GG++A
Sbjct: 236 ICCCLPCIISILGVREDMAQTRGASSESINALPTYKFKMKRNKSKGESN-SAVGEGGVVA 294
Query: 186 AGTDK 200
AGT+K
Sbjct: 295 AGTEK 299
>ref|XP_006412451.1| hypothetical protein EUTSA_v10025242mg [Eutrema salsugineum]
gi|557113621|gb|ESQ53904.1| hypothetical protein
EUTSA_v10025242mg [Eutrema salsugineum]
Length = 435
Score = 84.7 bits (208), Expect = 1e-14
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC ISI+G R+D RGAT ESIN LP++KFK ++ +S G+ + S+S GG++A
Sbjct: 276 ICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSSGDGNGSSNSEGGVVA 335
Query: 186 AGTD 197
AGTD
Sbjct: 336 AGTD 339
>gb|EPS64040.1| hypothetical protein M569_10741, partial [Genlisea aurea]
Length = 334
Score = 84.7 bits (208), Expect = 1e-14
Identities = 37/66 (56%), Positives = 49/66 (74%)
Frame = +3
Query: 3 MICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGIL 182
MICCCLPCFISI+G R+D RGAT +SIN LP+YKFK ++ ++ + S + GGI+
Sbjct: 260 MICCCLPCFISILGFREDMNQNRGATQDSINSLPTYKFKVKKHRNDKENTSTSSTEGGIV 319
Query: 183 AAGTDK 200
AAGT+K
Sbjct: 320 AAGTEK 325
>ref|XP_006596122.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2
[Glycine max]
Length = 418
Score = 84.3 bits (207), Expect = 1e-14
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC ISI+G+R+D RGATSESIN LP YKFK ++ K GN + + + GG++A
Sbjct: 269 ICCCLPCIISILGVREDMSQNRGATSESINALPIYKFKMKKNKRNGNGN-SAAAEGGVVA 327
Query: 186 AGTDK 200
AGT+K
Sbjct: 328 AGTEK 332
>ref|XP_003545507.2| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X1
[Glycine max]
Length = 436
Score = 84.3 bits (207), Expect = 1e-14
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC ISI+G+R+D RGATSESIN LP YKFK ++ K GN + + + GG++A
Sbjct: 287 ICCCLPCIISILGVREDMSQNRGATSESINALPIYKFKMKKNKRNGNGN-SAAAEGGVVA 345
Query: 186 AGTDK 200
AGT+K
Sbjct: 346 AGTEK 350
>gb|EXC20793.1| E3 ubiquitin-protein ligase [Morus notabilis]
Length = 432
Score = 84.0 bits (206), Expect = 2e-14
Identities = 40/65 (61%), Positives = 47/65 (72%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC IS +G R+D RGATSESI+ LP+YKFK + K+R D D S GGI+A
Sbjct: 287 ICCCLPCIISALGFREDLTQNRGATSESIDALPTYKFKLK--KNRNGDDRDGASEGGIIA 344
Query: 186 AGTDK 200
AGTDK
Sbjct: 345 AGTDK 349
>ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis
thaliana] gi|19698907|gb|AAL91189.1| putative protein
[Arabidopsis thaliana] gi|20465641|gb|AAM20289.1|
unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger
protein [Arabidopsis thaliana]
Length = 453
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC ISI+G R+D RGAT ESIN LP++KFK ++ +S G+ + S S GG++A
Sbjct: 288 ICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVA 347
Query: 186 AGTD 197
AGTD
Sbjct: 348 AGTD 351
>emb|CAA18601.1| putative protein [Arabidopsis thaliana] gi|7270164|emb|CAB79977.1|
putative protein [Arabidopsis thaliana]
Length = 495
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC ISI+G R+D RGAT ESIN LP++KFK ++ +S G+ + S S GG++A
Sbjct: 288 ICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVA 347
Query: 186 AGTD 197
AGTD
Sbjct: 348 AGTD 351
>ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata] gi|297315097|gb|EFH45520.1| hypothetical protein
ARALYDRAFT_328473 [Arabidopsis lyrata subsp. lyrata]
Length = 489
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 6 ICCCLPCFISIMGMRDDTPHGRGATSESINELPSYKFKSRRQKSRGNSDFDSHSSGGILA 185
ICCCLPC ISI+G R+D RGAT ESIN LP++KFK ++ +S G+ + S S GG++A
Sbjct: 288 ICCCLPCIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSSGDDNGSSTSEGGVVA 347
Query: 186 AGTD 197
AGTD
Sbjct: 348 AGTD 351