BLASTX nr result

ID: Zingiber24_contig00040196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040196
         (290 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHI87860.1| MYB5, partial [Dendrobium officinale]                   56   4e-06

>gb|AHI87860.1| MYB5, partial [Dendrobium officinale]
          Length = 185

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 5/85 (5%)
 Frame = -3

Query: 288 DEAARSLRGPKAKTNF---GFSAAEQRVGPGLGQVRRGFAPPAI--GPDLVLRPAWETEA 124
           DEAAR+LRGPKAKTNF      ++E    P +    +   PPA   G DLV+        
Sbjct: 82  DEAARNLRGPKAKTNFTDGDVPSSESSSPPAIWTAAQW--PPAFPDGRDLVI-----VAP 134

Query: 123 PRGPEFSGYRFEEVKMVVRGVQERR 49
             G EFSGYRF+ V+M+VR  QE++
Sbjct: 135 TAGSEFSGYRFDAVEMMVRTEQEKK 159


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