BLASTX nr result

ID: Zingiber24_contig00039796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00039796
         (304 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324568.1| hypothetical protein POPTR_0018s12170g [Popu...    58   1e-06

>ref|XP_002324568.1| hypothetical protein POPTR_0018s12170g [Populus trichocarpa]
           gi|222866002|gb|EEF03133.1| hypothetical protein
           POPTR_0018s12170g [Populus trichocarpa]
          Length = 115

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = -2

Query: 258 GFLRRIFEGCISASFSGIDRRPYHRDCKCALHXXXXXXXXXXXSA--VSYPVXXXXXXXX 85
           GF R +++GC+S+   GIDRRPYHR+C+CALH               VSYP+        
Sbjct: 8   GFFRHVYDGCLSSGDMGIDRRPYHRNCRCALHKSKENCPHALPRCKNVSYPIKRSWSEGS 67

Query: 84  XXXLATSSLSSHC 46
              +  +S SS C
Sbjct: 68  LALMIANSSSSSC 80


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