BLASTX nr result

ID: Zingiber24_contig00040137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040137
         (287 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001144766.1| uncharacterized protein LOC100277825 [Zea ma...    61   1e-07
ref|XP_004952550.1| PREDICTED: MAP7 domain-containing protein 1-...    56   6e-06

>ref|NP_001144766.1| uncharacterized protein LOC100277825 [Zea mays]
           gi|195646712|gb|ACG42824.1| hypothetical protein [Zea
           mays]
          Length = 169

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
 Frame = +3

Query: 36  RELQLLVQSSTSLPS----EAPKSMAGCDPTAHPLPDLNLSMSVGTPWPSAKE------- 182
           +ELQLL+  +T+  +     AP+  A   P+ HP  DL+LS+S+G P P A E       
Sbjct: 8   KELQLLLLPTTTPLNAAFLHAPRPAAASSPSDHPQLDLSLSISIGPPTPHAAEQAGRGRT 67

Query: 183 ----ETDSYARKLQVLRQHTAEQIRLAAVEQAYIERTRE 287
               E    A  +Q L+Q  AEQ R+A+ E+AY ER +E
Sbjct: 68  ATAAEQSKRAADVQALKQQAAEQARMASAERAYAERVKE 106


>ref|XP_004952550.1| PREDICTED: MAP7 domain-containing protein 1-like [Setaria italica]
          Length = 177

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 17/111 (15%)
 Frame = +3

Query: 6   FLVSMEKNR-PRELQLLVQSSTS---LPSEAPKSMAGCDPTAHPLPDLNLSMSVGTPWPS 173
           F  +ME +R  RELQLL+  +T+       AP+  A    + HP  DL+LS+S+G P P+
Sbjct: 6   FSAAMEPHRGERELQLLLLPTTTPLDAAFHAPRPPA--TTSDHPQLDLSLSISIGPPPPA 63

Query: 174 AK-------------EETDSYARKLQVLRQHTAEQIRLAAVEQAYIERTRE 287
            +             +++   A  +Q L++HTAEQ R+A+ E+AY ER  E
Sbjct: 64  PQPSPPPAPPPAASADQSKKAAADVQALKRHTAEQARMASAERAYAERVME 114


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