BLASTX nr result
ID: Zingiber24_contig00039844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00039844
(804 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ11640.1| hypothetical protein PRUPE_ppa000214m1g, partial ... 365 1e-98
ref|XP_002275305.1| PREDICTED: lysine-specific demethylase REF6-... 363 4e-98
gb|EXB90590.1| Lysine-specific demethylase REF6 [Morus notabilis] 362 6e-98
gb|EOY22358.1| Relative of early flowering 6, putative isoform 3... 361 1e-97
gb|EOY22357.1| Relative of early flowering 6, putative isoform 2... 361 1e-97
gb|EOY22356.1| Relative of early flowering 6, putative isoform 1... 361 1e-97
ref|XP_004236313.1| PREDICTED: lysine-specific demethylase REF6-... 360 3e-97
ref|XP_004157814.1| PREDICTED: LOW QUALITY PROTEIN: lysine-speci... 358 9e-97
ref|XP_004152585.1| PREDICTED: lysine-specific demethylase REF6-... 358 9e-97
ref|XP_006351452.1| PREDICTED: lysine-specific demethylase REF6-... 358 1e-96
ref|XP_002511265.1| nucleic acid binding protein, putative [Rici... 357 4e-96
ref|XP_006476948.1| PREDICTED: lysine-specific demethylase REF6-... 355 1e-95
ref|XP_006440007.1| hypothetical protein CICLE_v10018473mg [Citr... 355 1e-95
ref|XP_004301036.1| PREDICTED: lysine-specific demethylase REF6-... 352 7e-95
ref|XP_006578679.1| PREDICTED: lysine-specific demethylase REF6-... 347 4e-93
ref|XP_006578680.1| PREDICTED: lysine-specific demethylase REF6-... 346 6e-93
ref|XP_002321665.2| hypothetical protein POPTR_0015s10040g [Popu... 346 6e-93
ref|NP_680116.2| lysine-specific demethylase REF6 [Arabidopsis t... 340 3e-91
ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-... 340 3e-91
ref|XP_006581891.1| PREDICTED: lysine-specific demethylase REF6-... 340 3e-91
>gb|EMJ11640.1| hypothetical protein PRUPE_ppa000214m1g, partial [Prunus persica]
Length = 292
Score = 365 bits (937), Expect = 1e-98
Identities = 179/258 (69%), Positives = 206/258 (79%), Gaps = 6/258 (2%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APE+HP EF DPIAYI KIEKEA+ +GICKIVPP P PKKTA+ANLNRS AA
Sbjct: 20 KTLPVAPEYHPTWAEFQDPIAYIFKIEKEASKYGICKIVPPVPPSPKKTAIANLNRSLAA 79
Query: 228 RC-----PLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERS 392
R P K QP TFTTRQQQIGFCPR+PRPV +PVWQSGE YT QQFE KA+ FE++
Sbjct: 80 RAGPSGAPGTKSQP-TFTTRQQQIGFCPRKPRPVNRPVWQSGEYYTFQQFEAKAKSFEKT 138
Query: 393 YVRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPD 572
Y+R K LSPL++ETL+W+A+ DKPF+VEYANDMPGS FVP+ A S+ D
Sbjct: 139 YLR-----KCNKKGGLSPLDIETLYWKATVDKPFSVEYANDMPGSAFVPVSARKSSTSRD 193
Query: 573 RLP-VNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHS 749
V +GE+AWNMRGVSR+K SLLR MKEEIPGVTSPMVY+AMLFSWFAWHVEDH+LHS
Sbjct: 194 AGDNVTLGETAWNMRGVSRSKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHS 253
Query: 750 LNYLHMGSGKTWYGVPRD 803
LNYLHMG+GKTWYGVPR+
Sbjct: 254 LNYLHMGAGKTWYGVPRE 271
>ref|XP_002275305.1| PREDICTED: lysine-specific demethylase REF6-like [Vitis vinifera]
Length = 1295
Score = 363 bits (932), Expect = 4e-98
Identities = 175/254 (68%), Positives = 204/254 (80%), Gaps = 2/254 (0%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APE+HP EF DPI+YI KIEKEA+ +GICKIVPP P PPKKTA+ANL RS A
Sbjct: 19 KTLPLAPEYHPTLAEFQDPISYIFKIEKEASRYGICKIVPPVPPPPKKTAIANLTRSLAN 78
Query: 228 RCPLPK-KQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSYVRR 404
R K PTFTTRQQQ+GFCPR+PRPV+KPVWQSGE YT Q+FE KAR FE++Y+++
Sbjct: 79 RAASSNPKSAPTFTTRQQQVGFCPRKPRPVKKPVWQSGEYYTFQEFEAKARAFEKNYLKK 138
Query: 405 TVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDR-LP 581
+ S LS LE+ETLFW+AS DKPF+VEYANDMPGS FVP+ + W +
Sbjct: 139 S------SKKPLSALEIETLFWKASVDKPFSVEYANDMPGSAFVPVSSK---KWREAGEA 189
Query: 582 VNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYL 761
V VGE+AWNMRG+SRAK SLLR MKEEIPGVTSPMVYVAM+FSWFAWHVEDH+LHSLNYL
Sbjct: 190 VTVGETAWNMRGISRAKGSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYL 249
Query: 762 HMGSGKTWYGVPRD 803
HMG+GKTWYGVPR+
Sbjct: 250 HMGAGKTWYGVPRE 263
>gb|EXB90590.1| Lysine-specific demethylase REF6 [Morus notabilis]
Length = 1508
Score = 362 bits (930), Expect = 6e-98
Identities = 176/256 (68%), Positives = 202/256 (78%), Gaps = 4/256 (1%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APE+HP EF DPI+YI KIEKEA+ +GICKIVPP P KKT +ANLN+S AA
Sbjct: 20 KTLPQAPEYHPTLAEFQDPISYIFKIEKEASEYGICKIVPPVPPSAKKTVIANLNKSLAA 79
Query: 228 RC----PLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSY 395
R K PPTFTTRQQQIGFCPR+PRPVQ+PVWQSGE YT QQFE KA+ FERS+
Sbjct: 80 RNGGFDASNPKNPPTFTTRQQQIGFCPRKPRPVQRPVWQSGENYTFQQFEAKAKGFERSF 139
Query: 396 VRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDR 575
+R A ALSPLE+ETL+W+A+ DKPF+VEYANDMPGS FVP+ S + S
Sbjct: 140 FKR-----CAKKGALSPLEIETLYWKATVDKPFSVEYANDMPGSAFVPV--SAKRSREAG 192
Query: 576 LPVNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLN 755
+GE+AWNMR VSRAK SLLR MKEEIPGVTSPMVYVAM+FSWFAWHVEDH+LHSLN
Sbjct: 193 ESATLGETAWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLN 252
Query: 756 YLHMGSGKTWYGVPRD 803
YLHMG+GKTWYGVPR+
Sbjct: 253 YLHMGAGKTWYGVPRE 268
>gb|EOY22358.1| Relative of early flowering 6, putative isoform 3 [Theobroma cacao]
Length = 1395
Score = 361 bits (927), Expect = 1e-97
Identities = 181/259 (69%), Positives = 204/259 (78%), Gaps = 7/259 (2%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
+SLP APE+ P EF DPIAYI KIEKEA+ +GICKI+PP P PKKTA+ NLNRS A
Sbjct: 19 KSLPLAPEYRPTLAEFQDPIAYIFKIEKEASQYGICKIIPPVPPAPKKTAIGNLNRSLLA 78
Query: 228 RCPL----PKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSY 395
R K PTFTTRQQQIGFCPR+PRPVQKPVWQSGE YT Q+FE KA+ FER Y
Sbjct: 79 RAAANTSSDSKPAPTFTTRQQQIGFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKNFERGY 138
Query: 396 VRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDR 575
++R SRK + LS LE+ETLFW+A+ DKPF+VEYANDMPGS FVPL +S +SS R
Sbjct: 139 LKR-YSRKGS----LSALEVETLFWKATVDKPFSVEYANDMPGSAFVPL-SSKKSSGGGR 192
Query: 576 LP---VNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELH 746
V VGE+ WNMR VSRAK SLLR MK+EIPGVTSPMVY+AMLFSWFAWHVEDH+LH
Sbjct: 193 EAGEGVTVGETPWNMRAVSRAKGSLLRFMKDEIPGVTSPMVYIAMLFSWFAWHVEDHDLH 252
Query: 747 SLNYLHMGSGKTWYGVPRD 803
SLNYLHMG+GKTWYGVPRD
Sbjct: 253 SLNYLHMGAGKTWYGVPRD 271
>gb|EOY22357.1| Relative of early flowering 6, putative isoform 2 [Theobroma cacao]
Length = 1647
Score = 361 bits (927), Expect = 1e-97
Identities = 181/259 (69%), Positives = 204/259 (78%), Gaps = 7/259 (2%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
+SLP APE+ P EF DPIAYI KIEKEA+ +GICKI+PP P PKKTA+ NLNRS A
Sbjct: 19 KSLPLAPEYRPTLAEFQDPIAYIFKIEKEASQYGICKIIPPVPPAPKKTAIGNLNRSLLA 78
Query: 228 RCPL----PKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSY 395
R K PTFTTRQQQIGFCPR+PRPVQKPVWQSGE YT Q+FE KA+ FER Y
Sbjct: 79 RAAANTSSDSKPAPTFTTRQQQIGFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKNFERGY 138
Query: 396 VRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDR 575
++R SRK + LS LE+ETLFW+A+ DKPF+VEYANDMPGS FVPL +S +SS R
Sbjct: 139 LKR-YSRKGS----LSALEVETLFWKATVDKPFSVEYANDMPGSAFVPL-SSKKSSGGGR 192
Query: 576 LP---VNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELH 746
V VGE+ WNMR VSRAK SLLR MK+EIPGVTSPMVY+AMLFSWFAWHVEDH+LH
Sbjct: 193 EAGEGVTVGETPWNMRAVSRAKGSLLRFMKDEIPGVTSPMVYIAMLFSWFAWHVEDHDLH 252
Query: 747 SLNYLHMGSGKTWYGVPRD 803
SLNYLHMG+GKTWYGVPRD
Sbjct: 253 SLNYLHMGAGKTWYGVPRD 271
>gb|EOY22356.1| Relative of early flowering 6, putative isoform 1 [Theobroma cacao]
Length = 1649
Score = 361 bits (927), Expect = 1e-97
Identities = 181/259 (69%), Positives = 204/259 (78%), Gaps = 7/259 (2%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
+SLP APE+ P EF DPIAYI KIEKEA+ +GICKI+PP P PKKTA+ NLNRS A
Sbjct: 19 KSLPLAPEYRPTLAEFQDPIAYIFKIEKEASQYGICKIIPPVPPAPKKTAIGNLNRSLLA 78
Query: 228 RCPL----PKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSY 395
R K PTFTTRQQQIGFCPR+PRPVQKPVWQSGE YT Q+FE KA+ FER Y
Sbjct: 79 RAAANTSSDSKPAPTFTTRQQQIGFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKNFERGY 138
Query: 396 VRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDR 575
++R SRK + LS LE+ETLFW+A+ DKPF+VEYANDMPGS FVPL +S +SS R
Sbjct: 139 LKR-YSRKGS----LSALEVETLFWKATVDKPFSVEYANDMPGSAFVPL-SSKKSSGGGR 192
Query: 576 LP---VNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELH 746
V VGE+ WNMR VSRAK SLLR MK+EIPGVTSPMVY+AMLFSWFAWHVEDH+LH
Sbjct: 193 EAGEGVTVGETPWNMRAVSRAKGSLLRFMKDEIPGVTSPMVYIAMLFSWFAWHVEDHDLH 252
Query: 747 SLNYLHMGSGKTWYGVPRD 803
SLNYLHMG+GKTWYGVPRD
Sbjct: 253 SLNYLHMGAGKTWYGVPRD 271
>ref|XP_004236313.1| PREDICTED: lysine-specific demethylase REF6-like [Solanum
lycopersicum]
Length = 1252
Score = 360 bits (924), Expect = 3e-97
Identities = 172/252 (68%), Positives = 205/252 (81%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APE+HP +EF DPIAYI KIEKEA+ +GICKIVPP P+PPKKTALANLNRS +A
Sbjct: 15 KTLPVAPEYHPTLEEFQDPIAYIFKIEKEASKYGICKIVPPVPAPPKKTALANLNRSLSA 74
Query: 228 RCPLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSYVRRT 407
R PTFTTRQQQIGFCPR+ RPV+KPVWQSGE YT+QQF+VKA+ FE++Y+R+
Sbjct: 75 RAG---SNGPTFTTRQQQIGFCPRKHRPVKKPVWQSGETYTVQQFQVKAKAFEKNYLRKN 131
Query: 408 VSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDRLPVN 587
R AL+PLE+ETL+W+A+ DKPF+VEYANDMPGS F P AS + +
Sbjct: 132 SKR------ALTPLEVETLYWKATVDKPFSVEYANDMPGSAFAPKKASLAAGGIGEVST- 184
Query: 588 VGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYLHM 767
+ ++ WNMRGVSR+K SLL+ MKEEIPGVTSPMVY+AM+FSWFAWHVEDH+LHSLNYLHM
Sbjct: 185 LADTEWNMRGVSRSKGSLLKFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHM 244
Query: 768 GSGKTWYGVPRD 803
GSGKTWYGVPRD
Sbjct: 245 GSGKTWYGVPRD 256
>ref|XP_004157814.1| PREDICTED: LOW QUALITY PROTEIN: lysine-specific demethylase
REF6-like [Cucumis sativus]
Length = 1576
Score = 358 bits (920), Expect = 9e-97
Identities = 174/257 (67%), Positives = 198/257 (77%), Gaps = 5/257 (1%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APE+HP EF DPI+YI KIEKEA+ FGICKIVPP P PKKT + N N+S AA
Sbjct: 19 KTLPLAPEYHPTLAEFQDPISYIFKIEKEASKFGICKIVPPVPPSPKKTVIVNFNKSLAA 78
Query: 228 RCP-----LPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERS 392
R K PPTFTTRQQQIGFCPR+ RPVQK VWQSGE YT QQFE KA+ FE+S
Sbjct: 79 RAAPCSDSTNSKSPPTFTTRQQQIGFCPRKTRPVQKSVWQSGEYYTFQQFEAKAKNFEKS 138
Query: 393 YVRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPD 572
Y++ K LSPLE+ETL+WRA+ DKPF+VEYANDMPGS FVP+ A +
Sbjct: 139 YLK-----KCTKKGGLSPLEIETLYWRATLDKPFSVEYANDMPGSAFVPVSAKMFREAGE 193
Query: 573 RLPVNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSL 752
+GE+AWNMRGVSRAK SLL+ MKEEIPGVTSPMVYVAM+FSWFAWHVEDH+LHSL
Sbjct: 194 G--TTLGETAWNMRGVSRAKGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSL 251
Query: 753 NYLHMGSGKTWYGVPRD 803
NYLHMG+GKTWYGVPRD
Sbjct: 252 NYLHMGAGKTWYGVPRD 268
>ref|XP_004152585.1| PREDICTED: lysine-specific demethylase REF6-like [Cucumis sativus]
Length = 1576
Score = 358 bits (920), Expect = 9e-97
Identities = 174/257 (67%), Positives = 198/257 (77%), Gaps = 5/257 (1%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APE+HP EF DPI+YI KIEKEA+ FGICKIVPP P PKKT + N N+S AA
Sbjct: 19 KTLPLAPEYHPTLAEFQDPISYIFKIEKEASKFGICKIVPPVPPSPKKTVIVNFNKSLAA 78
Query: 228 RCP-----LPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERS 392
R K PPTFTTRQQQIGFCPR+ RPVQK VWQSGE YT QQFE KA+ FE+S
Sbjct: 79 RAAPCSDSTNSKSPPTFTTRQQQIGFCPRKTRPVQKSVWQSGEYYTFQQFEAKAKNFEKS 138
Query: 393 YVRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPD 572
Y++ K LSPLE+ETL+WRA+ DKPF+VEYANDMPGS FVP+ A +
Sbjct: 139 YLK-----KCTKKGGLSPLEIETLYWRATLDKPFSVEYANDMPGSAFVPVSAKMFREAGE 193
Query: 573 RLPVNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSL 752
+GE+AWNMRGVSRAK SLL+ MKEEIPGVTSPMVYVAM+FSWFAWHVEDH+LHSL
Sbjct: 194 G--TTLGETAWNMRGVSRAKGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSL 251
Query: 753 NYLHMGSGKTWYGVPRD 803
NYLHMG+GKTWYGVPRD
Sbjct: 252 NYLHMGAGKTWYGVPRD 268
>ref|XP_006351452.1| PREDICTED: lysine-specific demethylase REF6-like [Solanum
tuberosum]
Length = 1251
Score = 358 bits (919), Expect = 1e-96
Identities = 171/252 (67%), Positives = 203/252 (80%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APE+HP +EF DPIAYI KIEKEA+ +GICKIVPP P PPKKTALANLNRS +A
Sbjct: 15 KTLPVAPEYHPTLEEFQDPIAYIFKIEKEASKYGICKIVPPVPEPPKKTALANLNRSLSA 74
Query: 228 RCPLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSYVRRT 407
R PTFTTRQQQIGFCPR+ RPV+KPVWQSGE YT+QQF+ KA+ FE++Y+R+
Sbjct: 75 RAG---SNGPTFTTRQQQIGFCPRKHRPVKKPVWQSGETYTVQQFQAKAKAFEKNYLRKN 131
Query: 408 VSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDRLPVN 587
R AL+PLE+ETL+W+A+ DKPF+VEYANDMPGS F P AS + +
Sbjct: 132 SKR------ALTPLEVETLYWKATVDKPFSVEYANDMPGSAFAPKKASLAAGGIGEVST- 184
Query: 588 VGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYLHM 767
+ ++ WNMRGVSR+K SLL+ MKEEIPGVTSPMVY+AM+FSWFAWHVEDH+LHSLNYLHM
Sbjct: 185 LADTEWNMRGVSRSKGSLLKFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHM 244
Query: 768 GSGKTWYGVPRD 803
GSGKTWYGVPRD
Sbjct: 245 GSGKTWYGVPRD 256
>ref|XP_002511265.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223550380|gb|EEF51867.1| nucleic acid binding
protein, putative [Ricinus communis]
Length = 1736
Score = 357 bits (915), Expect = 4e-96
Identities = 173/252 (68%), Positives = 198/252 (78%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APE+HP EF DPIAYI KIEKEA+ +GICKIVPP + PKK A+ANLNRS AA
Sbjct: 25 KNLPLAPEYHPTLAEFQDPIAYIFKIEKEASKYGICKIVPPVLAAPKKAAIANLNRSLAA 84
Query: 228 RCPLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSYVRRT 407
R K PTFTTRQQQIGFCPR+PRPVQKPVWQSGE YT Q+FE KA+ FE+SY +
Sbjct: 85 RSS-SSKSAPTFTTRQQQIGFCPRKPRPVQKPVWQSGENYTFQEFEAKAKSFEKSYFK-- 141
Query: 408 VSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDRLPVN 587
K A SPLE+ETL+W+A+ DKPF+VEYANDMPGS F SG + V
Sbjct: 142 ---KCPKKTAFSPLEVETLYWKATVDKPFSVEYANDMPGSAFSVKKMSGGKEIIEG--VT 196
Query: 588 VGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYLHM 767
VGE+ WNMRGVSRAK SLLR MKEEIPGVTSPMVYVAM+FSWFAWHVEDH+LHSLNYLH+
Sbjct: 197 VGETEWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHL 256
Query: 768 GSGKTWYGVPRD 803
G+GKTWYGVP++
Sbjct: 257 GAGKTWYGVPKE 268
>ref|XP_006476948.1| PREDICTED: lysine-specific demethylase REF6-like [Citrus sinensis]
Length = 1666
Score = 355 bits (911), Expect = 1e-95
Identities = 173/256 (67%), Positives = 199/256 (77%), Gaps = 4/256 (1%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APEFHP EF DPIAYI KIEKEA+ +GICKIVPP P PPKKTA+ LNRS A
Sbjct: 15 KTLPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKIVPPVPPPPKKTAITFLNRSLAQ 74
Query: 228 RCPLP----KKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSY 395
R PTFTTRQQQIGFCPR+PRPVQKPVWQSGE YT Q+FE KA+ FE+SY
Sbjct: 75 RAAATGGATSSSGPTFTTRQQQIGFCPRKPRPVQKPVWQSGEYYTFQEFETKAKNFEKSY 134
Query: 396 VRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDR 575
+++ ++KAA LS LE+E+L+W+AS DKPF+VEYANDMPGS FVP+ +
Sbjct: 135 LKKCGNKKAA----LSALEIESLYWKASVDKPFSVEYANDMPGSAFVPVRKIREAVGEG- 189
Query: 576 LPVNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLN 755
V VGE+ WNMRGVSRAK SLLR MKEEIPGVTSPMVY+AMLFSWFAWH EDH+LHSLN
Sbjct: 190 --VTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLN 247
Query: 756 YLHMGSGKTWYGVPRD 803
YLHMG+ KTWYGVP +
Sbjct: 248 YLHMGASKTWYGVPME 263
>ref|XP_006440007.1| hypothetical protein CICLE_v10018473mg [Citrus clementina]
gi|557542269|gb|ESR53247.1| hypothetical protein
CICLE_v10018473mg [Citrus clementina]
Length = 1634
Score = 355 bits (911), Expect = 1e-95
Identities = 173/256 (67%), Positives = 199/256 (77%), Gaps = 4/256 (1%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APEFHP EF DPIAYI KIEKEA+ +GICKIVPP P PPKKTA+ LNRS A
Sbjct: 15 KTLPVAPEFHPTLAEFQDPIAYIFKIEKEASQYGICKIVPPVPPPPKKTAITFLNRSLAQ 74
Query: 228 RCPLP----KKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSY 395
R PTFTTRQQQIGFCPR+PRPVQKPVWQSGE YT Q+FE KA+ FE+SY
Sbjct: 75 RAAATGGATSSSGPTFTTRQQQIGFCPRKPRPVQKPVWQSGEYYTFQEFETKAKNFEKSY 134
Query: 396 VRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDR 575
+++ ++KAA LS LE+E+L+W+AS DKPF+VEYANDMPGS FVP+ +
Sbjct: 135 LKKCGNKKAA----LSALEIESLYWKASVDKPFSVEYANDMPGSAFVPVRKIREAVGEG- 189
Query: 576 LPVNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLN 755
V VGE+ WNMRGVSRAK SLLR MKEEIPGVTSPMVY+AMLFSWFAWH EDH+LHSLN
Sbjct: 190 --VTVGETPWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLN 247
Query: 756 YLHMGSGKTWYGVPRD 803
YLHMG+ KTWYGVP +
Sbjct: 248 YLHMGASKTWYGVPME 263
>ref|XP_004301036.1| PREDICTED: lysine-specific demethylase REF6-like [Fragaria vesca
subsp. vesca]
Length = 1492
Score = 352 bits (904), Expect = 7e-95
Identities = 173/259 (66%), Positives = 202/259 (77%), Gaps = 7/259 (2%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
R+LP APE+HP EF DPIAYI KIEKEA+ +GICKIVPP P PKKTA+ANLN+S
Sbjct: 16 RALPVAPEYHPTWAEFQDPIAYIFKIEKEASQYGICKIVPPVPPAPKKTAIANLNKSLIL 75
Query: 228 RC-PLPKKQP---PTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSY 395
R P+ K P PTFTTRQQQIGFCPR+ RPVQ+PVWQSGE YT QFE KA+ FE+SY
Sbjct: 76 RNGPVTGKGPKAQPTFTTRQQQIGFCPRKARPVQRPVWQSGEHYTFSQFEAKAKSFEKSY 135
Query: 396 VRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPAS---GRSSW 566
++ K LS L++ETL+W+A+ DKPF+VEYANDMPGS FVPL + G +S
Sbjct: 136 LK-----KQRKKGGLSALDIETLYWKATVDKPFSVEYANDMPGSAFVPLSSKKSGGSTSR 190
Query: 567 PDRLPVNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELH 746
V +GE+AWNMRGVSR++ SLLR MKEEIPGVT PMVYVAM+FSWFAWHVEDH+LH
Sbjct: 191 EAGDGVTLGETAWNMRGVSRSRGSLLRFMKEEIPGVTCPMVYVAMMFSWFAWHVEDHDLH 250
Query: 747 SLNYLHMGSGKTWYGVPRD 803
SLNYLHMG+GKTWYGVPR+
Sbjct: 251 SLNYLHMGAGKTWYGVPRE 269
>ref|XP_006578679.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
Length = 1591
Score = 347 bits (889), Expect = 4e-93
Identities = 164/252 (65%), Positives = 194/252 (76%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
+S+P APE+ P EF DPI YI KIEKEA+ +GICKI+PPFP +KTA+ANLNRS A
Sbjct: 16 KSMPVAPEYRPSAAEFQDPIGYIFKIEKEASKYGICKIIPPFPPSSRKTAIANLNRSLA- 74
Query: 228 RCPLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSYVRRT 407
+ TFTTRQQQIGFCPRRPRPVQ+PVWQSG+RYT +FE KA+ FE++Y++R
Sbjct: 75 ------EAGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDRYTFSEFESKAKSFEKTYLKRH 128
Query: 408 VSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDRLPVN 587
+ + S + L PLE ETLFW+A+ DKPF+VEYANDMPGS F P P +
Sbjct: 129 SKKGSGSGSGLGPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHAGD------PSS 182
Query: 588 VGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYLHM 767
+ ++ WNMR VSRAK SLL+ MKEEIPGVTSPMVYVAMLFSWFAWHVEDH+LHSLNYLHM
Sbjct: 183 LADTPWNMRAVSRAKGSLLQFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHM 242
Query: 768 GSGKTWYGVPRD 803
G+GKTWYGVPRD
Sbjct: 243 GAGKTWYGVPRD 254
>ref|XP_006578680.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
Length = 1572
Score = 346 bits (887), Expect = 6e-93
Identities = 165/252 (65%), Positives = 195/252 (77%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
+S+P APE+ P EF DPI YI KIEKEA+ +GICKI+PPFP +KTA+ANLNRS A
Sbjct: 16 KSMPVAPEYRPSAAEFQDPIGYIFKIEKEASKYGICKIIPPFPPSSRKTAIANLNRSLA- 74
Query: 228 RCPLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSYVRRT 407
+ TFTTRQQQIGFCPRRPRPVQ+PVWQSG+RYT +FE KA+ FE++Y++R
Sbjct: 75 ------EAGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDRYTFSEFESKAKSFEKTYLKRH 128
Query: 408 VSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDRLPVN 587
+ + S + L PLE ETLFW+A+ DKPF+VEYANDMPGS F P R+ P L
Sbjct: 129 SKKGSGSGSGLGPLETETLFWKATLDKPFSVEYANDMPGSAF--SPKCRRTGDPSSL--- 183
Query: 588 VGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYLHM 767
++ WNMR VSRAK SLL+ MKEEIPGVTSPMVYVAMLFSWFAWHVEDH+LHSLNYLHM
Sbjct: 184 -ADTPWNMRAVSRAKGSLLQFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHM 242
Query: 768 GSGKTWYGVPRD 803
G+GKTWYG+PRD
Sbjct: 243 GAGKTWYGIPRD 254
>ref|XP_002321665.2| hypothetical protein POPTR_0015s10040g [Populus trichocarpa]
gi|550322407|gb|EEF05792.2| hypothetical protein
POPTR_0015s10040g [Populus trichocarpa]
Length = 1630
Score = 346 bits (887), Expect = 6e-93
Identities = 166/252 (65%), Positives = 196/252 (77%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
++LP APE+ P EF DPIAYI KIEKEA+ +GICKI+PP KKT L+NLNRS A
Sbjct: 25 KNLPLAPEYRPTLSEFQDPIAYIFKIEKEASQYGICKIIPPVLPSAKKTTLSNLNRSLCA 84
Query: 228 RCPLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSYVRRT 407
R PTFTTRQQQIGFCPR+PRPVQKPVWQSGE YT Q+FE KAR FE++Y+++
Sbjct: 85 RNG--GSSAPTFTTRQQQIGFCPRKPRPVQKPVWQSGETYTFQEFETKARTFEKNYLKKF 142
Query: 408 VSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDRLPVN 587
+ ALSPLE+ETL+W+A+ DKPF+VEYANDMPGS F P G+ ++
Sbjct: 143 FKK-----GALSPLEIETLYWKATLDKPFSVEYANDMPGSAFSPRKKEGQGGVAGE-GMS 196
Query: 588 VGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYLHM 767
VG++ WNMRGVSRAK SLLR MKEEIPGVTSPMVYV M+FSWFAWHVEDH+LHSLNY+HM
Sbjct: 197 VGDTEWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYVGMMFSWFAWHVEDHDLHSLNYMHM 256
Query: 768 GSGKTWYGVPRD 803
G+GKTWYGVPR+
Sbjct: 257 GAGKTWYGVPRE 268
>ref|NP_680116.2| lysine-specific demethylase REF6 [Arabidopsis thaliana]
gi|75337637|sp|Q9STM3.1|REF6_ARATH RecName:
Full=Lysine-specific demethylase REF6; AltName:
Full=Jumonji domain-containing protein 12; AltName:
Full=Lysine-specific histone demethylase REF6; AltName:
Full=Protein RELATIVE OF EARLY FLOWERING 6
gi|4678345|emb|CAB41155.1| putative zinc finger protein
[Arabidopsis thaliana] gi|50513173|gb|AAT77779.1|
relative of early flowering 6 [Arabidopsis thaliana]
gi|332644895|gb|AEE78416.1| lysine-specific demethylase
REF6 [Arabidopsis thaliana]
Length = 1360
Score = 340 bits (873), Expect = 3e-91
Identities = 166/263 (63%), Positives = 199/263 (75%), Gaps = 11/263 (4%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
+SLP APEF P EF DPIAYILKIE+EA+ +GICKI+PP P P KKT+++NLNRS AA
Sbjct: 15 KSLPVAPEFRPTLAEFQDPIAYILKIEEEASRYGICKILPPLPPPSKKTSISNLNRSLAA 74
Query: 228 RCPLPKKQP----------PTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKAR 377
R + PTF TRQQQIGFCPR+ RPVQ+PVWQSGE Y+ +FE KA+
Sbjct: 75 RAAARVRDGGFGACDYDGGPTFATRQQQIGFCPRKQRPVQRPVWQSGEEYSFGEFEFKAK 134
Query: 378 KFERSYVRRTVSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLP-ASG 554
FE++Y++ K + LS LE+ETL+WRA+ DKPF+VEYANDMPGS F+PL A+
Sbjct: 135 NFEKNYLK-----KCGKKSQLSALEIETLYWRATVDKPFSVEYANDMPGSAFIPLSLAAA 189
Query: 555 RSSWPDRLPVNVGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVED 734
R VGE+AWNMR +SRA+ SLL+ MKEEIPGVTSPMVYVAM+FSWFAWHVED
Sbjct: 190 RRRESGGEGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVED 249
Query: 735 HELHSLNYLHMGSGKTWYGVPRD 803
H+LHSLNYLHMG+GKTWYGVP+D
Sbjct: 250 HDLHSLNYLHMGAGKTWYGVPKD 272
>ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
Length = 1565
Score = 340 bits (873), Expect = 3e-91
Identities = 165/252 (65%), Positives = 193/252 (76%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
+S+P APE+ P EF DPI+YI KIEKEA+ +GICKI+PPFP +KTA+ANLNRS A
Sbjct: 16 KSMPVAPEYRPSAAEFQDPISYIFKIEKEASKYGICKIIPPFPPSSRKTAIANLNRSLA- 74
Query: 228 RCPLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSYVRRT 407
+ TFTTRQQQIGFCPRRPRPVQ+PVWQSG+RYT +FE KA+ FE++Y++R
Sbjct: 75 ------ETGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDRYTFTEFESKAKSFEKTYLKRH 128
Query: 408 VSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDRLPVN 587
K AS PLE ETLFW+A+ DKPF+VEYANDMPGS F P P +
Sbjct: 129 A--KKASGLGPGPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRRVGD------PSS 180
Query: 588 VGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYLHM 767
+ ++ WNMR VSRAK SLL+ MKEEIPGVTSPMVYVAMLFSWFAWHVEDH+LHSLNYLHM
Sbjct: 181 LADTQWNMRAVSRAKGSLLQFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHM 240
Query: 768 GSGKTWYGVPRD 803
G+GKTWYGVPRD
Sbjct: 241 GAGKTWYGVPRD 252
>ref|XP_006581891.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
Length = 1586
Score = 340 bits (873), Expect = 3e-91
Identities = 165/252 (65%), Positives = 193/252 (76%)
Frame = +3
Query: 48 RSLPSAPEFHPKPQEFHDPIAYILKIEKEAAPFGICKIVPPFPSPPKKTALANLNRSFAA 227
+S+P APE+ P EF DPI+YI KIEKEA+ +GICKI+PPFP +KTA+ANLNRS A
Sbjct: 16 KSMPVAPEYRPSAAEFQDPISYIFKIEKEASKYGICKIIPPFPPSSRKTAIANLNRSLA- 74
Query: 228 RCPLPKKQPPTFTTRQQQIGFCPRRPRPVQKPVWQSGERYTLQQFEVKARKFERSYVRRT 407
+ TFTTRQQQIGFCPRRPRPVQ+PVWQSG+RYT +FE KA+ FE++Y++R
Sbjct: 75 ------ETGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDRYTFTEFESKAKSFEKTYLKRH 128
Query: 408 VSRKAASAAALSPLEMETLFWRASADKPFTVEYANDMPGSGFVPLPASGRSSWPDRLPVN 587
K AS PLE ETLFW+A+ DKPF+VEYANDMPGS F P P +
Sbjct: 129 A--KKASGLGPGPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRRVGD------PSS 180
Query: 588 VGESAWNMRGVSRAKSSLLRLMKEEIPGVTSPMVYVAMLFSWFAWHVEDHELHSLNYLHM 767
+ ++ WNMR VSRAK SLL+ MKEEIPGVTSPMVYVAMLFSWFAWHVEDH+LHSLNYLHM
Sbjct: 181 LADTQWNMRAVSRAKGSLLQFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHM 240
Query: 768 GSGKTWYGVPRD 803
G+GKTWYGVPRD
Sbjct: 241 GAGKTWYGVPRD 252