BLASTX nr result
ID: Zingiber24_contig00040246
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00040246
(355 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006650883.1| PREDICTED: pentatricopeptide repeat-containi... 125 8e-27
ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japo... 124 2e-26
gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indi... 124 2e-26
gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sat... 124 2e-26
ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group] g... 124 2e-26
dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare] 118 9e-25
dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare] 118 9e-25
ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containi... 113 2e-23
gb|AFW67003.1| putative pentatricopeptide repeat family protein ... 112 4e-23
ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [S... 110 2e-22
ref|XP_004961923.1| PREDICTED: pentatricopeptide repeat-containi... 102 4e-20
ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [S... 102 4e-20
gb|EMT16538.1| hypothetical protein F775_08209 [Aegilops tauschii] 101 9e-20
ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 100 2e-19
ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
gb|EMJ08364.1| hypothetical protein PRUPE_ppa023637mg [Prunus pe... 100 3e-19
ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
gb|EXB38470.1| hypothetical protein L484_022371 [Morus notabilis] 99 8e-19
>ref|XP_006650883.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Oryza brachyantha]
Length = 709
Score = 125 bits (313), Expect = 8e-27
Identities = 57/112 (50%), Positives = 83/112 (74%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNL++GKLAA K+ EL+ DSASYVL+S++HA+HGEW+DA VR +M+E ++K+AG SW
Sbjct: 594 RNLDMGKLAADKLMELSGTDSASYVLMSSIHAMHGEWEDAGKVRRRMDETGVKKDAGCSW 653
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCETNIGVNEFEI 337
I+I NEVHSF +RD SHP+S +IYQ L E+ +++ + E + F++
Sbjct: 654 IEIKNEVHSFAARDMSHPDSASIYQMLGELVSVMLMQNSAHENFDELESFDV 705
>ref|XP_004981076.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X2 [Setaria italica]
Length = 681
Score = 124 bits (312), Expect = 1e-26
Identities = 55/95 (57%), Positives = 78/95 (82%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNL++GKLAA K+ EL+ DSASYVL+SN++A+HGEW DA VR +M+E ++KEAG SW
Sbjct: 578 RNLDMGKLAADKLMELSERDSASYVLMSNIYAMHGEWQDAGRVRRRMDEVGVKKEAGESW 637
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
I++ NEVH+FV+RD SHP+S +IYQ L E+ ++++
Sbjct: 638 IEVKNEVHTFVARDTSHPDSASIYQMLAELVDVMQ 672
>ref|XP_004981075.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like isoform X1 [Setaria italica]
Length = 683
Score = 124 bits (312), Expect = 1e-26
Identities = 55/95 (57%), Positives = 78/95 (82%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNL++GKLAA K+ EL+ DSASYVL+SN++A+HGEW DA VR +M+E ++KEAG SW
Sbjct: 578 RNLDMGKLAADKLMELSERDSASYVLMSNIYAMHGEWQDAGRVRRRMDEVGVKKEAGESW 637
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
I++ NEVH+FV+RD SHP+S +IYQ L E+ ++++
Sbjct: 638 IEVKNEVHTFVARDTSHPDSASIYQMLAELVDVMQ 672
>gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 124 bits (310), Expect = 2e-26
Identities = 55/95 (57%), Positives = 78/95 (82%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNL++GKLAA ++ EL+ DSASYVL+SN++A+HGEW+DA+ VR +M+E ++K+AG SW
Sbjct: 595 RNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSW 654
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
I+INNEVH+F SRD SHP S +IYQ L E+ +++
Sbjct: 655 IEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQ 689
>gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 124 bits (310), Expect = 2e-26
Identities = 55/95 (57%), Positives = 78/95 (82%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNL++GKLAA ++ EL+ DSASYVL+SN++A+HGEW+DA+ VR +M+E ++K+AG SW
Sbjct: 549 RNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSW 608
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
I+INNEVH+F SRD SHP S +IYQ L E+ +++
Sbjct: 609 IEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQ 643
>gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 124 bits (310), Expect = 2e-26
Identities = 55/95 (57%), Positives = 78/95 (82%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNL++GKLAA ++ EL+ DSASYVL+SN++A+HGEW+DA+ VR +M+E ++K+AG SW
Sbjct: 522 RNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSW 581
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
I+INNEVH+F SRD SHP S +IYQ L E+ +++
Sbjct: 582 IEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQ 616
>ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide
repeat domain contianing protein [Oryza sativa Japonica
Group] gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza
sativa Japonica Group] gi|215686748|dbj|BAG89598.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 124 bits (310), Expect = 2e-26
Identities = 55/95 (57%), Positives = 78/95 (82%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNL++GKLAA ++ EL+ DSASYVL+SN++A+HGEW+DA+ VR +M+E ++K+AG SW
Sbjct: 595 RNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGEWEDARKVRRRMDETGVKKDAGCSW 654
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
I+INNEVH+F SRD SHP S +IYQ L E+ +++
Sbjct: 655 IEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQ 689
>dbj|BAJ88475.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 118 bits (295), Expect = 9e-25
Identities = 52/94 (55%), Positives = 76/94 (80%)
Frame = +2
Query: 5 NLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWI 184
NLE G+LAA K+ EL+ DSASYVL+S +HA+HGEW DA +VR +M+E ++KEAGRSW+
Sbjct: 581 NLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWV 640
Query: 185 QINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
++ NEVH+FV++D SHP+S +IY+ L E+ + ++
Sbjct: 641 EVRNEVHTFVAQDVSHPDSPSIYRMLWELSDAMR 674
>dbj|BAJ89568.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 691
Score = 118 bits (295), Expect = 9e-25
Identities = 52/94 (55%), Positives = 76/94 (80%)
Frame = +2
Query: 5 NLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSWI 184
NLE G+LAA K+ EL+ DSASYVL+S +HA+HGEW DA +VR +M+E ++KEAGRSW+
Sbjct: 581 NLETGRLAAEKLVELSDQDSASYVLMSGIHAMHGEWRDADMVRRRMDEAGVRKEAGRSWV 640
Query: 185 QINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
++ NEVH+FV++D SHP+S +IY+ L E+ + ++
Sbjct: 641 EVRNEVHTFVAQDVSHPDSPSIYRMLWELSDAMR 674
>ref|XP_003559158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Brachypodium distachyon]
Length = 695
Score = 113 bits (283), Expect = 2e-23
Identities = 54/105 (51%), Positives = 78/105 (74%), Gaps = 4/105 (3%)
Frame = +2
Query: 5 NLELGKLAAAKVFELTS----LDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAG 172
NLE G+LAA ++ EL+ DSASYVL+S +HA+ GEW DA VR +M+E ++KEAG
Sbjct: 580 NLETGELAAERLMELSEGGEDRDSASYVLMSGIHAMRGEWRDAYRVRRRMDEAGVRKEAG 639
Query: 173 RSWIQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCE 307
SW++++NEVH+FV+RD+SHP+S +IYQ L E+F+ ++ C E
Sbjct: 640 CSWVEVHNEVHTFVARDKSHPDSASIYQILWELFDAMQDTACDAE 684
>gb|AFW67003.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 719
Score = 112 bits (281), Expect = 4e-23
Identities = 52/95 (54%), Positives = 76/95 (80%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNL++GKLAA K+ EL+ DSASYVL+SNL+A+H EW DA+ VR +M+E ++K+AG SW
Sbjct: 615 RNLDIGKLAADKLMELSERDSASYVLMSNLYAMHEEWRDAERVRRRMDEIGVKKDAGWSW 674
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
I++ NEV++FV+ D SHP+S +IYQ L E+ +++
Sbjct: 675 IEVKNEVNTFVAGDMSHPDSTSIYQMLAELLVVMQ 709
>ref|XP_002466113.1| hypothetical protein SORBIDRAFT_01g001570 [Sorghum bicolor]
gi|241919967|gb|EER93111.1| hypothetical protein
SORBIDRAFT_01g001570 [Sorghum bicolor]
Length = 693
Score = 110 bits (275), Expect = 2e-22
Identities = 50/95 (52%), Positives = 74/95 (77%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
+NL++GKLA K+ EL+ DSASYVL+SNL+A+H EW DA+ VR +M+E ++K+AG SW
Sbjct: 589 KNLDIGKLATDKLMELSERDSASYVLMSNLYAMHEEWQDAERVRRRMDEIGVKKDAGWSW 648
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIK 286
I++ NEV +FV+RD SH +S +IYQ L E+ +++
Sbjct: 649 IEVKNEVSTFVARDTSHSDSASIYQMLAELVVVMQ 683
>ref|XP_004961923.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
[Setaria italica]
Length = 872
Score = 102 bits (255), Expect = 4e-20
Identities = 51/109 (46%), Positives = 75/109 (68%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
+N+ELGKLAA K+ L LDSA+YVLLSN+++ G+W + VR M+ ++KEAG SW
Sbjct: 683 KNVELGKLAAEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTRKVKKEAGCSW 742
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCETNIGVNE 328
IQI N+VHSF++ D+SHP S IY +L+ + +K E +T+ ++E
Sbjct: 743 IQIKNKVHSFIASDKSHPLSEQIYAKLKAMTARLKKEGYCPDTSFVLHE 791
>ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
gi|241946470|gb|EES19615.1| hypothetical protein
SORBIDRAFT_09g021880 [Sorghum bicolor]
Length = 878
Score = 102 bits (255), Expect = 4e-20
Identities = 50/109 (45%), Positives = 73/109 (66%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
+N+ELGKLAA K+ L DSA+YVLLSN+++ G+W + VR M+ ++KEAG SW
Sbjct: 689 KNVELGKLAAEKLLSLEPFDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVKKEAGCSW 748
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCETNIGVNE 328
IQI N+VHSF++ D+SHP S IY +L + +K E +T+ ++E
Sbjct: 749 IQIKNKVHSFIASDKSHPLSEQIYAKLRAMTTKLKQEGYCPDTSFALHE 797
>gb|EMT16538.1| hypothetical protein F775_08209 [Aegilops tauschii]
Length = 773
Score = 101 bits (252), Expect = 9e-20
Identities = 51/111 (45%), Positives = 74/111 (66%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
+N+ELGKLAA K+ L LDSA+YVLLSN++A G+W + VR M+ ++KEAG SW
Sbjct: 500 KNVELGKLAAEKLLSLEPLDSATYVLLSNIYASAGKWKERDEVRKLMDSKKVKKEAGSSW 559
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCETNIGVNEFE 334
IQI N+VHSF++ D+SH S IY +L+ + +K E T+ +++ E
Sbjct: 560 IQIKNKVHSFIASDKSHRLSDQIYTKLKAMTARLKQEGYCPNTSFVLHDME 610
>ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 100 bits (249), Expect = 2e-19
Identities = 51/111 (45%), Positives = 71/111 (63%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNLELGKLAA K+ L D+ YVLLSN+HA+ G W++ VR M+E ++KEAG SW
Sbjct: 689 RNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSW 748
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCETNIGVNEFE 334
I+I N + SF++ D SHP S +Y +LEE+ +K +TN ++ E
Sbjct: 749 IEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVE 799
>ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
[Cucumis sativus]
Length = 878
Score = 100 bits (249), Expect = 2e-19
Identities = 51/111 (45%), Positives = 71/111 (63%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RNLELGKLAA K+ L D+ YVLLSN+HA+ G W++ VR M+E ++KEAG SW
Sbjct: 689 RNLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSW 748
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCETNIGVNEFE 334
I+I N + SF++ D SHP S +Y +LEE+ +K +TN ++ E
Sbjct: 749 IEIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVE 799
>gb|EMJ08364.1| hypothetical protein PRUPE_ppa023637mg [Prunus persica]
Length = 731
Score = 100 bits (248), Expect = 3e-19
Identities = 49/111 (44%), Positives = 73/111 (65%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
RN+ELGKLAA K+ L DSA+YVLLSN++A G W + VR M+E +++K+ G SW
Sbjct: 542 RNIELGKLAAEKLIALQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDERNVKKQPGYSW 601
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCETNIGVNEFE 334
I++ N+ +SF++ D SHP S IY +LEE+ N + +TN +++ E
Sbjct: 602 IEVKNKTYSFLAGDLSHPMSDLIYSKLEELNNRLSDMGYQPDTNYVLHDVE 652
>ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
[Brachypodium distachyon]
Length = 874
Score = 99.0 bits (245), Expect = 6e-19
Identities = 50/109 (45%), Positives = 73/109 (66%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
+N+ELGKLAA K+ L DSA+YVLLSN++A G W + VR M+ ++KEAG SW
Sbjct: 685 KNVELGKLAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSW 744
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCETNIGVNE 328
IQI N+VHSF++ D+SHP S IY +L+ + +K E T++ +++
Sbjct: 745 IQIKNKVHSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHD 793
>gb|EXB38470.1| hypothetical protein L484_022371 [Morus notabilis]
Length = 858
Score = 98.6 bits (244), Expect = 8e-19
Identities = 49/111 (44%), Positives = 72/111 (64%)
Frame = +2
Query: 2 RNLELGKLAAAKVFELTSLDSASYVLLSNLHALHGEWDDAKIVRNKMEENDIQKEAGRSW 181
R+LELGK AA K+ L DSA+YVLLSN++A G W + VR M+E ++KEAG SW
Sbjct: 669 RDLELGKFAAEKLISLQPEDSAAYVLLSNIYAATGNWQERNTVRKLMDERKVKKEAGYSW 728
Query: 182 IQINNEVHSFVSRDESHPESGTIYQRLEEIFNIIKSEKCLCETNIGVNEFE 334
I++ ++ HSF++ D SHP + IY +LEE+ +K +TN +++ E
Sbjct: 729 IEVKHKTHSFLAGDLSHPMAENIYSKLEELRIRLKDMGYQPDTNYVLHDVE 779