BLASTX nr result
ID: Zingiber24_contig00040324
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00040324 (309 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_008854584.1| RNA polymerase beta' subunit [Curcuma roscoe... 182 4e-44 ref|YP_007475694.1| RNA polymerase beta' subunit [Zingiber spect... 182 4e-44 gb|AHA12745.1| RNA polymerase beta' subunit [Canna indica] 180 2e-43 ref|YP_008854501.1| RNA polymerase beta' subunit [Ravenala madag... 180 2e-43 ref|YP_008854415.1| RNA polymerase beta' subunit [Musa textilis]... 180 2e-43 emb|CCW72365.1| rpoC2 (chloroplast) [Musa acuminata subsp. malac... 180 2e-43 ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia coll... 180 2e-43 gb|ABU85465.1| RNA polymerase beta subunit [Musa acuminata] 180 2e-43 gb|AEZ49496.1| RNA polymerase beta'' subunit, partial [Sparganiu... 179 3e-43 gb|AEZ49494.1| RNA polymerase beta'' subunit, partial [Puya laxa] 179 3e-43 gb|AEZ49492.1| RNA polymerase beta'' subunit, partial [Pitcairni... 179 3e-43 gb|AEZ49488.1| RNA polymerase beta'' subunit, partial [Navia sax... 179 3e-43 gb|AEZ49472.1| RNA polymerase beta'' subunit, partial [Brocchini... 179 3e-43 gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii] 179 4e-43 gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimi... 179 4e-43 gb|AEZ49489.1| RNA polymerase beta'' subunit, partial [Neoasteli... 178 8e-43 ref|YP_008081876.1| DNA-directed RNA polymerase beta'' chain (ch... 177 1e-42 ref|YP_008081798.1| DNA-directed RNA polymerase beta'' chain (ch... 177 1e-42 gb|AGK25551.1| DNA-directed RNA polymerase beta'' chain (chlorop... 177 1e-42 ref|YP_008081564.1| DNA-directed RNA polymerase beta'' chain (ch... 177 1e-42 >ref|YP_008854584.1| RNA polymerase beta' subunit [Curcuma roscoeana] gi|557637491|gb|AHA13086.1| RNA polymerase beta' subunit [Curcuma roscoeana] Length = 1375 Score = 182 bits (462), Expect = 4e-44 Identities = 89/102 (87%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AEYVR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEYVR 352 >ref|YP_007475694.1| RNA polymerase beta' subunit [Zingiber spectabile] gi|449326174|gb|AGE92759.1| RNA polymerase beta' subunit [Zingiber spectabile] Length = 1380 Score = 182 bits (462), Expect = 4e-44 Identities = 89/102 (87%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AEYVR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEYVR 352 >gb|AHA12745.1| RNA polymerase beta' subunit [Canna indica] Length = 1371 Score = 180 bits (456), Expect = 2e-43 Identities = 87/102 (85%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRCLATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCLATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 352 >ref|YP_008854501.1| RNA polymerase beta' subunit [Ravenala madagascariensis] gi|557636989|gb|AHA12590.1| RNA polymerase beta' subunit [Ravenala madagascariensis] Length = 1372 Score = 180 bits (456), Expect = 2e-43 Identities = 87/102 (85%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRCLATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCLATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 352 >ref|YP_008854415.1| RNA polymerase beta' subunit [Musa textilis] gi|557636902|gb|AHA12504.1| RNA polymerase beta' subunit [Musa textilis] Length = 1364 Score = 180 bits (456), Expect = 2e-43 Identities = 87/102 (85%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRCLATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCLATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 352 >emb|CCW72365.1| rpoC2 (chloroplast) [Musa acuminata subsp. malaccensis] Length = 1364 Score = 180 bits (456), Expect = 2e-43 Identities = 87/102 (85%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRCLATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCLATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 352 >ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia collinsiana] gi|449326088|gb|AGE92674.1| RNA polymerase beta' subunit [Heliconia collinsiana] Length = 1384 Score = 180 bits (456), Expect = 2e-43 Identities = 87/102 (85%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRCLATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCLATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 352 >gb|ABU85465.1| RNA polymerase beta subunit [Musa acuminata] Length = 1359 Score = 180 bits (456), Expect = 2e-43 Identities = 87/102 (85%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRCLATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCLATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 352 >gb|AEZ49496.1| RNA polymerase beta'' subunit, partial [Sparganium eurycarpum] Length = 1387 Score = 179 bits (454), Expect = 3e-43 Identities = 86/102 (84%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRC+ATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 255 DIYIGLRCIATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 314 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 315 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 356 >gb|AEZ49494.1| RNA polymerase beta'' subunit, partial [Puya laxa] Length = 1385 Score = 179 bits (454), Expect = 3e-43 Identities = 86/102 (84%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRC+ATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCIATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 352 >gb|AEZ49492.1| RNA polymerase beta'' subunit, partial [Pitcairnia feliciana] Length = 1389 Score = 179 bits (454), Expect = 3e-43 Identities = 86/102 (84%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRC+ATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 255 DIYIGLRCIATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 314 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 315 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 356 >gb|AEZ49488.1| RNA polymerase beta'' subunit, partial [Navia saxicola] Length = 1387 Score = 179 bits (454), Expect = 3e-43 Identities = 86/102 (84%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRC+ATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 255 DIYIGLRCIATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 314 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 315 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 356 >gb|AEZ49472.1| RNA polymerase beta'' subunit, partial [Brocchinia micrantha] Length = 1388 Score = 179 bits (454), Expect = 3e-43 Identities = 86/102 (84%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRC+ATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 255 DIYIGLRCIATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 314 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 315 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 356 >gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii] Length = 1386 Score = 179 bits (453), Expect = 4e-43 Identities = 86/102 (84%), Positives = 89/102 (87%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIG+RC+ATRNQDIGIGL NRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL Sbjct: 255 DIYIGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 314 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 315 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 356 >gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimia altissima] Length = 1386 Score = 179 bits (453), Expect = 4e-43 Identities = 86/102 (84%), Positives = 89/102 (87%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIG+RC+ATRNQDIGIGL NRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL Sbjct: 255 DIYIGIRCIATRNQDIGIGLANRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 314 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 315 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 356 >gb|AEZ49489.1| RNA polymerase beta'' subunit, partial [Neoastelia spectabilis] Length = 1385 Score = 178 bits (451), Expect = 8e-43 Identities = 85/102 (83%), Positives = 90/102 (88%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIY+GLRC+ATRNQDIGIGL+NRFITFRAQPIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 255 DIYMGLRCIATRNQDIGIGLVNRFITFRAQPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 314 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AE+VR Sbjct: 315 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVR 356 >ref|YP_008081876.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium mannii] gi|482662563|gb|AGK25785.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium mannii] Length = 1378 Score = 177 bits (450), Expect = 1e-42 Identities = 85/102 (83%), Positives = 89/102 (87%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRC+ATRN+DIGIGL+NRFITFRA PIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCIATRNKDIGIGLVNRFITFRAHPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AEYVR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEYVR 352 >ref|YP_008081798.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium tracyanum] gi|482662405|gb|AGK25629.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium tracyanum] Length = 1378 Score = 177 bits (450), Expect = 1e-42 Identities = 85/102 (83%), Positives = 89/102 (87%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRC+ATRN+DIGIGL+NRFITFRA PIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCIATRNKDIGIGLVNRFITFRAHPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AEYVR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEYVR 352 >gb|AGK25551.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium mannii] Length = 1378 Score = 177 bits (450), Expect = 1e-42 Identities = 85/102 (83%), Positives = 89/102 (87%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRC+ATRN+DIGIGL+NRFITFRA PIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCIATRNKDIGIGLVNRFITFRAHPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AEYVR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEYVR 352 >ref|YP_008081564.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium aloifolium] gi|482662010|gb|AGK25239.1| DNA-directed RNA polymerase beta'' chain (chloroplast) [Cymbidium aloifolium] Length = 1378 Score = 177 bits (450), Expect = 1e-42 Identities = 85/102 (83%), Positives = 89/102 (87%) Frame = +3 Query: 3 DIYIGLRCLATRNQDIGIGLINRFITFRAQPIYIRTPFTCRNTSWICQLCYGRSPTHGDL 182 DIYIGLRC+ATRN+DIGIGL+NRFITFRA PIYIRTPFTCR+TSWICQLCYGRSPTHGDL Sbjct: 251 DIYIGLRCIATRNKDIGIGLVNRFITFRAHPIYIRTPFTCRSTSWICQLCYGRSPTHGDL 310 Query: 183 VELGEAVGIIAGQSIGEPGTQLTLRXXXXXXXXXXXXAEYVR 308 VELGEAVGIIAGQSIGEPGTQLTLR AEYVR Sbjct: 311 VELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEYVR 352