BLASTX nr result
ID: Zingiber24_contig00040102
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00040102
(694 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006848621.1| hypothetical protein AMTR_s00171p00033150 [A... 115 2e-23
ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containin... 107 3e-21
emb|CBI35338.3| unnamed protein product [Vitis vinifera] 107 3e-21
ref|XP_004489185.1| PREDICTED: katanin p80 WD40 repeat-containin... 104 2e-20
ref|XP_004297695.1| PREDICTED: katanin p80 WD40 repeat-containin... 102 9e-20
gb|EMJ23140.1| hypothetical protein PRUPE_ppa001553mg [Prunus pe... 101 2e-19
ref|XP_003525689.2| PREDICTED: katanin p80 WD40 repeat-containin... 101 3e-19
ref|XP_006603797.1| PREDICTED: katanin p80 WD40 repeat-containin... 100 7e-19
gb|ESW22857.1| hypothetical protein PHAVU_004G000600g [Phaseolus... 99 1e-18
ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus commu... 99 2e-18
ref|XP_004489186.1| PREDICTED: katanin p80 WD40 repeat-containin... 98 2e-18
ref|XP_006468674.1| PREDICTED: katanin p80 WD40 repeat-containin... 98 3e-18
ref|XP_006468672.1| PREDICTED: katanin p80 WD40 repeat-containin... 98 3e-18
gb|EOX98980.1| Transducin/WD40 repeat-like superfamily protein [... 98 3e-18
ref|XP_002316424.2| hypothetical protein POPTR_0010s26190g [Popu... 97 4e-18
ref|XP_002311885.1| hypothetical protein POPTR_0008s00290g [Popu... 97 4e-18
ref|XP_006448506.1| hypothetical protein CICLE_v10014294mg [Citr... 97 5e-18
gb|EMT21321.1| hypothetical protein F775_02319 [Aegilops tauschii] 96 8e-18
tpg|DAA35346.1| TPA: hypothetical protein ZEAMMB73_159052 [Zea m... 96 1e-17
ref|XP_006653028.1| PREDICTED: katanin p80 WD40 repeat-containin... 96 1e-17
>ref|XP_006848621.1| hypothetical protein AMTR_s00171p00033150 [Amborella trichopoda]
gi|548851972|gb|ERN10202.1| hypothetical protein
AMTR_s00171p00033150 [Amborella trichopoda]
Length = 800
Score = 115 bits (287), Expect = 2e-23
Identities = 59/87 (67%), Positives = 67/87 (77%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
SKMDRH VR+FGPVIHST+SA SVGVDLQAEQRLERCNLC +ELEKVKH
Sbjct: 714 SKMDRHIGISLEALLKLVRVFGPVIHSTLSASSSVGVDLQAEQRLERCNLCFIELEKVKH 773
Query: 512 SISSPMRRGGSIAKNARELNLALQGVL 432
+I S ++GGS+AK A+ELNL LQ VL
Sbjct: 774 AIPSLAKKGGSVAKFAQELNLTLQDVL 800
>ref|XP_002268907.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Vitis vinifera]
Length = 800
Score = 107 bits (268), Expect = 3e-21
Identities = 56/87 (64%), Positives = 65/87 (74%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S+MDRH VRIFG VIHST+SA SVGVD+QAEQRLERCNLC +ELEK+KH
Sbjct: 714 SEMDRHLGISLEMLLKLVRIFGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKH 773
Query: 512 SISSPMRRGGSIAKNARELNLALQGVL 432
+ + RRGGS+AK A+ELNLAL VL
Sbjct: 774 CLPALTRRGGSVAKLAQELNLALLEVL 800
>emb|CBI35338.3| unnamed protein product [Vitis vinifera]
Length = 989
Score = 107 bits (268), Expect = 3e-21
Identities = 56/87 (64%), Positives = 65/87 (74%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S+MDRH VRIFG VIHST+SA SVGVD+QAEQRLERCNLC +ELEK+KH
Sbjct: 903 SEMDRHLGISLEMLLKLVRIFGSVIHSTLSASSSVGVDIQAEQRLERCNLCFIELEKIKH 962
Query: 512 SISSPMRRGGSIAKNARELNLALQGVL 432
+ + RRGGS+AK A+ELNLAL VL
Sbjct: 963 CLPALTRRGGSVAKLAQELNLALLEVL 989
>ref|XP_004489185.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
isoform X1 [Cicer arietinum]
Length = 747
Score = 104 bits (260), Expect = 2e-20
Identities = 57/86 (66%), Positives = 63/86 (73%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S+ DRH VRIFG VI+ST+SA PSVGVD++AE RLERCNLC VELEKVK
Sbjct: 661 SETDRHLSISVEMLLNLVRIFGSVIYSTLSAKPSVGVDIEAENRLERCNLCFVELEKVKR 720
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ S MRRGGSIAK A ELNLALQ V
Sbjct: 721 FLPSLMRRGGSIAKFAHELNLALQDV 746
>ref|XP_004297695.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Fragaria vesca subsp. vesca]
Length = 795
Score = 102 bits (255), Expect = 9e-20
Identities = 55/86 (63%), Positives = 64/86 (74%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S MDRH VRIFG VI+ST+SA SVGVD++AEQRLERCNLC +ELEKVK
Sbjct: 709 SNMDRHLGISLEMLLKLVRIFGSVIYSTLSASSSVGVDIEAEQRLERCNLCFMELEKVKG 768
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ + RRGGSIAK+A+ELNLALQ V
Sbjct: 769 CLPALTRRGGSIAKSAQELNLALQEV 794
>gb|EMJ23140.1| hypothetical protein PRUPE_ppa001553mg [Prunus persica]
Length = 803
Score = 101 bits (252), Expect = 2e-19
Identities = 54/86 (62%), Positives = 64/86 (74%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S MDRH VR+FG VI+ST+SA SVGVD++AEQRLERCN C +ELEKVK
Sbjct: 717 SNMDRHLGISLEMLLKLVRVFGSVIYSTLSASSSVGVDIEAEQRLERCNNCFMELEKVKT 776
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+S+ RRGGSIAK+A+ELNLALQ V
Sbjct: 777 CLSALTRRGGSIAKSAQELNLALQEV 802
>ref|XP_003525689.2| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Glycine max]
Length = 759
Score = 101 bits (251), Expect = 3e-19
Identities = 55/87 (63%), Positives = 63/87 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S+M+RH VRIFG VI+STVSA VGVD++AE RLERCNLC ELEKVK
Sbjct: 673 SEMERHLGISLEMLLKLVRIFGSVIYSTVSATQPVGVDIEAENRLERCNLCFTELEKVKR 732
Query: 512 SISSPMRRGGSIAKNARELNLALQGVL 432
+ S RRGGSIAK+A+ELNLALQ VL
Sbjct: 733 FLPSLSRRGGSIAKSAQELNLALQDVL 759
>ref|XP_006603797.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Glycine max]
Length = 759
Score = 99.8 bits (247), Expect = 7e-19
Identities = 54/86 (62%), Positives = 62/86 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S+M+RH VRIFG VI+STVSA VGVD++AE RLERCNLC ELEKVK
Sbjct: 673 SEMERHLGISLEMLLKLVRIFGSVIYSTVSATQPVGVDIEAENRLERCNLCFTELEKVKR 732
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ S RRGGSIAK+A+ELNLALQ V
Sbjct: 733 FLPSLSRRGGSIAKSAQELNLALQDV 758
>gb|ESW22857.1| hypothetical protein PHAVU_004G000600g [Phaseolus vulgaris]
gi|561024173|gb|ESW22858.1| hypothetical protein
PHAVU_004G000600g [Phaseolus vulgaris]
Length = 759
Score = 99.0 bits (245), Expect = 1e-18
Identities = 54/86 (62%), Positives = 62/86 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S+M+RH VRIFG VI+STVSA VGVD++AE+RLERCNLC ELEKVK
Sbjct: 673 SEMERHQGISLEMLLKLVRIFGSVIYSTVSAPQPVGVDIEAEKRLERCNLCFPELEKVKR 732
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ S RRGGSIAK+A ELNLALQ V
Sbjct: 733 FLPSLSRRGGSIAKSAHELNLALQDV 758
>ref|XP_002513719.1| katanin P80 subunit, putative [Ricinus communis]
gi|223547170|gb|EEF48666.1| katanin P80 subunit,
putative [Ricinus communis]
Length = 803
Score = 98.6 bits (244), Expect = 2e-18
Identities = 52/84 (61%), Positives = 60/84 (71%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S MDRH VR FG +I+STVSA VGVD++AEQRLERCNLC VELEKVK
Sbjct: 717 SDMDRHLSISLDVLLKLVRTFGSMIYSTVSASTPVGVDIEAEQRLERCNLCFVELEKVKR 776
Query: 512 SISSPMRRGGSIAKNARELNLALQ 441
+ + MRRGGS+AK +ELNLALQ
Sbjct: 777 CLPTLMRRGGSVAKITQELNLALQ 800
>ref|XP_004489186.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
isoform X2 [Cicer arietinum]
Length = 746
Score = 98.2 bits (243), Expect = 2e-18
Identities = 56/86 (65%), Positives = 62/86 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S+ DRH VRIFG VI+ST+SA PSVGVD++AE RLERCNLC VELEKVK
Sbjct: 661 SETDRHLSISVEMLLNLVRIFGSVIYSTLSAKPSVGVDIEAENRLERCNLCFVELEKVKR 720
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ S M RGGSIAK A ELNLALQ V
Sbjct: 721 FLPSLM-RGGSIAKFAHELNLALQDV 745
>ref|XP_006468674.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
isoform X3 [Citrus sinensis]
Length = 811
Score = 97.8 bits (242), Expect = 3e-18
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S MDRH VR FG +I+S +SA SVGVD++AEQR+ERCN C +ELEKVK
Sbjct: 725 SDMDRHLSISLDILLKLVRTFGSMIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKC 784
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ + MRRGGS+AK+A+ELNLALQ V
Sbjct: 785 CLPTLMRRGGSVAKSAQELNLALQDV 810
>ref|XP_006468672.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
isoform X1 [Citrus sinensis]
Length = 819
Score = 97.8 bits (242), Expect = 3e-18
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S MDRH VR FG +I+S +SA SVGVD++AEQR+ERCN C +ELEKVK
Sbjct: 733 SDMDRHLSISLDILLKLVRTFGSMIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKC 792
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ + MRRGGS+AK+A+ELNLALQ V
Sbjct: 793 CLPTLMRRGGSVAKSAQELNLALQDV 818
>gb|EOX98980.1| Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Length = 1199
Score = 97.8 bits (242), Expect = 3e-18
Identities = 48/86 (55%), Positives = 62/86 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S MDRH +R+FG +I+ST+SA VGVD++AEQR ERCNLC +ELEKVK
Sbjct: 769 SDMDRHLSISLDMLLKLIRVFGSMIYSTLSASTPVGVDIEAEQRFERCNLCFIELEKVKR 828
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ + RRGGS+AK+A+ELNLA+Q V
Sbjct: 829 CLPTLTRRGGSVAKSAQELNLAIQEV 854
>ref|XP_002316424.2| hypothetical protein POPTR_0010s26190g [Populus trichocarpa]
gi|550330656|gb|EEF02595.2| hypothetical protein
POPTR_0010s26190g [Populus trichocarpa]
Length = 728
Score = 97.4 bits (241), Expect = 4e-18
Identities = 51/86 (59%), Positives = 62/86 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S MDRH VR FG +I+ST+SA SVGVD++AEQRLERCN+C VELEKVK
Sbjct: 642 SDMDRHSSISLDMLLKLVRTFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVKR 701
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ + R+GGS+AK A+ELNLALQ V
Sbjct: 702 CLLTLTRKGGSVAKYAQELNLALQEV 727
>ref|XP_002311885.1| hypothetical protein POPTR_0008s00290g [Populus trichocarpa]
gi|222851705|gb|EEE89252.1| hypothetical protein
POPTR_0008s00290g [Populus trichocarpa]
Length = 802
Score = 97.4 bits (241), Expect = 4e-18
Identities = 51/86 (59%), Positives = 62/86 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S MDRH VR+FG +I+ST+SA SVGVD++AEQRLERCN+C VELEKVK
Sbjct: 716 SDMDRHLSISLDMLLKLVRMFGSMIYSTLSASTSVGVDIEAEQRLERCNICFVELEKVKR 775
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ + R+GGS+AK A ELNLALQ V
Sbjct: 776 CLLTLTRKGGSVAKFAHELNLALQEV 801
>ref|XP_006448506.1| hypothetical protein CICLE_v10014294mg [Citrus clementina]
gi|557551117|gb|ESR61746.1| hypothetical protein
CICLE_v10014294mg [Citrus clementina]
Length = 818
Score = 97.1 bits (240), Expect = 5e-18
Identities = 50/86 (58%), Positives = 62/86 (72%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
S MDRH VR FG +I+S +SA SVGVD++AEQR+ERCN C +ELEKVK
Sbjct: 733 SDMDRHLSISLDILLKLVRTFGLMIYSAISASTSVGVDIEAEQRIERCNRCFIELEKVKC 792
Query: 512 SISSPMRRGGSIAKNARELNLALQGV 435
+ + MRRGGS+AK+A+ELNLALQ V
Sbjct: 793 CLPTLMRRGGSVAKSAQELNLALQDV 818
>gb|EMT21321.1| hypothetical protein F775_02319 [Aegilops tauschii]
Length = 1377
Score = 96.3 bits (238), Expect = 8e-18
Identities = 51/88 (57%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPS-VGVDLQAEQRLERCNLCIVELEKVK 516
SK DRH VR FGPVIHSTVS GPS VGVDL+AEQR ERCNLC +ELEKVK
Sbjct: 1289 SKTDRHVAVSLELVVKLVRTFGPVIHSTVSVGPSSVGVDLEAEQRRERCNLCFIELEKVK 1348
Query: 515 HSISSPMRRGGSIAKNARELNLALQGVL 432
+ + S MRR G+ + A+EL+L Q ++
Sbjct: 1349 NKLPSLMRRKGAASNTAQELSLVFQEIM 1376
>tpg|DAA35346.1| TPA: hypothetical protein ZEAMMB73_159052 [Zea mays]
Length = 877
Score = 95.9 bits (237), Expect = 1e-17
Identities = 48/87 (55%), Positives = 60/87 (68%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPSVGVDLQAEQRLERCNLCIVELEKVKH 513
SK+DRH VR FGP+IHSTVS+GP VGVDL+AEQR ERCNLC +ELEK K+
Sbjct: 790 SKIDRHLVVALELLVKLVRTFGPMIHSTVSSGPCVGVDLEAEQRRERCNLCFIELEKAKN 849
Query: 512 SISSPMRRGGSIAKNARELNLALQGVL 432
+ S RR G++A A+EL L Q ++
Sbjct: 850 KLPSLTRRKGAVANAAQELALVFQEIM 876
>ref|XP_006653028.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Oryza brachyantha]
Length = 937
Score = 95.5 bits (236), Expect = 1e-17
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = -3
Query: 692 SKMDRHXXXXXXXXXXXVRIFGPVIHSTVSAGPS-VGVDLQAEQRLERCNLCIVELEKVK 516
SK DRH VR FG VIHSTVSAGPS VGVDLQAEQR ERCNLC +ELEKVK
Sbjct: 850 SKTDRHLGVSLELLVKLVRTFGSVIHSTVSAGPSSVGVDLQAEQRRERCNLCFIELEKVK 909
Query: 515 HSISSPMRRGGSIAKNARELNLALQGVL 432
+ + S RR G++A A+EL+L Q ++
Sbjct: 910 NKLPSLSRRKGAVANTAQELSLVFQELM 937