BLASTX nr result

ID: Zingiber24_contig00039820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00039820
         (414 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006349037.1| PREDICTED: protein UPSTREAM OF FLC-like isof...    57   3e-06
ref|XP_006349036.1| PREDICTED: protein UPSTREAM OF FLC-like isof...    57   3e-06
ref|XP_006349033.1| PREDICTED: protein UPSTREAM OF FLC-like isof...    57   3e-06
ref|XP_004250983.1| PREDICTED: uncharacterized protein LOC101262...    57   3e-06
ref|XP_006592714.1| PREDICTED: protein UPSTREAM OF FLC-like isof...    55   1e-05
ref|XP_006592713.1| PREDICTED: protein UPSTREAM OF FLC-like isof...    55   1e-05

>ref|XP_006349037.1| PREDICTED: protein UPSTREAM OF FLC-like isoform X5 [Solanum
           tuberosum]
          Length = 435

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = +2

Query: 272 MDARMRRYAPQVSPDRTRVWAEPPPKHHFQAQERQQRGKIPVVYYLC 412
           MD RM++Y  Q+SP+R +VW E  PK+  Q   R   GK+PVVYYLC
Sbjct: 1   MDGRMKKYG-QLSPERAKVWTEKSPKYQQQQPARLSNGKVPVVYYLC 46


>ref|XP_006349036.1| PREDICTED: protein UPSTREAM OF FLC-like isoform X4 [Solanum
           tuberosum]
          Length = 529

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = +2

Query: 272 MDARMRRYAPQVSPDRTRVWAEPPPKHHFQAQERQQRGKIPVVYYLC 412
           MD RM++Y  Q+SP+R +VW E  PK+  Q   R   GK+PVVYYLC
Sbjct: 1   MDGRMKKYG-QLSPERAKVWTEKSPKYQQQQPARLSNGKVPVVYYLC 46


>ref|XP_006349033.1| PREDICTED: protein UPSTREAM OF FLC-like isoform X1 [Solanum
           tuberosum] gi|565364653|ref|XP_006349034.1| PREDICTED:
           protein UPSTREAM OF FLC-like isoform X2 [Solanum
           tuberosum] gi|565364655|ref|XP_006349035.1| PREDICTED:
           protein UPSTREAM OF FLC-like isoform X3 [Solanum
           tuberosum]
          Length = 549

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = +2

Query: 272 MDARMRRYAPQVSPDRTRVWAEPPPKHHFQAQERQQRGKIPVVYYLC 412
           MD RM++Y  Q+SP+R +VW E  PK+  Q   R   GK+PVVYYLC
Sbjct: 1   MDGRMKKYG-QLSPERAKVWTEKSPKYQQQQPARLSNGKVPVVYYLC 46


>ref|XP_004250983.1| PREDICTED: uncharacterized protein LOC101262588 [Solanum
           lycopersicum]
          Length = 525

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/47 (53%), Positives = 32/47 (68%)
 Frame = +2

Query: 272 MDARMRRYAPQVSPDRTRVWAEPPPKHHFQAQERQQRGKIPVVYYLC 412
           MD RM++Y  Q+SP+R +VW E  PK+  Q   R   GK+PVVYYLC
Sbjct: 1   MDGRMKKYG-QLSPERAKVWTEKSPKYQQQQPARLSNGKVPVVYYLC 46


>ref|XP_006592714.1| PREDICTED: protein UPSTREAM OF FLC-like isoform X2 [Glycine max]
          Length = 519

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/47 (55%), Positives = 33/47 (70%)
 Frame = +2

Query: 272 MDARMRRYAPQVSPDRTRVWAEPPPKHHFQAQERQQRGKIPVVYYLC 412
           M+ARMR+Y  QVSP+R +VW E PPK+H       Q  K+PV+YYLC
Sbjct: 1   MEARMRKYR-QVSPERAKVWTEKPPKYH-------QNRKVPVLYYLC 39


>ref|XP_006592713.1| PREDICTED: protein UPSTREAM OF FLC-like isoform X1 [Glycine max]
          Length = 533

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/47 (55%), Positives = 33/47 (70%)
 Frame = +2

Query: 272 MDARMRRYAPQVSPDRTRVWAEPPPKHHFQAQERQQRGKIPVVYYLC 412
           M+ARMR+Y  QVSP+R +VW E PPK+H       Q  K+PV+YYLC
Sbjct: 1   MEARMRKYR-QVSPERAKVWTEKPPKYH-------QNRKVPVLYYLC 39


Top