BLASTX nr result
ID: Zingiber24_contig00039817
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00039817
(243 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002320514.2| hypothetical protein POPTR_0014s16390g [Popu... 98 1e-18
gb|EMJ17863.1| hypothetical protein PRUPE_ppb017187mg [Prunus pe... 96 6e-18
ref|XP_006843235.1| hypothetical protein AMTR_s00080p00074320 [A... 95 8e-18
ref|XP_004303560.1| PREDICTED: pentatricopeptide repeat-containi... 91 1e-16
gb|EOX93483.1| Tetratricopeptide repeat (TPR)-like superfamily p... 88 1e-15
ref|XP_006362997.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_004243565.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006469492.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
ref|XP_006447772.1| hypothetical protein CICLE_v10018243mg [Citr... 86 4e-15
ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
ref|XP_002530223.1| pentatricopeptide repeat-containing protein,... 86 5e-15
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi... 86 7e-15
ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [S... 85 1e-14
emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera] 84 1e-14
ref|XP_006285690.1| hypothetical protein CARUB_v10007160mg [Caps... 83 4e-14
ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containi... 83 4e-14
ref|XP_002869597.1| pentatricopeptide repeat-containing protein ... 83 4e-14
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar... 83 4e-14
ref|XP_006655158.1| PREDICTED: putative pentatricopeptide repeat... 82 6e-14
ref|XP_006413152.1| hypothetical protein EUTSA_v10024897mg [Eutr... 82 7e-14
>ref|XP_002320514.2| hypothetical protein POPTR_0014s16390g [Populus trichocarpa]
gi|550324329|gb|EEE98829.2| hypothetical protein
POPTR_0014s16390g [Populus trichocarpa]
Length = 506
Score = 97.8 bits (242), Expect = 1e-18
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K E+A+ +L ME++G +P VVS+NTLI HC KG+ +A+KLKN M GL P VT+N
Sbjct: 222 KLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFN 281
Query: 183 TLIHGFCKEGKMREAYRCF 239
+LIHGFCKEGK+ EA R F
Sbjct: 282 SLIHGFCKEGKLHEANRFF 300
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/75 (34%), Positives = 44/75 (58%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K +A M+ + +P V++NTLI+ + + G + +A K+ M+ G++ +TYN
Sbjct: 292 KLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYN 351
Query: 183 TLIHGFCKEGKMREA 227
LI G CKEGK ++A
Sbjct: 352 ALILGLCKEGKTKKA 366
>gb|EMJ17863.1| hypothetical protein PRUPE_ppb017187mg [Prunus persica]
Length = 533
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/79 (56%), Positives = 58/79 (73%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K E A+ +LE+M+++G SPTVVS+NTLI HC KG+ A K KN M GL P+ VT+N
Sbjct: 253 KFENAVEVLEKMDSMGFSPTVVSYNTLIAGHCDKGLLSSALKFKNLMAKNGLHPSVVTFN 312
Query: 183 TLIHGFCKEGKMREAYRCF 239
+LI GFCKEGK++EA R F
Sbjct: 313 SLIDGFCKEGKLKEANRIF 331
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = +3
Query: 48 GCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYNTLIHGFCKEGKMREA 227
G P+VV+FN+LID CK+G + A+++ N M + + P VTYNTLI G+ +EG
Sbjct: 303 GLHPSVVTFNSLIDGFCKEGKLKEANRIFNEMKAVNVAPDTVTYNTLIKGYSQEGNSEMG 362
Query: 228 YRCFQ 242
R F+
Sbjct: 363 NRLFE 367
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/75 (37%), Positives = 46/75 (61%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K ++A + M+A+ +P V++NTLI + ++G +E+ ++L M + T VTYN
Sbjct: 323 KLKEANRIFNEMKAVNVAPDTVTYNTLIKGYSQEGNSEMGNRLFEEMSRNQVNATIVTYN 382
Query: 183 TLIHGFCKEGKMREA 227
LI G CKEGK ++A
Sbjct: 383 ALILGLCKEGKTKKA 397
>ref|XP_006843235.1| hypothetical protein AMTR_s00080p00074320 [Amborella trichopoda]
gi|548845519|gb|ERN04910.1| hypothetical protein
AMTR_s00080p00074320 [Amborella trichopoda]
Length = 489
Score = 95.1 bits (235), Expect = 8e-18
Identities = 43/77 (55%), Positives = 55/77 (71%)
Frame = +3
Query: 9 EQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYNTL 188
E+A+ + +E +GC P VVSFNTLID HCK G+ A KLK++M + GL P VTYNTL
Sbjct: 210 EKAVEVFREIEKVGCRPNVVSFNTLIDGHCKMGLLNAAMKLKSSMPNNGLYPNVVTYNTL 269
Query: 189 IHGFCKEGKMREAYRCF 239
IHG CK+GK+ EA + F
Sbjct: 270 IHGLCKKGKLHEANKLF 286
>ref|XP_004303560.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 539
Score = 91.3 bits (225), Expect = 1e-16
Identities = 43/75 (57%), Positives = 55/75 (73%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K E A+ +LE+ME++G S TVVS+NTLI HC KG+ A K KN M+ GL P+ VT+N
Sbjct: 253 KLENAVEVLEKMESMGFSATVVSYNTLIAGHCNKGLLSSAVKFKNLMVKNGLHPSVVTFN 312
Query: 183 TLIHGFCKEGKMREA 227
TLI GFCK+GK+ EA
Sbjct: 313 TLIDGFCKQGKLPEA 327
>gb|EOX93483.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 532
Score = 87.8 bits (216), Expect = 1e-15
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K E+A+ +L ME++G SPT+ S+NTLI H KG+ LA KL+N+M G+ P VTYN
Sbjct: 249 KLEKAVEVLREMESVGFSPTIASYNTLIRGHADKGLMSLAMKLRNSMGKDGVLPNVVTYN 308
Query: 183 TLIHGFCKEGKMREAYRCF 239
TLI+GFCK+ K+ EA + F
Sbjct: 309 TLINGFCKDDKLHEANKVF 327
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/75 (38%), Positives = 48/75 (64%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K +A + M+A+ +PTVV++NTLI+ + + G +E+ ++L M G++ +TYN
Sbjct: 319 KLHEANKVFIEMKALKVAPTVVTYNTLINGYSQAGNSEMGNRLFEEMSKNGVKADILTYN 378
Query: 183 TLIHGFCKEGKMREA 227
LI G CKEGK ++A
Sbjct: 379 ALILGLCKEGKTKKA 393
>ref|XP_006362997.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Solanum tuberosum]
Length = 530
Score = 87.4 bits (215), Expect = 2e-15
Identities = 42/79 (53%), Positives = 52/79 (65%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K E+A+ +L ME I PT VS+NTLI HC + I +A KLK TM G++P VTYN
Sbjct: 252 KLEKAVEVLREMENISLKPTAVSYNTLIAGHCNRDILSVALKLKTTMEMNGVQPVNVTYN 311
Query: 183 TLIHGFCKEGKMREAYRCF 239
TLIHG CK GK+ EA + F
Sbjct: 312 TLIHGLCKVGKLHEANKLF 330
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/75 (42%), Positives = 48/75 (64%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K +A L M+ G +P VV++NTLI+A+ + G +E+ S+L M + GL+ +TYN
Sbjct: 322 KLHEANKLFSEMKRTGVAPNVVTYNTLINAYSQVGNSEMGSRLFEEMANNGLKADILTYN 381
Query: 183 TLIHGFCKEGKMREA 227
LI G CKEGK ++A
Sbjct: 382 ALIMGLCKEGKTKKA 396
>ref|XP_004243565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Solanum lycopersicum]
Length = 530
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/79 (51%), Positives = 52/79 (65%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K E+A+ +L ME I PT VS+NTLI HC + + +A KLK TM G++P VTYN
Sbjct: 252 KLEKAVEVLREMENISLKPTAVSYNTLIAGHCNRDLLSVAMKLKTTMEMNGIQPVNVTYN 311
Query: 183 TLIHGFCKEGKMREAYRCF 239
TLIHG CK GK+ EA + F
Sbjct: 312 TLIHGLCKVGKLHEANKLF 330
Score = 61.2 bits (147), Expect = 1e-07
Identities = 31/75 (41%), Positives = 47/75 (62%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K +A L M+ G +P VV++NTLI+A+ + G +E+ S+L M + GL+ +TYN
Sbjct: 322 KLHEANKLFSEMKRTGVAPNVVTYNTLINAYSQVGNSEMGSRLFEEMANNGLKADILTYN 381
Query: 183 TLIHGFCKEGKMREA 227
LI G CKE K ++A
Sbjct: 382 ALIMGLCKEMKTKKA 396
>ref|XP_006469492.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568830409|ref|XP_006469493.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform X2 [Citrus sinensis]
gi|568830411|ref|XP_006469494.1| PREDICTED:
pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform X3 [Citrus sinensis]
Length = 565
Score = 86.7 bits (213), Expect = 3e-15
Identities = 38/77 (49%), Positives = 54/77 (70%)
Frame = +3
Query: 9 EQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYNTL 188
E+A+ + + ME++G P+V ++NTLI HC KG+ LA K KN M G++P +T+NTL
Sbjct: 280 ERAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
Query: 189 IHGFCKEGKMREAYRCF 239
I GFCK+GK+ EA R F
Sbjct: 340 IFGFCKKGKLHEANRIF 356
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K +A + M+A SP VV++NTLI+ + + G +E+ + L M+ G++ +TYN
Sbjct: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
Query: 183 TLIHGFCKEGKMREA 227
LI G CKEGK ++A
Sbjct: 408 ALILGLCKEGKTKKA 422
>ref|XP_006447772.1| hypothetical protein CICLE_v10018243mg [Citrus clementina]
gi|557550383|gb|ESR61012.1| hypothetical protein
CICLE_v10018243mg [Citrus clementina]
Length = 565
Score = 86.3 bits (212), Expect = 4e-15
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = +3
Query: 9 EQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYNTL 188
E A+ + + ME++G P+V ++NTLI HC KG+ LA K KN M G++P +T+NTL
Sbjct: 280 ESAVEVFKNMESMGFIPSVTTYNTLISGHCNKGLLSLAMKFKNLMEKNGIQPNVITFNTL 339
Query: 189 IHGFCKEGKMREAYRCF 239
I GFCK+GK+ EA R F
Sbjct: 340 IFGFCKKGKLHEANRIF 356
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K +A + M+A SP VV++NTLI+ + + G +E+ + L M+ G++ +TYN
Sbjct: 348 KLHEANRIFSEMKATNVSPNVVTYNTLINGYGQVGNSEMGASLYEEMLRNGIKVDILTYN 407
Query: 183 TLIHGFCKEGKMREA 227
LI G CKEGK ++A
Sbjct: 408 ALILGLCKEGKTKKA 422
>ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/72 (55%), Positives = 53/72 (73%)
Frame = +3
Query: 24 LLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYNTLIHGFC 203
+LE+M +G SP VVSFNTLI +C KG+ LA K+K+ M+ G++P VT+NTLI+GFC
Sbjct: 247 MLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFC 306
Query: 204 KEGKMREAYRCF 239
KE K+ EA R F
Sbjct: 307 KERKLHEANRVF 318
>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 517
Score = 85.9 bits (211), Expect = 5e-15
Identities = 40/79 (50%), Positives = 56/79 (70%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K E+A+ + E ME++G SP S+NTLI +C+KG+ A KLKN+M +KG+ VT+N
Sbjct: 231 KLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFN 290
Query: 183 TLIHGFCKEGKMREAYRCF 239
+LI GFCKEGK+ EA + F
Sbjct: 291 SLIDGFCKEGKLHEASKVF 309
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/75 (34%), Positives = 44/75 (58%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K +A + M+ + +P +++NTLI+ H + G +E+ +L M G++ +TYN
Sbjct: 301 KLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYN 360
Query: 183 TLIHGFCKEGKMREA 227
LI G CKEGK ++A
Sbjct: 361 ALILGLCKEGKTKKA 375
>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 85.5 bits (210), Expect = 7e-15
Identities = 40/79 (50%), Positives = 55/79 (69%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K E+AI + +RME +G SPT+ S+NTLI +C KG+ KLK M G+RP +VT+N
Sbjct: 329 KLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFN 388
Query: 183 TLIHGFCKEGKMREAYRCF 239
TLI+GFC+ GK+ EA + F
Sbjct: 389 TLINGFCRGGKLHEANKIF 407
>ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein
SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 84.7 bits (208), Expect = 1e-14
Identities = 36/73 (49%), Positives = 53/73 (72%)
Frame = +3
Query: 24 LLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYNTLIHGFC 203
L++ ME +G P ++S+N LI HC G T+ ASKL + M+S GL+P E TYNTL+HG+C
Sbjct: 506 LIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYC 565
Query: 204 KEGKMREAYRCFQ 242
++G++ +AY FQ
Sbjct: 566 RDGRIDDAYSVFQ 578
Score = 61.2 bits (147), Expect = 1e-07
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Frame = +3
Query: 24 LLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLR---PTEVTYNTLIH 194
LL RM +GC+P VVS+NTL+ C + E A +L + M +R P V+YNT+I+
Sbjct: 153 LLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVIN 212
Query: 195 GFCKEGKMREAYRCF 239
GF EG++ +AY F
Sbjct: 213 GFFTEGQVDKAYNLF 227
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/75 (36%), Positives = 45/75 (60%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K+++A LL+ M ++G P ++NTL+ +C+ G + A + M+S G+ P VTYN
Sbjct: 534 KTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYN 593
Query: 183 TLIHGFCKEGKMREA 227
T++HG K + EA
Sbjct: 594 TILHGLFKTRRFSEA 608
>emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 84.3 bits (207), Expect = 1e-14
Identities = 39/79 (49%), Positives = 55/79 (69%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K E+AI + ++ME +G SPT+ S+NTLI +C KG+ KLK M G+RP +VT+N
Sbjct: 196 KLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFN 255
Query: 183 TLIHGFCKEGKMREAYRCF 239
TLI+GFC+ GK+ EA + F
Sbjct: 256 TLINGFCRGGKLHEANKIF 274
>ref|XP_006285690.1| hypothetical protein CARUB_v10007160mg [Capsella rubella]
gi|482554395|gb|EOA18588.1| hypothetical protein
CARUB_v10007160mg [Capsella rubella]
Length = 513
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K ++ I LL+ ME +G T VS+NTLI HC+ G+ LA KLKN M GL+P VT+N
Sbjct: 245 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCENGLLSLALKLKNMMGRNGLQPNVVTFN 304
Query: 183 TLIHGFCKEGKMREAYRCF 239
TLIHGFC+ K++EA + F
Sbjct: 305 TLIHGFCRTVKLQEASKVF 323
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/75 (34%), Positives = 45/75 (60%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K ++A + M+A+ +P V++NTLI+ + ++G E+A + M+ G+ +TYN
Sbjct: 315 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIPRDILTYN 374
Query: 183 TLIHGFCKEGKMREA 227
LI G CK+ K R+A
Sbjct: 375 ALILGLCKQAKTRKA 389
>ref|XP_004295517.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Fragaria vesca subsp. vesca]
Length = 647
Score = 82.8 bits (203), Expect = 4e-14
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = +3
Query: 9 EQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYNTL 188
++A+ LL+ M+ GCSP+ +FN LIDA CKKG A+KL + M KG P EVTYNTL
Sbjct: 227 DEAVFLLDEMQIEGCSPSPAAFNVLIDAVCKKGDLGRAAKLVDNMFLKGCVPNEVTYNTL 286
Query: 189 IHGFCKEGKMREA 227
IHG C +GK+ +A
Sbjct: 287 IHGLCLQGKLEKA 299
>ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315433|gb|EFH45856.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 538
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K ++ I LL+ ME +G T VS+NTLI HC+KG+ A KLKN M GL+P VT+N
Sbjct: 253 KLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFN 312
Query: 183 TLIHGFCKEGKMREAYRCF 239
TLIHGFC+ K++EA + F
Sbjct: 313 TLIHGFCRAVKLQEASKVF 331
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/75 (36%), Positives = 46/75 (61%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K ++A + M+A+ P V++NTLI+ + ++G E+A + M+ G++ +TYN
Sbjct: 323 KLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 183 TLIHGFCKEGKMREA 227
TLI G CK+ K R+A
Sbjct: 383 TLILGLCKQAKTRKA 397
>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
thaliana] gi|7269520|emb|CAB79523.1| putative protein
[Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 82.8 bits (203), Expect = 4e-14
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K ++ I LL+ ME +G T VS+NTLI HC+KG+ A KLKN M GL+P VT+N
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 183 TLIHGFCKEGKMREAYRCF 239
TLIHGFC+ K++EA + F
Sbjct: 313 TLIHGFCRAMKLQEASKVF 331
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/75 (34%), Positives = 46/75 (61%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K ++A + M+A+ +P V++NTLI+ + ++G E+A + M+ G++ +TYN
Sbjct: 323 KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYN 382
Query: 183 TLIHGFCKEGKMREA 227
LI G CK+ K R+A
Sbjct: 383 ALIFGLCKQAKTRKA 397
>ref|XP_006655158.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Oryza brachyantha]
Length = 946
Score = 82.4 bits (202), Expect = 6e-14
Identities = 36/77 (46%), Positives = 53/77 (68%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K +A L ++++ G SP V+++NTLID HCK+G T A KLK M+ +G++PT +TY+
Sbjct: 792 KLSRAFTLFNKLQSKGISPNVITYNTLIDGHCKEGKTTEAFKLKQKMVEEGIQPTVITYS 851
Query: 183 TLIHGFCKEGKMREAYR 233
LIHG C +G M EA +
Sbjct: 852 ILIHGLCSQGYMDEAIK 868
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/78 (42%), Positives = 48/78 (61%)
Frame = +3
Query: 9 EQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYNTL 188
++A L + M + G +P ++++N+LI CK G A L N + SKG+ P +TYNTL
Sbjct: 759 DEAFTLRDAMLSAGLTPNIITYNSLIYGLCKSGKLSRAFTLFNKLQSKGISPNVITYNTL 818
Query: 189 IHGFCKEGKMREAYRCFQ 242
I G CKEGK EA++ Q
Sbjct: 819 IDGHCKEGKTTEAFKLKQ 836
Score = 61.2 bits (147), Expect = 1e-07
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +3
Query: 12 QAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYNTLI 191
QA+ +E M +G +V+++ L+D +C G TE A ++ ++ KGL P VTY L+
Sbjct: 243 QAVEFVEEMGRMGLEVNLVAYHALMDCYCGMGHTEDARRILQSLQRKGLSPNVVTYTLLV 302
Query: 192 HGFCKEGKMREA 227
G+CK G+M EA
Sbjct: 303 KGYCKNGRMEEA 314
>ref|XP_006413152.1| hypothetical protein EUTSA_v10024897mg [Eutrema salsugineum]
gi|557114322|gb|ESQ54605.1| hypothetical protein
EUTSA_v10024897mg [Eutrema salsugineum]
Length = 528
Score = 82.0 bits (201), Expect = 7e-14
Identities = 39/79 (49%), Positives = 54/79 (68%)
Frame = +3
Query: 3 KSEQAICLLERMEAIGCSPTVVSFNTLIDAHCKKGITELASKLKNTMISKGLRPTEVTYN 182
K ++ + LL+ ME +G T VS+NTLI HC+KG+ A +LKN M GL+P VT+N
Sbjct: 260 KLDKGVELLQDMERLGFQATEVSYNTLIAGHCEKGLLSSAWRLKNMMGKNGLQPNVVTFN 319
Query: 183 TLIHGFCKEGKMREAYRCF 239
TLIHGFC+ K++EA + F
Sbjct: 320 TLIHGFCRSVKLQEASKVF 338