BLASTX nr result
ID: Zingiber24_contig00039879
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00039879
(301 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320267.1| zinc finger family protein [Populus trichoca... 84 3e-14
ref|XP_002302796.1| zinc finger family protein [Populus trichoca... 78 1e-12
gb|EOX95403.1| RING/U-box superfamily protein, putative isoform ... 77 3e-12
gb|EOX95402.1| RING/U-box superfamily protein, putative isoform ... 77 3e-12
gb|EOX95399.1| RING/U-box superfamily protein, putative isoform ... 77 3e-12
ref|XP_006345360.1| PREDICTED: zinc finger protein 598-like [Sol... 76 4e-12
ref|XP_004229162.1| PREDICTED: uncharacterized protein LOC101255... 75 9e-12
ref|XP_002515209.1| conserved hypothetical protein [Ricinus comm... 74 2e-11
gb|EXB44445.1| LIM domain and RING finger protein [Morus notabilis] 73 3e-11
ref|XP_006492393.1| PREDICTED: LIM domain and RING finger protei... 72 8e-11
ref|XP_006444589.1| hypothetical protein CICLE_v10018861mg [Citr... 72 8e-11
ref|XP_003632382.1| PREDICTED: uncharacterized protein LOC100262... 70 2e-10
ref|XP_003626029.1| LIM domain and RING finger protein [Medicago... 70 2e-10
ref|XP_003520767.1| PREDICTED: zinc finger protein 598-like [Gly... 70 3e-10
ref|XP_004494458.1| PREDICTED: zinc finger protein 598-like [Cic... 70 4e-10
ref|XP_004307075.1| PREDICTED: uncharacterized protein LOC101294... 70 4e-10
ref|XP_004135963.1| PREDICTED: uncharacterized protein LOC101214... 69 6e-10
gb|ESW35216.1| hypothetical protein PHAVU_001G216400g [Phaseolus... 69 8e-10
ref|XP_002878444.1| zinc finger family protein [Arabidopsis lyra... 68 1e-09
ref|XP_002468354.1| hypothetical protein SORBIDRAFT_01g044380 [S... 68 1e-09
>ref|XP_002320267.1| zinc finger family protein [Populus trichocarpa]
gi|222861040|gb|EEE98582.1| zinc finger family protein
[Populus trichocarpa]
Length = 812
Score = 83.6 bits (205), Expect = 3e-14
Identities = 40/72 (55%), Positives = 48/72 (66%)
Frame = +2
Query: 2 QNLADGGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGSSETQPVRG 181
+N+ DGG+ KQRKKTSKF+RVRLGDGS AAL D D P D + + PVRG
Sbjct: 741 KNIKDGGNEKQRKKTSKFHRVRLGDGSMAALLDLQSSDPDPHNTGENRIDDNGNSGPVRG 800
Query: 182 VWRSGGAQRLFA 217
VWR GG Q+LF+
Sbjct: 801 VWRKGGGQKLFS 812
>ref|XP_002302796.1| zinc finger family protein [Populus trichocarpa]
gi|222844522|gb|EEE82069.1| zinc finger family protein
[Populus trichocarpa]
Length = 819
Score = 77.8 bits (190), Expect = 1e-12
Identities = 43/74 (58%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Frame = +2
Query: 2 QNLADGGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIP-EPQENRNADGSSET--QP 172
+NL DGG+ KQRKKTSK +R RLGDGS AAL D + P E ENR D S+ P
Sbjct: 745 KNLKDGGTEKQRKKTSKVHRARLGDGSMAALLDLQNSEPDPRETVENRIDDSSNSVGGLP 804
Query: 173 VRGVWRSGGAQRLF 214
VRGVWR GG Q+LF
Sbjct: 805 VRGVWRKGGGQKLF 818
>gb|EOX95403.1| RING/U-box superfamily protein, putative isoform 5 [Theobroma
cacao]
Length = 624
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGSSETQ---PVRGVW 187
GG SKQRKKTSKF+R+RLGDGS AAL D + PEP + + DGS + P+RGVW
Sbjct: 556 GGGSKQRKKTSKFHRLRLGDGSMAALLDHKSSEPDPEPLD-KKFDGSQNSTGGLPIRGVW 614
Query: 188 RSGGAQRLF 214
+ GG+Q+LF
Sbjct: 615 KKGGSQKLF 623
>gb|EOX95402.1| RING/U-box superfamily protein, putative isoform 4 [Theobroma
cacao]
Length = 800
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGSSETQ---PVRGVW 187
GG SKQRKKTSKF+R+RLGDGS AAL D + PEP + + DGS + P+RGVW
Sbjct: 732 GGGSKQRKKTSKFHRLRLGDGSMAALLDHKSSEPDPEPLD-KKFDGSQNSTGGLPIRGVW 790
Query: 188 RSGGAQRLF 214
+ GG+Q+LF
Sbjct: 791 KKGGSQKLF 799
>gb|EOX95399.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma
cacao] gi|508703504|gb|EOX95400.1| Alpha/beta-Hydrolases
superfamily protein isoform 1 [Theobroma cacao]
gi|508703505|gb|EOX95401.1| RING/U-box superfamily
protein, putative isoform 1 [Theobroma cacao]
Length = 830
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGSSETQ---PVRGVW 187
GG SKQRKKTSKF+R+RLGDGS AAL D + PEP + + DGS + P+RGVW
Sbjct: 762 GGGSKQRKKTSKFHRLRLGDGSMAALLDHKSSEPDPEPLD-KKFDGSQNSTGGLPIRGVW 820
Query: 188 RSGGAQRLF 214
+ GG+Q+LF
Sbjct: 821 KKGGSQKLF 829
>ref|XP_006345360.1| PREDICTED: zinc finger protein 598-like [Solanum tuberosum]
Length = 880
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/74 (55%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Frame = +2
Query: 20 GSSKQRKKTSKFNRVRLGDGSAAAL--FDPSRRDAIPEPQENRNADGSS--ETQPVRGVW 187
G KQRKKTSKF+RVRLGDGS L F+ S D P+P +D S E+ PVRGVW
Sbjct: 803 GKGKQRKKTSKFHRVRLGDGSVETLLNFNSSNPDLDPDPDRKETSDDQSNPESLPVRGVW 862
Query: 188 RSGGAQRLFANSSK 229
R+GG Q+L A +SK
Sbjct: 863 RNGGGQKLVAMTSK 876
>ref|XP_004229162.1| PREDICTED: uncharacterized protein LOC101255131 [Solanum
lycopersicum]
Length = 879
Score = 75.1 bits (183), Expect = 9e-12
Identities = 40/74 (54%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Frame = +2
Query: 20 GSSKQRKKTSKFNRVRLGDGSAAAL--FDPSRRDAIPEPQENRNAD--GSSETQPVRGVW 187
G KQRKKTSKF+RVRLGDGS L + S D P P + +D G+ E+ PVRGVW
Sbjct: 802 GKGKQRKKTSKFHRVRLGDGSVETLLNLNSSNPDLDPNPDQKETSDDQGNPESLPVRGVW 861
Query: 188 RSGGAQRLFANSSK 229
R+GG Q+L A +SK
Sbjct: 862 RNGGGQKLVAMTSK 875
>ref|XP_002515209.1| conserved hypothetical protein [Ricinus communis]
gi|223545689|gb|EEF47193.1| conserved hypothetical
protein [Ricinus communis]
Length = 658
Score = 73.9 bits (180), Expect = 2e-11
Identities = 43/78 (55%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Frame = +2
Query: 2 QNLADGGS-SKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGS------S 160
QN D GS ++QRKKTSKF+RVRLGDGS AALFD + P+P N D S S
Sbjct: 580 QNGRDAGSGNRQRKKTSKFHRVRLGDGSMAALFDLKNSEPDPDPDPNPVDDPSDVNNNPS 639
Query: 161 ETQPVRGVWRSGGAQRLF 214
PVRGVWR GG +LF
Sbjct: 640 GGLPVRGVWRKGGGHKLF 657
>gb|EXB44445.1| LIM domain and RING finger protein [Morus notabilis]
Length = 821
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/71 (54%), Positives = 47/71 (66%), Gaps = 4/71 (5%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENR-NADGSSETQ---PVRGV 184
GG SKQRKKTSKF+RVRLGDGS AAL D +R D P+ + DG+ + PV GV
Sbjct: 751 GGGSKQRKKTSKFHRVRLGDGSVAALLDLNRSDPHPDSDPTKEQLDGNGNSAGGLPVSGV 810
Query: 185 WRSGGAQRLFA 217
WR+GG RL +
Sbjct: 811 WRNGGGHRLLS 821
>ref|XP_006492393.1| PREDICTED: LIM domain and RING finger protein YDR266C-like [Citrus
sinensis]
Length = 833
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQE-NRNADGSSETQ-----PVR 178
GG KQRKKTSKF+RVRLGDGS AAL D D P+P+ + DG+ PVR
Sbjct: 761 GGGGKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVR 820
Query: 179 GVWRSGGAQRLFA 217
GVW+ GG +LF+
Sbjct: 821 GVWKRGGGHKLFS 833
>ref|XP_006444589.1| hypothetical protein CICLE_v10018861mg [Citrus clementina]
gi|557546851|gb|ESR57829.1| hypothetical protein
CICLE_v10018861mg [Citrus clementina]
Length = 833
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/73 (52%), Positives = 46/73 (63%), Gaps = 6/73 (8%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQE-NRNADGSSETQ-----PVR 178
GG KQRKKTSKF+RVRLGDGS AAL D D P+P+ + DG+ PVR
Sbjct: 761 GGGGKQRKKTSKFHRVRLGDGSMAALLDLKNSDTGPDPEPLDSRLDGNQNPAEGLPVPVR 820
Query: 179 GVWRSGGAQRLFA 217
GVW+ GG +LF+
Sbjct: 821 GVWKRGGGHKLFS 833
>ref|XP_003632382.1| PREDICTED: uncharacterized protein LOC100262296 [Vitis vinifera]
Length = 842
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/79 (51%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Frame = +2
Query: 2 QNL-ADGGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEP-QENRNAD-GSSETQP 172
QNL A G S++RKK SKF R RLGDGS AL + D P+P +E +A+ +E P
Sbjct: 762 QNLGAVSGGSQRRKKASKFLRARLGDGSVGALLNSQDPDPDPDPVEETLDANMNPAEGLP 821
Query: 173 VRGVWRSGGAQRLFANSSK 229
V GVWR+GG QRLF+N K
Sbjct: 822 VHGVWRNGGGQRLFSNGQK 840
>ref|XP_003626029.1| LIM domain and RING finger protein [Medicago truncatula]
gi|355501044|gb|AES82247.1| LIM domain and RING finger
protein [Medicago truncatula]
Length = 860
Score = 70.5 bits (171), Expect = 2e-10
Identities = 41/76 (53%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Frame = +2
Query: 2 QNLADGGS-SKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQE----NRNADGSSET 166
QN DGG +KQRKK SKF RVRLGDGSA+AL D +P N N + S
Sbjct: 784 QNKEDGGGGNKQRKKASKFLRVRLGDGSASALLDLENSRTTSDPGTTDTLNGNNNDSGVG 843
Query: 167 QPVRGVWRSGGAQRLF 214
PVRGVWR GG Q+LF
Sbjct: 844 LPVRGVWRKGGGQKLF 859
>ref|XP_003520767.1| PREDICTED: zinc finger protein 598-like [Glycine max]
Length = 832
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/67 (56%), Positives = 42/67 (62%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGSSETQPVRGVWRSG 196
GG +KQRKKTSKF RVRLGDGS +AL D S D N D S PVRGVWR G
Sbjct: 768 GGGNKQRKKTSKFLRVRLGDGSVSALLDQS--DPGTTDGSEGNKDDSGGGPPVRGVWRKG 825
Query: 197 GAQRLFA 217
G +LF+
Sbjct: 826 GGNKLFS 832
>ref|XP_004494458.1| PREDICTED: zinc finger protein 598-like [Cicer arietinum]
Length = 838
Score = 69.7 bits (169), Expect = 4e-10
Identities = 39/77 (50%), Positives = 47/77 (61%), Gaps = 5/77 (6%)
Frame = +2
Query: 2 QNLADGGS-SKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGSSETQ--- 169
QN DGG +KQRKK SKF RVRLGDGSA+AL D + + DG++
Sbjct: 762 QNKEDGGGGNKQRKKASKFLRVRLGDGSASALLDLDNSHTASDHGTANSLDGNNNDSGGG 821
Query: 170 -PVRGVWRSGGAQRLFA 217
PVRGVWR GG Q+LF+
Sbjct: 822 LPVRGVWRKGGVQKLFS 838
>ref|XP_004307075.1| PREDICTED: uncharacterized protein LOC101294793 [Fragaria vesca
subsp. vesca]
Length = 852
Score = 69.7 bits (169), Expect = 4e-10
Identities = 39/70 (55%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGSSETQ---PVRGVW 187
GG SKQRKKTSKF+RVRLGDGSAAAL D D P+ DGS + PV GVW
Sbjct: 784 GGGSKQRKKTSKFHRVRLGDGSAAALLDLKNSDPQPD-NGGEQLDGSGNSAGGLPVHGVW 842
Query: 188 RSGGAQRLFA 217
R A +LF+
Sbjct: 843 RHKAANKLFS 852
>ref|XP_004135963.1| PREDICTED: uncharacterized protein LOC101214376 [Cucumis sativus]
gi|449488786|ref|XP_004158171.1| PREDICTED:
uncharacterized protein LOC101227037 [Cucumis sativus]
Length = 824
Score = 68.9 bits (167), Expect = 6e-10
Identities = 39/70 (55%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAALFD--PSRRDAIPEPQEN-RNADGSSETQPVRGVW 187
GG SKQ+KKTSKF+RVRLGDGS AAL D S + P+P E + + + PVRGVW
Sbjct: 756 GGGSKQKKKTSKFHRVRLGDGSVAALLDLKNSNLGSDPDPDERVEDRNNGAGALPVRGVW 815
Query: 188 RSGGAQRLFA 217
R+ GAQ+LF+
Sbjct: 816 RN-GAQKLFS 824
>gb|ESW35216.1| hypothetical protein PHAVU_001G216400g [Phaseolus vulgaris]
Length = 834
Score = 68.6 bits (166), Expect = 8e-10
Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Frame = +2
Query: 17 GGSSKQRKKTSKFNRVRLGDGSAAAL--FDPSRRDAIPEPQENRNADGSSETQPVRGVWR 190
GG +KQRKK SKF RVRLGDG A+AL DP D N DGS PVRGVWR
Sbjct: 771 GGGNKQRKKGSKFLRVRLGDGPASALDQSDPGTTDG-----SEVNKDGSGGGLPVRGVWR 825
Query: 191 SGGAQRLF 214
+GG Q+LF
Sbjct: 826 NGGGQKLF 833
>ref|XP_002878444.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297324282|gb|EFH54703.1| zinc finger family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 811
Score = 67.8 bits (164), Expect = 1e-09
Identities = 35/65 (53%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = +2
Query: 20 GSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGSSETQ----PVRGVW 187
G+ +QRKKTSKF+RVRLGDGS AAL D + + PE + S++ Q PVRGVW
Sbjct: 743 GNKQQRKKTSKFHRVRLGDGSMAALLDLNNSNREPEQESKDGNSNSNQNQTGGLPVRGVW 802
Query: 188 RSGGA 202
R GGA
Sbjct: 803 RKGGA 807
>ref|XP_002468354.1| hypothetical protein SORBIDRAFT_01g044380 [Sorghum bicolor]
gi|241922208|gb|EER95352.1| hypothetical protein
SORBIDRAFT_01g044380 [Sorghum bicolor]
Length = 821
Score = 67.8 bits (164), Expect = 1e-09
Identities = 38/75 (50%), Positives = 46/75 (61%)
Frame = +2
Query: 5 NLADGGSSKQRKKTSKFNRVRLGDGSAAALFDPSRRDAIPEPQENRNADGSSETQPVRGV 184
N GG +KQ KKTSKF R RLGD S A L D SR A PE E R + G PVRG
Sbjct: 748 NSGKGGGNKQPKKTSKFLRARLGDNSLATL-DLSRSSANPERPE-RESQGPEAGLPVRGA 805
Query: 185 WRSGGAQRLFANSSK 229
W++GG Q+LF ++ +
Sbjct: 806 WKNGGGQKLFLSNGR 820