BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040052
         (222 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein...   144   1e-32
gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-bind...   144   1e-32
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   142   5e-32
pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-har...   142   5e-32
gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-bind...   142   5e-32
dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein...   142   6e-32
ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1...   142   6e-32
ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 5...   142   6e-32
gb|AAA33700.1| Major Cab protein [Petunia x hybrida]                  142   6e-32
gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]    142   6e-32
sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding pro...   142   6e-32
gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-bind...   142   6e-32
sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding prote...   141   1e-31
ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 4...   141   1e-31
ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 4...   141   1e-31
gb|EMJ13068.1| hypothetical protein PRUPE_ppa010099mg [Prunus pe...   141   1e-31
gb|EMJ13063.1| hypothetical protein PRUPE_ppa010081mg [Prunus pe...   141   1e-31
pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting ...   141   1e-31
gb|AEZ49172.1| chlorophyll a/b binding protein of LHCII type I [...   141   1e-31
pdb|2BHW|A Chain A, Pea Light-Harvesting Complex Ii At 2.5 Angst...   141   1e-31

>dbj|BAA03104.1| light-harvesting chlorophyll a/b-binding protein (LHCP) precursor
           [Lactuca sativa]
          Length = 266

 Score =  144 bits (363), Expect = 1e-32
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW
Sbjct: 197 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 256

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 257 SYATNFVPGK 266


>gb|ABW89213.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Helianthus annuus] gi|159138423|gb|ABW89214.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138425|gb|ABW89215.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138429|gb|ABW89217.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138433|gb|ABW89219.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138437|gb|ABW89221.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138439|gb|ABW89222.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138441|gb|ABW89223.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138443|gb|ABW89224.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138445|gb|ABW89225.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138447|gb|ABW89226.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138451|gb|ABW89228.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138453|gb|ABW89229.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138455|gb|ABW89230.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138457|gb|ABW89231.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus]
          Length = 116

 Score =  144 bits (363), Expect = 1e-32
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW
Sbjct: 47  PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 106

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 107 SYATNFVPGK 116


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  142 bits (358), Expect = 5e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 198 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 257

Query: 183 NYATNFVPGK 212
           N+ATNFVPGK
Sbjct: 258 NFATNFVPGK 267


>pdb|1RWT|A Chain A, Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
           gi|47168889|pdb|1RWT|B Chain B, Crystal Structure Of
           Spinach Major Light-harvesting Complex At 2.72 Angstrom
           Resolution gi|47168890|pdb|1RWT|C Chain C, Crystal
           Structure Of Spinach Major Light-harvesting Complex At
           2.72 Angstrom Resolution gi|47168891|pdb|1RWT|D Chain D,
           Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
           gi|47168892|pdb|1RWT|E Chain E, Crystal Structure Of
           Spinach Major Light-harvesting Complex At 2.72 Angstrom
           Resolution gi|47168893|pdb|1RWT|F Chain F, Crystal
           Structure Of Spinach Major Light-harvesting Complex At
           2.72 Angstrom Resolution gi|47168894|pdb|1RWT|G Chain G,
           Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
           gi|47168895|pdb|1RWT|H Chain H, Crystal Structure Of
           Spinach Major Light-harvesting Complex At 2.72 Angstrom
           Resolution gi|47168896|pdb|1RWT|I Chain I, Crystal
           Structure Of Spinach Major Light-harvesting Complex At
           2.72 Angstrom Resolution gi|47168897|pdb|1RWT|J Chain J,
           Crystal Structure Of Spinach Major Light-harvesting
           Complex At 2.72 Angstrom Resolution
          Length = 232

 Score =  142 bits (358), Expect = 5e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 163 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 222

Query: 183 NYATNFVPGK 212
           N+ATNFVPGK
Sbjct: 223 NFATNFVPGK 232


>gb|ABW89216.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Helianthus annuus] gi|159138431|gb|ABW89218.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus] gi|159138435|gb|ABW89220.1|
           chloroplast light-harvesting chlorophyll a/b-binding
           protein [Helianthus annuus]
          Length = 116

 Score =  142 bits (358), Expect = 5e-32
 Identities = 68/69 (98%), Positives = 69/69 (100%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW
Sbjct: 47  PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 106

Query: 183 NYATNFVPG 209
           +YATNFVPG
Sbjct: 107 SYATNFVPG 115


>dbj|BAA25390.1| light harvesting chlorophyll a/b-binding protein [Nicotiana
           sylvestris]
          Length = 265

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 196 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 255

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 256 SYATNFVPGK 265


>ref|XP_006368025.1| PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like
           [Solanum tuberosum]
          Length = 265

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 196 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 255

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 256 SYATNFVPGK 265


>ref|XP_006364025.1| PREDICTED: chlorophyll a-b binding protein 50, chloroplastic-like
           [Solanum tuberosum]
          Length = 267

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 198 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 257

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 258 SYATNFVPGK 267


>gb|AAA33700.1| Major Cab protein [Petunia x hybrida]
          Length = 76

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 7   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 66

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 67  SYATNFVPGK 76


>gb|AAA80592.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 265

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 196 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 255

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 256 SYATNFVPGK 265


>sp|P04783.1|CB25_PETSP RecName: Full=Chlorophyll a-b binding protein 91R, chloroplastic;
           AltName: Full=LHCII type I CAB-91R; Short=LHCP; Flags:
           Precursor gi|20487|emb|CAA26209.1| unnamed protein
           product [Petunia sp.]
          Length = 267

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 198 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 257

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 258 SYATNFVPGK 267


>gb|ABW89227.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Helianthus annuus]
          Length = 116

 Score =  142 bits (357), Expect = 6e-32
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDP AFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW
Sbjct: 47  PLGLADDPXAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 106

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 107 SYATNFVPGK 116


>sp|P07371.1|CB22_PEA RecName: Full=Chlorophyll a-b binding protein AB80, chloroplastic;
           AltName: Full=LHCII type I CAB-AB80; Short=LHCP; Flags:
           Precursor gi|169053|gb|AAA63413.1| cab precursor [Pisum
           sativum] gi|169055|gb|AAA33651.1| polypeptide 15
           precursor [Pisum sativum] gi|223990|prf||1006296A
           protein,chlorophyll a/b binding
          Length = 269

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 200 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 259

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 260 SYATNFVPGK 269


>ref|XP_004293580.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 263

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 194 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 253

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 254 SYATNFVPGK 263


>ref|XP_004293579.1| PREDICTED: chlorophyll a-b binding protein 40, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 263

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 194 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 253

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 254 SYATNFVPGK 263


>gb|EMJ13068.1| hypothetical protein PRUPE_ppa010099mg [Prunus persica]
          Length = 264

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 195 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 254

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 255 SYATNFVPGK 264


>gb|EMJ13063.1| hypothetical protein PRUPE_ppa010081mg [Prunus persica]
          Length = 265

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 196 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 255

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 256 SYATNFVPGK 265


>pdb|1VCR|A Chain A, An Icosahedral Assembly Of Light-Harvesting Chlorophyll AB
           Protein Complex From Pea Thylakoid Membranes
          Length = 232

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 163 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 222

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 223 SYATNFVPGK 232


>gb|AEZ49172.1| chlorophyll a/b binding protein of LHCII type I [Wolffia
           australiana]
          Length = 264

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/69 (97%), Positives = 69/69 (100%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENL+DHLADPVANNAW
Sbjct: 195 PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLSDHLADPVANNAW 254

Query: 183 NYATNFVPG 209
           +YATNFVPG
Sbjct: 255 SYATNFVPG 263


>pdb|2BHW|A Chain A, Pea Light-Harvesting Complex Ii At 2.5 Angstrom Resolution
           gi|109157230|pdb|2BHW|B Chain B, Pea Light-Harvesting
           Complex Ii At 2.5 Angstrom Resolution
           gi|109157231|pdb|2BHW|C Chain C, Pea Light-Harvesting
           Complex Ii At 2.5 Angstrom Resolution
          Length = 232

 Score =  141 bits (355), Expect = 1e-31
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   PLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVANNAW 182
           PLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPV NNAW
Sbjct: 163 PLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAW 222

Query: 183 NYATNFVPGK 212
           +YATNFVPGK
Sbjct: 223 SYATNFVPGK 232