BLASTX nr result

ID: Zingiber24_contig00040388 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040388
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK18571.1| TCP family transcription factor [Cyclamen persicum]    59   9e-07
gb|ESW05157.1| hypothetical protein PHAVU_011G156900g [Phaseolus...    58   1e-06
ref|NP_564624.2| TEOSINTE BRANCHED 1, cycloidea and PCF transcri...    55   7e-06
ref|XP_006852505.1| hypothetical protein AMTR_s00021p00158020 [A...    55   1e-05

>dbj|BAK18571.1| TCP family transcription factor [Cyclamen persicum]
          Length = 350

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 30/42 (71%), Positives = 30/42 (71%)
 Frame = +1

Query: 190 PRLPQTPSRYGSREKGAAVGEIVEVHGGHIVRSTGRKDRHSK 315
           P     PSR G R    A GEIVEVHGGHIVRSTGRKDRHSK
Sbjct: 7   PHRQPAPSRLGMRAPAGA-GEIVEVHGGHIVRSTGRKDRHSK 47


>gb|ESW05157.1| hypothetical protein PHAVU_011G156900g [Phaseolus vulgaris]
          Length = 381

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/55 (61%), Positives = 36/55 (65%)
 Frame = +1

Query: 151 VGYGQLSFLRHQPPRLPQTPSRYGSREKGAAVGEIVEVHGGHIVRSTGRKDRHSK 315
           +G  Q   L HQ      TPSR  S  +G  VGEIVEV GGHIVRSTGRKDRHSK
Sbjct: 1   MGESQNHLLLHQTA----TPSR--STMRGGGVGEIVEVQGGHIVRSTGRKDRHSK 49


>ref|NP_564624.2| TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 3
           [Arabidopsis thaliana]
           gi|75192198|sp|Q9MAH8.1|TCP3_ARATH RecName:
           Full=Transcription factor TCP3
           gi|7769872|gb|AAF69550.1|AC008007_25 F12M16.13
           [Arabidopsis thaliana] gi|20466424|gb|AAM20529.1|
           putative flower development protein cycloidea
           [Arabidopsis thaliana] gi|23198116|gb|AAN15585.1|
           putative flower development protein cycloidea
           [Arabidopsis thaliana] gi|332194788|gb|AEE32909.1|
           TEOSINTE BRANCHED 1, cycloidea and PCF transcription
           factor 3 [Arabidopsis thaliana]
          Length = 391

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/48 (58%), Positives = 30/48 (62%)
 Frame = +1

Query: 172 FLRHQPPRLPQTPSRYGSREKGAAVGEIVEVHGGHIVRSTGRKDRHSK 315
           FL    P L +      + E G   GEIVEV GGHIVRSTGRKDRHSK
Sbjct: 8   FLDSPSPPLLEMRHHQSATENGGGCGEIVEVQGGHIVRSTGRKDRHSK 55


>ref|XP_006852505.1| hypothetical protein AMTR_s00021p00158020 [Amborella trichopoda]
           gi|548856116|gb|ERN13972.1| hypothetical protein
           AMTR_s00021p00158020 [Amborella trichopoda]
          Length = 375

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/32 (81%), Positives = 26/32 (81%)
 Frame = +1

Query: 220 GSREKGAAVGEIVEVHGGHIVRSTGRKDRHSK 315
           G R  G  VGEIVEV GGHIVRSTGRKDRHSK
Sbjct: 2   GERRGGNTVGEIVEVEGGHIVRSTGRKDRHSK 33


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