BLASTX nr result

ID: Zingiber24_contig00039777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00039777
         (422 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001147271.1| TTN10 [Zea mays] gi|195609332|gb|ACG26496.1|...    80   4e-13
ref|XP_006659261.1| PREDICTED: probable DNA replication complex ...    79   5e-13
gb|ADE76054.1| unknown [Picea sitchensis]                              79   5e-13
ref|NP_001061429.2| Os08g0274700 [Oryza sativa Japonica Group] g...    79   5e-13
gb|EAZ42139.1| hypothetical protein OsJ_26699 [Oryza sativa Japo...    79   5e-13
dbj|BAC99469.1| unknown protein [Oryza sativa Japonica Group]          79   8e-13
gb|AFW65031.1| TTN10 isoform 1 [Zea mays] gi|413925100|gb|AFW650...    79   8e-13
gb|AFW65028.1| hypothetical protein ZEAMMB73_149616 [Zea mays] g...    79   8e-13
gb|ACN35084.1| unknown [Zea mays]                                      79   8e-13
ref|XP_004972819.1| PREDICTED: probable DNA replication complex ...    78   1e-12
ref|NP_001152311.1| TTN10 [Zea mays] gi|195623610|gb|ACG33635.1|...    77   2e-12
ref|XP_003573642.1| PREDICTED: probable DNA replication complex ...    77   3e-12
ref|XP_003558400.1| PREDICTED: probable DNA replication complex ...    77   3e-12
dbj|BAK07935.1| predicted protein [Hordeum vulgare subsp. vulgare]     76   4e-12
gb|AFK34889.1| unknown [Medicago truncatula]                           75   7e-12
ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [M...    75   7e-12
gb|EMT31126.1| hypothetical protein F775_28508 [Aegilops tauschii]     75   9e-12
gb|EMS63600.1| hypothetical protein TRIUR3_26614 [Triticum urartu]     75   9e-12
ref|XP_002271201.1| PREDICTED: probable DNA replication complex ...    74   2e-11
ref|XP_006857266.1| hypothetical protein AMTR_s00199p00036120 [A...    74   2e-11

>ref|NP_001147271.1| TTN10 [Zea mays] gi|195609332|gb|ACG26496.1| TTN10 [Zea mays]
           gi|238006936|gb|ACR34503.1| unknown [Zea mays]
           gi|413916860|gb|AFW56792.1| TTN10 [Zea mays]
          Length = 194

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 40/52 (76%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
 Frame = +3

Query: 270 EDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLRQAVS 422
           ED+ I V+FQV ANGVGLLDPG+ENN VEKGAKV+LPFWLAH  L L QAVS
Sbjct: 13  EDEPISVVFQVTANGVGLLDPGAENNCVEKGAKVDLPFWLAHGLLSLEQAVS 64


>ref|XP_006659261.1| PREDICTED: probable DNA replication complex GINS protein PSF3-like
           [Oryza brachyantha]
          Length = 194

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLR 410
           MP          E++ I V+FQV ANGVGLLDPG+E NSVEKGAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEEEPISVVFQVSANGVGLLDPGAERNSVEKGAKVDLPFWLAHGLLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>gb|ADE76054.1| unknown [Picea sitchensis]
          Length = 191

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 36/51 (70%), Positives = 44/51 (86%)
 Frame = +3

Query: 270 EDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHELQLRQAVS 422
           E++ + V+F+VGANG GLLDPGSENN+VE GAKVELPFWLA +L  R+AVS
Sbjct: 13  EEEPVSVVFRVGANGAGLLDPGSENNNVEAGAKVELPFWLAQDLCTREAVS 63


>ref|NP_001061429.2| Os08g0274700 [Oryza sativa Japonica Group]
           gi|255678312|dbj|BAF23343.2| Os08g0274700, partial
           [Oryza sativa Japonica Group]
          Length = 203

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLR 410
           MP          E++ I V+FQV ANGVGLLDPG+E NSVEKGAKV+LPFWLAH  L L 
Sbjct: 10  MPGYYDIDDILMEEEPISVVFQVSANGVGLLDPGAERNSVEKGAKVDLPFWLAHGLLSLE 69

Query: 411 QAVS 422
           QAVS
Sbjct: 70  QAVS 73


>gb|EAZ42139.1| hypothetical protein OsJ_26699 [Oryza sativa Japonica Group]
           gi|215767849|dbj|BAH00078.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 194

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLR 410
           MP          E++ I V+FQV ANGVGLLDPG+E NSVEKGAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEEEPISVVFQVSANGVGLLDPGAERNSVEKGAKVDLPFWLAHGLLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>dbj|BAC99469.1| unknown protein [Oryza sativa Japonica Group]
          Length = 183

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 39/52 (75%), Positives = 44/52 (84%), Gaps = 1/52 (1%)
 Frame = +3

Query: 270 EDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLRQAVS 422
           E++ I V+FQV ANGVGLLDPG+E NSVEKGAKV+LPFWLAH  L L QAVS
Sbjct: 2   EEEPISVVFQVSANGVGLLDPGAERNSVEKGAKVDLPFWLAHGLLSLEQAVS 53


>gb|AFW65031.1| TTN10 isoform 1 [Zea mays] gi|413925100|gb|AFW65032.1| TTN10
           isoform 2 [Zea mays] gi|413925101|gb|AFW65033.1| TTN10
           isoform 3 [Zea mays]
          Length = 189

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLR 410
           MP          ED+ I V+FQV ANGVGLLDPG+E+N VEKGAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEDEPISVVFQVTANGVGLLDPGAESNCVEKGAKVDLPFWLAHGLLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>gb|AFW65028.1| hypothetical protein ZEAMMB73_149616 [Zea mays]
           gi|413925097|gb|AFW65029.1| hypothetical protein
           ZEAMMB73_149616 [Zea mays] gi|413925098|gb|AFW65030.1|
           hypothetical protein ZEAMMB73_149616 [Zea mays]
          Length = 74

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLR 410
           MP          ED+ I V+FQV ANGVGLLDPG+E+N VEKGAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEDEPISVVFQVTANGVGLLDPGAESNCVEKGAKVDLPFWLAHGLLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>gb|ACN35084.1| unknown [Zea mays]
          Length = 189

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLR 410
           MP          ED+ I V+FQV ANGVGLLDPG+E+N VEKGAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEDEPISVVFQVTANGVGLLDPGAESNCVEKGAKVDLPFWLAHGLLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>ref|XP_004972819.1| PREDICTED: probable DNA replication complex GINS protein PSF3-like
           [Setaria italica]
          Length = 194

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 41/64 (64%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLR 410
           MP          ED+ I V+FQV ANGVGLLDPG+E+N VEKGAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEDEPISVVFQVTANGVGLLDPGAESNFVEKGAKVDLPFWLAHGLLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>ref|NP_001152311.1| TTN10 [Zea mays] gi|195623610|gb|ACG33635.1| TTN10 [Zea mays]
           gi|195654979|gb|ACG46957.1| TTN10 [Zea mays]
          Length = 189

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 40/64 (62%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHE-LQLR 410
           MP          ED+ I V+FQV ANGVGLLDPG+E+N V+KGAKV+LPFWLAH  L L 
Sbjct: 1   MPGYYDIDDILMEDEPISVVFQVTANGVGLLDPGAESNCVDKGAKVDLPFWLAHGLLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>ref|XP_003573642.1| PREDICTED: probable DNA replication complex GINS protein PSF3-like
           [Brachypodium distachyon]
          Length = 194

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAH-ELQLR 410
           MP          E++ I V+FQV ANGVGLLDPG+E N+V+KGAKV+LPFWLAH  L L 
Sbjct: 1   MPCYYDVDDILMEEESISVVFQVTANGVGLLDPGAERNTVDKGAKVDLPFWLAHGMLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>ref|XP_003558400.1| PREDICTED: probable DNA replication complex GINS protein PSF3-like
           [Brachypodium distachyon]
          Length = 195

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAH-ELQLR 410
           MP          E++ I V+FQV ANGVGLLDPG+E N+V+KGAKV+LPFWLAH  L L 
Sbjct: 1   MPCYYDVDDILMEEESISVVFQVTANGVGLLDPGAERNTVDKGAKVDLPFWLAHGMLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>dbj|BAK07935.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 194

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +3

Query: 234 MPXXXXXXXXXXEDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAH-ELQLR 410
           MP          E++ I V+FQV ANGVG+LDPG+E N+VEKGAKV+LPFWLAH  L L 
Sbjct: 1   MPCYYDVNDILMEEELISVVFQVTANGVGMLDPGAERNTVEKGAKVDLPFWLAHGMLSLE 60

Query: 411 QAVS 422
           QAVS
Sbjct: 61  QAVS 64


>gb|AFK34889.1| unknown [Medicago truncatula]
          Length = 186

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = +3

Query: 270 EDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHELQLRQAVS 422
           E++ + VIFQ  A+GVG++DP SE + +E G+KVELPFWLAHELQLRQAVS
Sbjct: 13  EEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQAVS 63


>ref|XP_003600887.1| DNA replication complex GINS protein PSF3 [Medicago truncatula]
           gi|355489935|gb|AES71138.1| DNA replication complex GINS
           protein PSF3 [Medicago truncatula]
          Length = 186

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 34/51 (66%), Positives = 43/51 (84%)
 Frame = +3

Query: 270 EDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHELQLRQAVS 422
           E++ + VIFQ  A+GVG++DP SE + +E G+KVELPFWLAHELQLRQAVS
Sbjct: 13  EEEIVSVIFQKAASGVGIIDPSSETDFIEAGSKVELPFWLAHELQLRQAVS 63


>gb|EMT31126.1| hypothetical protein F775_28508 [Aegilops tauschii]
          Length = 241

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/50 (76%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
 Frame = +3

Query: 276 QHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAH-ELQLRQAVS 422
           Q I V+FQV ANGVG+LDPG+E NSVEKGAKV+LPFWLAH  L L QAVS
Sbjct: 62  QLISVVFQVTANGVGMLDPGAERNSVEKGAKVDLPFWLAHGMLSLEQAVS 111


>gb|EMS63600.1| hypothetical protein TRIUR3_26614 [Triticum urartu]
          Length = 229

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/48 (79%), Positives = 41/48 (85%), Gaps = 1/48 (2%)
 Frame = +3

Query: 282 IQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAH-ELQLRQAVS 422
           I V+FQV ANGVGLLDPG+E NSVEKGAKV+LPFWLAH  L L QAVS
Sbjct: 24  ISVVFQVTANGVGLLDPGAERNSVEKGAKVDLPFWLAHGMLSLEQAVS 71


>ref|XP_002271201.1| PREDICTED: probable DNA replication complex GINS protein PSF3
           [Vitis vinifera] gi|147828134|emb|CAN64086.1|
           hypothetical protein VITISV_006937 [Vitis vinifera]
           gi|297736610|emb|CBI25481.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 33/51 (64%), Positives = 42/51 (82%)
 Frame = +3

Query: 270 EDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHELQLRQAVS 422
           E++ +  +FQ  ANGVG+LDP +E NSVE+G+KVELPFWLAHEL  RQAV+
Sbjct: 13  EEELVSAVFQKAANGVGILDPSAETNSVEQGSKVELPFWLAHELLQRQAVT 63


>ref|XP_006857266.1| hypothetical protein AMTR_s00199p00036120 [Amborella trichopoda]
           gi|548861358|gb|ERN18733.1| hypothetical protein
           AMTR_s00199p00036120 [Amborella trichopoda]
          Length = 194

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = +3

Query: 270 EDQHIQVIFQVGANGVGLLDPGSENNSVEKGAKVELPFWLAHELQLRQAVS 422
           +++ + V+FQV ANGVGLLDPGSE NSVE+GAK+++ FWLA EL LR+A S
Sbjct: 13  DEELVSVVFQVTANGVGLLDPGSETNSVEQGAKIDVTFWLAQELYLREAAS 63


Top