BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040057
         (415 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containi...   169   4e-40
ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containi...   163   2e-38
gb|EMJ23574.1| hypothetical protein PRUPE_ppa004015mg [Prunus pe...   162   4e-38
ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago t...   161   1e-37
gb|ESW29575.1| hypothetical protein PHAVU_002G081200g [Phaseolus...   160   2e-37
gb|EOY01760.1| Pentatricopeptide repeat-containing protein [Theo...   160   2e-37
ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containi...   159   3e-37
ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containi...   156   3e-36
ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   153   2e-35
gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]     150   2e-34
ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containi...   146   2e-33
ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
gb|EXB45758.1| hypothetical protein L484_003842 [Morus notabilis]     137   2e-30
gb|EMJ14805.1| hypothetical protein PRUPE_ppa002332mg [Prunus pe...   136   3e-30
gb|ABR17838.1| unknown [Picea sitchensis]                             136   3e-30
emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]   136   3e-30
ref|NP_199192.1| pentatricopeptide repeat-containing protein [Ar...   135   4e-30
ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containi...   135   4e-30
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi...   135   4e-30
emb|CBI29077.3| unnamed protein product [Vitis vinifera]              135   4e-30

>ref|XP_002274352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 536

 Score =  169 bits (428), Expect = 4e-40
 Identities = 80/139 (57%), Positives = 109/139 (78%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+L++AKKLFD M+ +DT+CWN MI G+A++G G++AL+LF+ M K  VKPDD T+IAI 
Sbjct: 286 GSLDIAKKLFDGMSQRDTICWNAMISGMAMNGDGDNALRLFSEMEKAGVKPDDITFIAIF 345

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           TACS+S +  E ++  +SM + Y +EPKSEHY C+VD LGRAG  KEA+E+I +M    S
Sbjct: 346 TACSYSGMAHEAIRLLNSMCTVYNMEPKSEHYGCIVDLLGRAGLLKEAKELILKMPNSSS 405

Query: 358 PSDKAIAWRALLSACWNHG 414
           P+++AIAWRALLSAC +HG
Sbjct: 406 PTEQAIAWRALLSACCSHG 424


>ref|XP_003520106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Glycine max]
          Length = 518

 Score =  163 bits (413), Expect = 2e-38
 Identities = 83/140 (59%), Positives = 101/140 (72%), Gaps = 2/140 (1%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GNL LAK+LFD+M  +D VCWN MI GLA+HG G  ALK+F+ M K  +KPDD T+IA+ 
Sbjct: 286 GNLELAKRLFDSMPERDIVCWNAMISGLAMHGDGASALKMFSEMEKTGIKPDDITFIAVF 345

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRM-SGDV 354
           TACS+S +  EGLQ  D MSS Y IEPKSEHY C+VD L RAG F EA  +I R+ S   
Sbjct: 346 TACSYSGMAHEGLQLLDKMSSLYEIEPKSEHYGCLVDLLSRAGLFGEAMVMIRRITSTSW 405

Query: 355 SPSDKAIAWRALLSACWNHG 414
           + S++ +AWRA LSAC NHG
Sbjct: 406 NGSEETLAWRAFLSACCNHG 425



 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 32/138 (23%), Positives = 62/138 (44%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+++ A+  FD    KD   W  MI G   +   ++ L LF  +    V PD++ +++IL
Sbjct: 185 GDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTHVVPDESIFVSIL 244

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
           +AC+H   ++ G+     ++   +         ++D   + G  + A+ +      D  P
Sbjct: 245 SACAHLGALDIGIWIHRYLNRKTVSLSIRLSTSLLDMYAKCGNLELAKRLF-----DSMP 299

Query: 361 SDKAIAWRALLSACWNHG 414
               + W A++S    HG
Sbjct: 300 ERDIVCWNAMISGLAMHG 317


>gb|EMJ23574.1| hypothetical protein PRUPE_ppa004015mg [Prunus persica]
          Length = 535

 Score =  162 bits (410), Expect = 4e-38
 Identities = 80/139 (57%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G L+LA+ LF  M  +DTVCWN MI G+A HG GE AL+LF  M    V+PDD T+IA+ 
Sbjct: 290 GKLDLARGLFYQMPKRDTVCWNAMISGMATHGDGEGALELFREMEAAWVRPDDITFIAVF 349

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           TACS+S +  EG++ FD M   Y IEPKSEHY C+VD L RAG F+EA+EII RM     
Sbjct: 350 TACSYSGMAHEGMKVFDKMCRIYNIEPKSEHYGCIVDLLSRAGLFEEAKEIIQRMPSSSK 409

Query: 358 PSDKAIAWRALLSACWNHG 414
           PS++A+AWRA LSAC N G
Sbjct: 410 PSEEAVAWRAFLSACCNQG 428



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 31/138 (22%), Positives = 63/138 (45%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+L+ A+  FD    +D   W  MI G   +   ++ L +F  M   +++PD+A ++++L
Sbjct: 189 GDLDTARLFFDEAPVRDRGIWGAMISGYVQNNCFKEGLYMFRLMQLTEIEPDEAIFVSVL 248

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
            AC+H   ++ G+     ++   +         ++D   + G    A+ +  +M     P
Sbjct: 249 CACAHLGALDTGIWIHSYLNRLRLPLSVRLSTGLIDMYAKCGKLDLARGLFYQM-----P 303

Query: 361 SDKAIAWRALLSACWNHG 414
               + W A++S    HG
Sbjct: 304 KRDTVCWNAMISGMATHG 321


>ref|XP_003614017.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355515352|gb|AES96975.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 525

 Score =  161 bits (407), Expect = 1e-37
 Identities = 79/139 (56%), Positives = 99/139 (71%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GNL LAK+LFD+M  +D VCWN MI G+A+HG G+ ALKLF  M K  VKPDD T+IA+ 
Sbjct: 289 GNLELAKRLFDSMNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKVGVKPDDITFIAVF 348

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           TACS+S +  EGL   D M S Y I PKSEHY C+VD L RAG F+EA  +I +++   +
Sbjct: 349 TACSYSGMAYEGLMLLDKMCSVYNIVPKSEHYGCLVDLLSRAGLFEEAMVMIRKITNSWN 408

Query: 358 PSDKAIAWRALLSACWNHG 414
            S++ +AWRA LSAC NHG
Sbjct: 409 GSEETLAWRAFLSACCNHG 427



 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+++ A+  FD    KD   W  MI G   +   +++L LF  M    + PD++ +++IL
Sbjct: 187 GDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSIL 246

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHY-VCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           +AC+H   +E G+     ++   + P S      ++D   + G  + A+ +   M+    
Sbjct: 247 SACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKRLFDSMN---- 302

Query: 358 PSDKAIAWRALLSACWNHG 414
                + W A++S    HG
Sbjct: 303 -MRDVVCWNAMISGMAMHG 320


>gb|ESW29575.1| hypothetical protein PHAVU_002G081200g [Phaseolus vulgaris]
          Length = 517

 Score =  160 bits (404), Expect = 2e-37
 Identities = 78/139 (56%), Positives = 99/139 (71%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GNL+LAK+LFD M  +D VCWN MI G A+HG G  ALK+F+ M K  ++PDD T+IA+ 
Sbjct: 286 GNLDLAKRLFDLMPERDIVCWNAMISGTAMHGDGASALKMFSDMEKAGIRPDDVTFIAVF 345

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           TACS+S +  EGLQ    M S Y IEPK+EHY C+VD L RAG F+EA  ++ R+S   +
Sbjct: 346 TACSYSGMAHEGLQLLCKMCSVYKIEPKNEHYSCLVDLLSRAGLFQEAMVMMRRISNLGN 405

Query: 358 PSDKAIAWRALLSACWNHG 414
            SD+ +AWRA LSAC NHG
Sbjct: 406 VSDETLAWRAFLSACCNHG 424



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/138 (23%), Positives = 62/138 (44%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+++ A+  FD    KD   W  MI G   +   ++ L LF  +   +V PD++  ++IL
Sbjct: 185 GDVDSARLFFDEAPEKDRGIWGAMISGYVQNSCFKEGLYLFRLLQLTEVVPDESICVSIL 244

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
           +AC+H   ++ G+     ++   +         ++D   + G    A+ +      D+ P
Sbjct: 245 SACAHLGALDIGIWIHRYLNRAAVPLSIRLSTSLLDMYAKCGNLDLAKRLF-----DLMP 299

Query: 361 SDKAIAWRALLSACWNHG 414
               + W A++S    HG
Sbjct: 300 ERDIVCWNAMISGTAMHG 317


>gb|EOY01760.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
          Length = 523

 Score =  160 bits (404), Expect = 2e-37
 Identities = 78/139 (56%), Positives = 101/139 (72%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GNL++AKKLFD M  +D V WN MI G+A+HG GE AL+LF  M K+ V+PDD T+IA+ 
Sbjct: 286 GNLDIAKKLFDGMQQRDVVSWNAMISGMAMHGDGESALELFWQMEKDGVRPDDITFIAVF 345

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           +ACS+S +  EGL   D M   Y IEPKSEH+ C++D L R G F+EA +II RM    +
Sbjct: 346 SACSYSGMAFEGLTILDRMCKVYNIEPKSEHFGCIIDLLSRGGLFEEANKIIQRMPDSSN 405

Query: 358 PSDKAIAWRALLSACWNHG 414
           PSD+AIAWRALLS+C ++G
Sbjct: 406 PSDEAIAWRALLSSCCSNG 424



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+++ A+ LFD  + KD   W  MI G   +   ++ L +F  M    ++PD+A Y+++L
Sbjct: 185 GDIDTARLLFDEASVKDAGIWGAMISGYVKNNCFKEGLYMFRLMQMSDIEPDEAIYVSVL 244

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEII-GRMSGDVS 357
            AC+H   ++ G+     +             C++D   + G    A+++  G    DV 
Sbjct: 245 CACAHLGALDTGIWIHKYLGKQKFPLSLRLSTCLLDMYAKCGNLDIAKKLFDGMQQRDV- 303

Query: 358 PSDKAIAWRALLSACWNHG 414
                ++W A++S    HG
Sbjct: 304 -----VSWNAMISGMAMHG 317


>ref|XP_004490153.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cicer arietinum]
          Length = 523

 Score =  159 bits (403), Expect = 3e-37
 Identities = 79/139 (56%), Positives = 99/139 (71%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GNL LAK+LFD+M  +D VCWN MI G+A+HG G+ A+KLF  M K  +KPDD T+IA+ 
Sbjct: 289 GNLELAKRLFDSMQERDIVCWNAMISGMAMHGDGKGAVKLFYDMEKVGMKPDDITFIAVF 348

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           TACS+S +  EGL+  D M S Y IEPKSEHY C+VD L RAG F+EA  II R++    
Sbjct: 349 TACSYSGMAFEGLKLLDKMCSVYNIEPKSEHYGCLVDLLSRAGLFEEAMVIIRRITNSWI 408

Query: 358 PSDKAIAWRALLSACWNHG 414
            + + +AWRA LSAC NHG
Sbjct: 409 GNAETLAWRAFLSACCNHG 427



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GN++ A+  FD    KD   W  MI G   +   +++L LF  M    + PD++ +++IL
Sbjct: 187 GNVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIVPDESIFVSIL 246

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHY-VCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           +AC+H   ++ G+     ++   + P S      ++D   + G  + A+ +   M     
Sbjct: 247 SACAHLGALDIGVWIHRYLNRSKMLPLSVRLSTSLLDMYAKCGNLELAKRLFDSMQ---- 302

Query: 358 PSDKAIAWRALLSACWNHG 414
                + W A++S    HG
Sbjct: 303 -ERDIVCWNAMISGMAMHG 320


>ref|XP_004143828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  156 bits (394), Expect = 3e-36
 Identities = 74/139 (53%), Positives = 104/139 (74%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+L+LAK LF+ M+ +D VCWN MI G+A+ G GE A+KLF  M K  +KPD+ T+IA+L
Sbjct: 286 GHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVL 345

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
            ACS+S +V+EG++ ++ MS+ + IEPKSEHY C++D L R G F+EA+ +I R+    S
Sbjct: 346 AACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTAS 405

Query: 358 PSDKAIAWRALLSACWNHG 414
           PS++A+AWRA LSAC  HG
Sbjct: 406 PSEEAVAWRAFLSACCKHG 424



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/132 (26%), Positives = 64/132 (48%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+++ A++LFD  T KDT  W  MI G   +   ++ L +F  M   +V+PD+A  + IL
Sbjct: 185 GDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL 244

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
           +AC+H   ++ G+     +   G+         ++D   + G+   A+ +   MS     
Sbjct: 245 SACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMS----- 299

Query: 361 SDKAIAWRALLS 396
               + W A++S
Sbjct: 300 QRDNVCWNAMIS 311


>ref|XP_004157334.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g20540-like [Cucumis sativus]
          Length = 532

 Score =  153 bits (387), Expect = 2e-35
 Identities = 73/139 (52%), Positives = 103/139 (74%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+L+LAK LF+ M+ +D VCWN MI G+A+ G GE A+KLF  M K  +KPD+ T+IA+ 
Sbjct: 286 GHLDLAKYLFNEMSQRDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVW 345

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
            ACS+S +V+EG++ ++ MS+ + IEPKSEHY C++D L R G F+EA+ +I R+    S
Sbjct: 346 XACSNSGMVDEGIRIWNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTAS 405

Query: 358 PSDKAIAWRALLSACWNHG 414
           PS++A+AWRA LSAC  HG
Sbjct: 406 PSEEAVAWRAFLSACCKHG 424



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/132 (26%), Positives = 64/132 (48%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+++ A++LFD  T KDT  W  MI G   +   ++ L +F  M   +V+PD+A  + IL
Sbjct: 185 GDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAIIVTIL 244

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
           +AC+H   ++ G+     +   G+         ++D   + G+   A+ +   MS     
Sbjct: 245 SACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMS----- 299

Query: 361 SDKAIAWRALLS 396
               + W A++S
Sbjct: 300 QRDNVCWNAMIS 311


>gb|EXB65077.1| hypothetical protein L484_004253 [Morus notabilis]
          Length = 508

 Score =  150 bits (378), Expect = 2e-34
 Identities = 74/139 (53%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GNL+LA+ +F+ M  KDTVCWN MI  +A+HG G+ A +LF  M +  V+PDD T+IAIL
Sbjct: 270 GNLDLARMVFEKMPQKDTVCWNAMISAMAMHGDGDTAFELFEEMEEAGVRPDDITFIAIL 329

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           TACS+S    EG++  D M   Y IEPKSEHY C+VD L RAG F+EA ++I R++   +
Sbjct: 330 TACSYSGRAYEGMRMLDRMCRVYQIEPKSEHYGCIVDLLSRAGLFEEASKMIQRLATSSN 389

Query: 358 PSDKAIAWRALLSACWNHG 414
            S++ +AWRA LSAC  HG
Sbjct: 390 RSEEEMAWRAFLSACCKHG 408



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/138 (23%), Positives = 61/138 (44%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G ++  +  FD    +D   W  MI G   +   ++ L LF  M   +++PD+A ++++L
Sbjct: 169 GEVDKERLFFDLAPVRDRGIWGAMISGYVQNACFKEGLYLFRLMQCAEIEPDEAIFVSVL 228

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
             C+H   ++ G+     +   G+         +VD   + G    A+ +  +M     P
Sbjct: 229 CGCAHLGALDVGVWIHRYLDRLGLPLSVRLGTGLVDMYAKCGNLDLARMVFEKM-----P 283

Query: 361 SDKAIAWRALLSACWNHG 414
               + W A++SA   HG
Sbjct: 284 QKDTVCWNAMISAMAMHG 301


>ref|XP_004237221.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum lycopersicum]
          Length = 586

 Score =  146 bits (369), Expect = 2e-33
 Identities = 69/139 (49%), Positives = 99/139 (71%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G L++A+K+FD M  +D +CWN MI G A++G+G  ALKLF  M K +++PDD T++++ 
Sbjct: 288 GCLDIAEKVFDEMPIRDLICWNAMISGFAVNGNGLKALKLFNEMQKFRIRPDDVTFLSMF 347

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           TACS++ +  EGL   + M + Y IEPK EHY C++D L RAG  +EA++I+  M    +
Sbjct: 348 TACSYAGMANEGLNLLNLMCNVYHIEPKGEHYGCIIDVLSRAGLLEEARKIVQNMPNSSA 407

Query: 358 PSDKAIAWRALLSACWNHG 414
           PS++AIAWRALLSA  NHG
Sbjct: 408 PSEEAIAWRALLSASGNHG 426


>ref|XP_006344328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum tuberosum]
          Length = 530

 Score =  145 bits (367), Expect = 4e-33
 Identities = 70/139 (50%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G L++A+K+FD M  +D +CWN MI G A++G+G  ALKLF  M K + +PDD T+I++ 
Sbjct: 288 GCLDIAEKVFDEMPIRDLICWNAMISGFAVNGNGLKALKLFNEMQKSRTRPDDVTFISMF 347

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           TACS++ +  EGL   + M + Y IEPK EHY C++D L RAG  +EA++I+  M     
Sbjct: 348 TACSYAGMANEGLNLLNLMCNVYHIEPKGEHYGCIIDVLSRAGLVEEARKIVQNMPNSSV 407

Query: 358 PSDKAIAWRALLSACWNHG 414
           PS++AIAWRALLSA  NHG
Sbjct: 408 PSEEAIAWRALLSASGNHG 426


>gb|EXB45758.1| hypothetical protein L484_003842 [Morus notabilis]
          Length = 633

 Score =  137 bits (344), Expect = 2e-30
 Identities = 64/139 (46%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G++  A  +FD M +KD   WN+MI+G  IHG+G++AL +FA M + Q+KPD+ T++ +L
Sbjct: 397 GSMRNACMIFDKMRNKDVASWNIMIMGYGIHGYGKEALDMFARMCETQLKPDEVTFVGVL 456

Query: 181 TACSHSRLVEEGLQAFDSM-SSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           +AC+H+ L+ +G   F  M ++YGI P  EHY C++D LGRAG  KEA E++  M  + +
Sbjct: 457 SACNHAGLLRQGRDFFTQMKTNYGITPTIEHYTCVIDMLGRAGKLKEAYELVRTMPIEAN 516

Query: 358 PSDKAIAWRALLSACWNHG 414
           P    I WRALL+AC  HG
Sbjct: 517 P----IVWRALLAACRLHG 531


>gb|EMJ14805.1| hypothetical protein PRUPE_ppa002332mg [Prunus persica]
          Length = 686

 Score =  136 bits (343), Expect = 3e-30
 Identities = 66/138 (47%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G L L++++FD M  +DTV WN MI+  ++HG+GE+AL LF  M+  +VKP+  T+  +L
Sbjct: 363 GELELSRRVFDMMPRRDTVAWNTMIIANSMHGNGEEALLLFRKMLDSRVKPNSVTFTGVL 422

Query: 181 TACSHSRLVEEGLQAFDSM-SSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
             CSHSRLV+EG+  FDSM   + +EP ++HY CMVD L RAG+ +EA + I RM  + +
Sbjct: 423 CGCSHSRLVDEGIMVFDSMRRDHSVEPDADHYSCMVDVLSRAGHLEEAYQFIQRMPMEPT 482

Query: 358 PSDKAIAWRALLSACWNH 411
           P     AW ALL AC  H
Sbjct: 483 PG----AWGALLGACRVH 496



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/138 (24%), Positives = 62/138 (44%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+L  A+ LFD +   D   W V+I G   HG  ++++KL+  +    + PD+   +++ 
Sbjct: 25  GDLQRARHLFDQIPHPDLRAWTVLISGHTRHGFPKESIKLYTSLRGRHIVPDNLLLLSVA 84

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
            AC+    + +  +  D    +G          MVD  G+  Y   A+++      D  P
Sbjct: 85  KACASLGDLRDAKELHDEAIRFGFHSDIALGNAMVDMFGKCKYVDGARQVF-----DDMP 139

Query: 361 SDKAIAWRALLSACWNHG 414
           +   ++W +L S   N G
Sbjct: 140 AKDVVSWTSLCSCYVNCG 157


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  136 bits (343), Expect = 3e-30
 Identities = 74/138 (53%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GN+N A+KLF+ M  +D V W  MIL   IHGHGEDAL LF+ M +   K D   + AIL
Sbjct: 472 GNVNTAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAIL 531

Query: 181 TACSHSRLVEEGLQAFDSM-SSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           TACSH+ LV++GLQ F  M S YG+ PK EHY C+VD LGRAG+  EA  II  MS  + 
Sbjct: 532 TACSHAGLVDQGLQYFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMS--LE 589

Query: 358 PSDKAIAWRALLSACWNH 411
           P   A  W ALL AC  H
Sbjct: 590 PD--ANVWGALLGACRIH 605



 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 46/138 (33%), Positives = 68/138 (49%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GN+N A KLF+ M  K+ V WN +I G + HGH  +AL LF  M  + +KPD    +++L
Sbjct: 371 GNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVL 430

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
            AC+H   +E+G Q        G E        +VD   + G    AQ++  RM     P
Sbjct: 431 PACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERM-----P 485

Query: 361 SDKAIAWRALLSACWNHG 414
               ++W  ++ A   HG
Sbjct: 486 EQDVVSWTTMILAYGIHG 503



 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 41/138 (29%), Positives = 65/138 (47%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GN+N A KLF+ M  +D   WN +I G +++    +AL  F  M    +KP+  T +++L
Sbjct: 270 GNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVL 329

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
            AC+H   +E+G Q        G E        +V+   + G    A ++  RM     P
Sbjct: 330 PACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERM-----P 384

Query: 361 SDKAIAWRALLSACWNHG 414
               +AW A++S    HG
Sbjct: 385 KKNVVAWNAIISGYSQHG 402



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 37/131 (28%), Positives = 65/131 (49%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G+L  A+++FD M  +D V WN +I G + +G   +AL LF+ M    +KP+ +T ++++
Sbjct: 169 GSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVM 228

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
             C+H   +E+G Q        GIE        +V+   + G    A ++  RM     P
Sbjct: 229 PVCAHLLALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERM-----P 283

Query: 361 SDKAIAWRALL 393
                +W A++
Sbjct: 284 IRDVASWNAII 294


>emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
          Length = 643

 Score =  136 bits (343), Expect = 3e-30
 Identities = 69/139 (49%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G ++LA ++F+AM SKD + WN +I G+AIHGH ++A +LF  M +  V+P+D T++A+L
Sbjct: 243 GKISLATQVFNAMESKDVLAWNTIIAGMAIHGHVKEAQQLFKEMKEASVEPNDITFVAML 302

Query: 181 TACSHSRLVEEGLQAFDSM-SSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           +ACSH+ +V+EG +  D M SSYGIEPK EHY C++D L RAG  +EA E+IG M  + +
Sbjct: 303 SACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYDCVIDLLARAGLLEEAMELIGTMPMEPN 362

Query: 358 PSDKAIAWRALLSACWNHG 414
           PS    A  ALL  C  HG
Sbjct: 363 PS----ALGALLGGCRIHG 377



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 42/138 (30%), Positives = 65/138 (47%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GN+  A  LF  M  +D V WN M+   A  G   +AL LF  M    VKP +AT +++L
Sbjct: 142 GNVEEAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 201

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
           +AC+H   +++GL     ++   IE  S     +VD   + G    A ++   M      
Sbjct: 202 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME----- 256

Query: 361 SDKAIAWRALLSACWNHG 414
           S   +AW  +++    HG
Sbjct: 257 SKDVLAWNTIIAGMAIHG 274


>ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g43790 gi|10177948|dbj|BAB11307.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332007627|gb|AED95010.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 460

 Score =  135 bits (341), Expect = 4e-30
 Identities = 66/139 (47%), Positives = 97/139 (69%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G L+ A+K+FD M+ +D  C+N MI GLA+HG G++ ++L+  ++ + + PD AT++  +
Sbjct: 265 GCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTI 324

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           +ACSHS LV+EGLQ F+SM + YGIEPK EHY C+VD LGR+G  +EA+E I +M   V 
Sbjct: 325 SACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM--PVK 382

Query: 358 PSDKAIAWRALLSACWNHG 414
           P+  A  WR+ L +   HG
Sbjct: 383 PN--ATLWRSFLGSSQTHG 399


>ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 762

 Score =  135 bits (341), Expect = 4e-30
 Identities = 69/139 (49%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G ++LA ++F+AM SKD + WN +I G+AIHG+ ++A +LF  M +  V+P+D T++AIL
Sbjct: 438 GKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAIL 497

Query: 181 TACSHSRLVEEGLQAFDSM-SSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           +ACSH+ +V+EG +  D M SSYGIEPK EHY C++D L RAG+ +EA E+IG M  + +
Sbjct: 498 SACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPN 557

Query: 358 PSDKAIAWRALLSACWNHG 414
           PS    A  ALL  C  HG
Sbjct: 558 PS----ALGALLGGCRIHG 572



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/138 (30%), Positives = 65/138 (47%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           GN+  A  LF  M  +D V WN M+   A  G   +AL LF  M    VKP +AT +++L
Sbjct: 337 GNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLL 396

Query: 181 TACSHSRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSP 360
           +AC+H   +++GL     ++   IE  S     +VD   + G    A ++   M      
Sbjct: 397 SACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME----- 451

Query: 361 SDKAIAWRALLSACWNHG 414
           S   +AW  +++    HG
Sbjct: 452 SKDVLAWNTIIAGMAIHG 469


>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g43790-like [Glycine max]
          Length = 591

 Score =  135 bits (341), Expect = 4e-30
 Identities = 70/139 (50%), Positives = 91/139 (65%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G LNLA +LFD ++ +DT C+N MI G A+HGHG  AL+L+  M  E + PD AT +  +
Sbjct: 268 GCLNLACQLFDELSDRDTFCYNAMIGGFAVHGHGNQALELYRNMKLEDLVPDGATIVVTM 327

Query: 181 TACSHSRLVEEGLQAFDSMSS-YGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
            ACSH  LVEEGL+ F+SM   +G+EPK EHY C++D LGRAG  KEA+E +     D+ 
Sbjct: 328 FACSHGGLVEEGLEIFESMKGVHGMEPKLEHYGCLIDLLGRAGRLKEAEERL----QDMP 383

Query: 358 PSDKAIAWRALLSACWNHG 414
               AI WR+LL A   HG
Sbjct: 384 MKPNAILWRSLLGAAKLHG 402


>emb|CBI29077.3| unnamed protein product [Vitis vinifera]
          Length = 671

 Score =  135 bits (341), Expect = 4e-30
 Identities = 69/139 (49%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   GNLNLAKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAIL 180
           G ++LA ++F+AM SKD + WN +I G+AIHG+ ++A +LF  M +  V+P+D T++AIL
Sbjct: 347 GKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVAIL 406

Query: 181 TACSHSRLVEEGLQAFDSM-SSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVS 357
           +ACSH+ +V+EG +  D M SSYGIEPK EHY C++D L RAG+ +EA E+IG M  + +
Sbjct: 407 SACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPMEPN 466

Query: 358 PSDKAIAWRALLSACWNHG 414
           PS    A  ALL  C  HG
Sbjct: 467 PS----ALGALLGGCRIHG 481



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 42/133 (31%), Positives = 66/133 (49%)
 Frame = +1

Query: 16  AKKLFDAMTSKDTVCWNVMILGLAIHGHGEDALKLFACMMKEQVKPDDATYIAILTACSH 195
           A+ +FD M  +D + WN MI G AI G   +AL LF  M    VKP +AT +++L+AC+H
Sbjct: 251 ARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACAH 310

Query: 196 SRLVEEGLQAFDSMSSYGIEPKSEHYVCMVDSLGRAGYFKEAQEIIGRMSGDVSPSDKAI 375
              +++GL     ++   IE  S     +VD   + G    A ++   M      S   +
Sbjct: 311 LGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAME-----SKDVL 365

Query: 376 AWRALLSACWNHG 414
           AW  +++    HG
Sbjct: 366 AWNTIIAGMAIHG 378