BLASTX nr result

ID: Zingiber24_contig00040051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00040051
         (575 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004303781.1| PREDICTED: histone acetyltransferase HAC1-li...    64   2e-08
ref|XP_002513288.1| transcription cofactor, putative [Ricinus co...    57   3e-06
gb|AFW70076.1| hypothetical protein ZEAMMB73_813704 [Zea mays]         57   4e-06

>ref|XP_004303781.1| PREDICTED: histone acetyltransferase HAC1-like [Fragaria vesca subsp.
            vesca]
          Length = 1694

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
 Frame = +1

Query: 4    SRKLVKHIHNCAEADCPVCIPVRGHIAANNKAHSNPLSETYLLPEIKGDVNGVKTDVIS- 180
            ++KLV+H  +C ++ CPVC+PV+ +I  +NK       E+ +   I G      +   S 
Sbjct: 688  TKKLVRHHRSCLDSACPVCVPVKNYIQTHNKVPIQ-FPESGVQKSINGSSKAYDSVDTSA 746

Query: 181  ---------YEGSQGEQPATKRLKVQHMS------------TESSNDVSSGNQYYNIQDF 297
                      E S+  QP+ KRLK++  S            T S+N+    +Q   IQDF
Sbjct: 747  RLMTKTLPVVETSEDPQPSMKRLKIEQSSQPIVPDSVSNAVTVSANNEPHVSQDIQIQDF 806

Query: 298  QDPECKQTILKTFSNSYSDVKINKSSDCGQRQLPEFNSSIKEN 426
            Q  E    I     + +++VK+      GQ  L E   S +EN
Sbjct: 807  QHSEISMPI----KSEFTEVKMEAPLSSGQGNLDEMKDSFEEN 845


>ref|XP_002513288.1| transcription cofactor, putative [Ricinus communis]
            gi|223547196|gb|EEF48691.1| transcription cofactor,
            putative [Ricinus communis]
          Length = 1720

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
 Frame = +1

Query: 4    SRKLVKHIHNCAEADCPVCIPVRGHIAANNKAHSNPLSETYL--LPEIKGDVNGVK--TD 171
            +R L++H  +C +  CPVCIPV+ +I A  +  + P+S+  L   P   GD N  K  + 
Sbjct: 716  TRILIRHNKHCRDVGCPVCIPVKNYIEAQMRPRTRPVSDPGLSSKPNDIGD-NTAKLISK 774

Query: 172  VISYEGSQGEQPATKRLKVQHMSTESSNDVSSGNQYYNI-------QDFQDPECKQ-TIL 327
              S E S+   P+ KR+K++  S     +  S     ++       QD Q  + KQ    
Sbjct: 775  YPSVETSEELHPSLKRMKIEQSSRSLKPESESSAVSASVTADSLVSQDAQHQDYKQGDTT 834

Query: 328  KTFSNSYSDVKINKSSDCGQRQLPEFNSSIKENMDLTGCE 447
                + Y +VK+      GQ   P  N   K+NMD T  +
Sbjct: 835  MPVKSEYMEVKLEGPISSGQGS-PSKNEKKKDNMDDTNSQ 873


>gb|AFW70076.1| hypothetical protein ZEAMMB73_813704 [Zea mays]
          Length = 1720

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 12/200 (6%)
 Frame = +1

Query: 4    SRKLVKHIHNCAEADCPVCIPVRGHI------AANNKA-HSNPLSETYLLPEIKGDVNGV 162
            S+ +  H   C +  CPVC  VR  +      A+  KA  S  L++  +   I   + G 
Sbjct: 717  SKMMSHHYKTCVDEQCPVCSVVRKFLRQSTEQASKQKALESRKLAQQNVPQRIMNGIEGD 776

Query: 163  KTDV--ISYEGSQGEQPATKRLKVQHMSTES-SNDVSSGNQYYNIQDFQDPECKQTILKT 333
            + DV  +S E    +    KRLK    S     ND+S  + Y+    F   E +   L  
Sbjct: 777  RMDVDPMSVEAFDDQPFVPKRLKTHPPSPSGLENDISVVSNYHVNSGFALQETQPEQLDH 836

Query: 334  FSN-SYSDVKINKSSDCGQRQLP-EFNSSIKENMDLTGCENYPNVSSSVGSHVDQASIVD 507
             +  SY   +++  +D    Q P + +  I  N+  +     P V S + SH+ Q +++ 
Sbjct: 837  NNRTSYLKREVDAKADMRAPQKPIKISYGIDGNVTASRHNVIPGVPSEINSHIKQENLLV 896

Query: 508  NKLLDQAAGKIKELDNQPTD 567
            +K   + A ++K   N PTD
Sbjct: 897  DKETSETALEVKNETNDPTD 916


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