BLASTX nr result

ID: Zingiber24_contig00040315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040315
         (207 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006364651.1| PREDICTED: uncharacterized protein LOC102591...    57   2e-06
gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]     56   6e-06

>ref|XP_006364651.1| PREDICTED: uncharacterized protein LOC102591431 [Solanum tuberosum]
          Length = 958

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/65 (44%), Positives = 41/65 (63%)
 Frame = -3

Query: 196 YFMTRMQVNRDRAEEKWEGLFCPRIRKLIEKNLTKTGDCIPIKADNFHYQVSCYDGSKYS 17
           Y M+R+Q NRD+  +  + + CP+I   +EKN  K  +CI IK+D FHYQ+       +S
Sbjct: 637 YMMSRLQKNRDKMMKYCQRI-CPKIMLKLEKNKAKAVECIAIKSDQFHYQIEDIYLRLFS 695

Query: 16  VDLKE 2
           VDLKE
Sbjct: 696 VDLKE 700


>gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]
          Length = 558

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/65 (44%), Positives = 37/65 (56%)
 Frame = -3

Query: 196 YFMTRMQVNRDRAEEKWEGLFCPRIRKLIEKNLTKTGDCIPIKADNFHYQVSCYDGSKYS 17
           Y M R+Q NRD+       + CPRI   +EKN  K  +CI IK+D FHYQ+       +S
Sbjct: 276 YMMLRLQKNRDKMINH-SHIICPRILLKLEKNKDKVAECIAIKSDAFHYQIKDIHLGLFS 334

Query: 16  VDLKE 2
           VDL E
Sbjct: 335 VDLME 339


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