BLASTX nr result
ID: Zingiber24_contig00039612
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00039612
(292 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004952277.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 75 9e-12
ref|XP_003572684.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 74 2e-11
gb|AFW65750.1| putative seven in absentia domain family protein ... 74 3e-11
ref|XP_002453731.1| hypothetical protein SORBIDRAFT_04g011560 [S... 73 3e-11
gb|ACJ84699.1| unknown [Medicago truncatula] gi|388518031|gb|AFK... 73 3e-11
ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula... 73 3e-11
ref|XP_006441088.1| hypothetical protein CICLE_v10020998mg [Citr... 72 8e-11
ref|NP_001146171.1| uncharacterized protein LOC100279741 [Zea ma... 71 1e-10
ref|XP_006493314.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 70 2e-10
ref|XP_004498515.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 70 4e-10
ref|XP_004164773.1| PREDICTED: E3 ubiquitin-protein ligase SINAT... 69 7e-10
ref|XP_004146222.1| PREDICTED: uncharacterized protein LOC101215... 69 7e-10
gb|ADN33741.1| ubiquitin ligase [Cucumis melo subsp. melo] 69 7e-10
gb|EPS72485.1| hypothetical protein M569_02273 [Genlisea aurea] 69 9e-10
ref|XP_003602252.1| Ubiquitin ligase SINAT3 [Medicago truncatula... 68 1e-09
gb|ACJ84732.1| unknown [Medicago truncatula] 68 1e-09
ref|XP_003602251.1| Ubiquitin ligase SINAT3 [Medicago truncatula... 68 1e-09
emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus] 68 1e-09
gb|ACN25429.1| unknown [Zea mays] gi|413936325|gb|AFW70876.1| pu... 67 2e-09
gb|ABR13699.1| SINA3 [Zea mays] 67 2e-09
>ref|XP_004952277.1| PREDICTED: E3 ubiquitin-protein ligase SINAT4-like [Setaria
italica]
Length = 346
Score = 75.1 bits (183), Expect = 9e-12
Identities = 46/100 (46%), Positives = 53/100 (53%), Gaps = 31/100 (31%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVARV-----PLSFLK------------------------- 175
MELDSIEC+S SDG+ DDD+ A V P FLK
Sbjct: 1 MELDSIECVSYSDGMEDDDDAAAVTSAQLPRPFLKSASSAGSAAAAAVNVVVVSDRAGGP 60
Query: 176 -PHGDGSGVQATQVISPVSRVHQLLECPVCGDSMYPPIHQ 292
P G G+G VISP + VH+LLECPVC +SMYPPIHQ
Sbjct: 61 VPGGTGAG---PLVISPATGVHELLECPVCTNSMYPPIHQ 97
>ref|XP_003572684.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5-like [Brachypodium
distachyon]
Length = 340
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/91 (43%), Positives = 51/91 (56%), Gaps = 22/91 (24%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDE-VARVPLSFLKPH---------------------GDGSGV 199
ME+DSIEC+S SDG+ DDD+ V+ +P LK G GV
Sbjct: 1 MEMDSIECVSFSDGLDDDDDAVSHLPRPLLKSSSAAGSAAAAAVNVVVVSGGGSGGAGGV 60
Query: 200 QATQVISPVSRVHQLLECPVCGDSMYPPIHQ 292
A +++P VH+LLECPVC +SMYPPIHQ
Sbjct: 61 VAGPLVTPAMGVHELLECPVCTNSMYPPIHQ 91
>gb|AFW65750.1| putative seven in absentia domain family protein [Zea mays]
Length = 347
Score = 73.6 bits (179), Expect = 3e-11
Identities = 45/98 (45%), Positives = 52/98 (53%), Gaps = 29/98 (29%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVARV-----PLSFLKPHG------------------DGSG 196
MELDSIEC+S SDG+ DDD+ A V P FLK D +G
Sbjct: 1 MELDSIECVSYSDGMEDDDDTAAVTSSQLPRPFLKSSSTAGAAAAAAAAVNVVVVSDRAG 60
Query: 197 VQATQ------VISPVSRVHQLLECPVCGDSMYPPIHQ 292
T VISP + VH+LLECPVC +SMYPPIHQ
Sbjct: 61 AAGTVAGAGPLVISPATGVHELLECPVCTNSMYPPIHQ 98
>ref|XP_002453731.1| hypothetical protein SORBIDRAFT_04g011560 [Sorghum bicolor]
gi|241933562|gb|EES06707.1| hypothetical protein
SORBIDRAFT_04g011560 [Sorghum bicolor]
Length = 344
Score = 73.2 bits (178), Expect = 3e-11
Identities = 43/95 (45%), Positives = 49/95 (51%), Gaps = 26/95 (27%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVARV-----PLSFLKPHGDGSGVQATQ------------- 211
MELDSIEC+S SDG+ DDD+ A V P FLK A
Sbjct: 1 MELDSIECVSYSDGMEDDDDTAAVTSSQLPRPFLKSSSTAGTAAAAVNVVVVSDRTGAAG 60
Query: 212 --------VISPVSRVHQLLECPVCGDSMYPPIHQ 292
VISP + VH+LLECPVC +SMYPPIHQ
Sbjct: 61 PVAGAGPLVISPATGVHELLECPVCTNSMYPPIHQ 95
>gb|ACJ84699.1| unknown [Medicago truncatula] gi|388518031|gb|AFK47077.1| unknown
[Medicago truncatula]
Length = 335
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVARV------------PLSFLKPHGDGS---GVQATQVIS 220
M+LDSIEC+S SDG+ +D+ R+ S LKP G+ GV + I+
Sbjct: 1 MDLDSIECVSSSDGMDEDEIQHRILHPHHQQHHHHSEFSSLKPRSGGNNNHGVIGSTAIA 60
Query: 221 PVSRVHQLLECPVCGDSMYPPIHQ 292
P + VH+LLECPVC +SMYPPIHQ
Sbjct: 61 PATSVHELLECPVCTNSMYPPIHQ 84
>ref|XP_003588519.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
gi|158516792|gb|ABW70159.1| SINA1 [Medicago truncatula]
gi|355477567|gb|AES58770.1| Ubiquitin ligase SINAT3
[Medicago truncatula]
Length = 333
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 15/84 (17%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVARV------------PLSFLKPHGDGS---GVQATQVIS 220
M+LDSIEC+S SDG+ +D+ R+ S LKP G+ GV + I+
Sbjct: 1 MDLDSIECVSSSDGMDEDEIQHRILHPHHQQHHHHSEFSSLKPRSGGNNNHGVIGSTAIA 60
Query: 221 PVSRVHQLLECPVCGDSMYPPIHQ 292
P + VH+LLECPVC +SMYPPIHQ
Sbjct: 61 PATSVHELLECPVCTNSMYPPIHQ 84
>ref|XP_006441088.1| hypothetical protein CICLE_v10020998mg [Citrus clementina]
gi|557543350|gb|ESR54328.1| hypothetical protein
CICLE_v10020998mg [Citrus clementina]
Length = 339
Score = 72.0 bits (175), Expect = 8e-11
Identities = 39/90 (43%), Positives = 52/90 (57%), Gaps = 21/90 (23%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVAR---VPL------SFLKPHGDG------------SGVQ 202
MELDSIEC+S DG+ D+DE++ PL + KPH + +G+
Sbjct: 1 MELDSIECVSSMDGLMDEDEISHHHHPPLLHHHQFASSKPHNNAINNNNAANTNGINGIV 60
Query: 203 ATQVISPVSRVHQLLECPVCGDSMYPPIHQ 292
I+P + VH+LLECPVC +SMYPPIHQ
Sbjct: 61 GPTAIAPATSVHELLECPVCTNSMYPPIHQ 90
>ref|NP_001146171.1| uncharacterized protein LOC100279741 [Zea mays]
gi|219886055|gb|ACL53402.1| unknown [Zea mays]
Length = 347
Score = 71.2 bits (173), Expect = 1e-10
Identities = 44/98 (44%), Positives = 51/98 (52%), Gaps = 29/98 (29%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVARV-----PLSFLKPHG------------------DGSG 196
MELD IEC+S SDG+ DDD+ A V P FLK D +G
Sbjct: 1 MELDIIECVSYSDGMEDDDDTAAVTSSQLPRPFLKSSSTAGAAAAAAAAVNVVVVSDRAG 60
Query: 197 VQATQ------VISPVSRVHQLLECPVCGDSMYPPIHQ 292
T VISP + VH+LLECPVC +SMYPPIHQ
Sbjct: 61 AAGTVAGAGPLVISPATGVHELLECPVCTNSMYPPIHQ 98
>ref|XP_006493314.1| PREDICTED: E3 ubiquitin-protein ligase SINAT4-like [Citrus
sinensis]
Length = 339
Score = 70.5 bits (171), Expect = 2e-10
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 21/90 (23%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVAR---VPL------SFLKPHGDG------------SGVQ 202
MELDSIEC+S DG+ ++DE++ PL + KPH + +G+
Sbjct: 1 MELDSIECVSSMDGLMEEDEISHHHHPPLLHHHQFASSKPHNNAINNNNAANTNGINGIV 60
Query: 203 ATQVISPVSRVHQLLECPVCGDSMYPPIHQ 292
I+P + VH+LLECPVC +SMYPPIHQ
Sbjct: 61 GPTAIAPATSVHELLECPVCTNSMYPPIHQ 90
>ref|XP_004498515.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Cicer
arietinum]
Length = 331
Score = 69.7 bits (169), Expect = 4e-10
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 13/82 (15%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVARV-----------PLSFLKPHGDGSG--VQATQVISPV 226
MELDSIEC+S SDG+ +D+ R+ S +KP + V + I+P
Sbjct: 1 MELDSIECVSSSDGMDEDEIQHRILHPHPHHNHHSEFSSMKPRNGNNNHVVIGSTTIAPA 60
Query: 227 SRVHQLLECPVCGDSMYPPIHQ 292
+ VH+LLECPVC +SMYPPIHQ
Sbjct: 61 TSVHELLECPVCTNSMYPPIHQ 82
>ref|XP_004164773.1| PREDICTED: E3 ubiquitin-protein ligase SINAT4-like [Cucumis
sativus]
Length = 331
Score = 68.9 bits (167), Expect = 7e-10
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 15/84 (17%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVA-------------RVPLSFLKPHG--DGSGVQATQVIS 220
M+LDSIEC+S SDG+ D+DE+ LS KP + SG+ +
Sbjct: 1 MDLDSIECVSSSDGL-DEDEIHLHHTLHPYSLSHHHPELSATKPRNGSNNSGIAVPTATA 59
Query: 221 PVSRVHQLLECPVCGDSMYPPIHQ 292
P + VH+LLECPVC +SMYPPIHQ
Sbjct: 60 PATSVHELLECPVCTNSMYPPIHQ 83
>ref|XP_004146222.1| PREDICTED: uncharacterized protein LOC101215696 [Cucumis sativus]
Length = 648
Score = 68.9 bits (167), Expect = 7e-10
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 15/84 (17%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVA-------------RVPLSFLKPHG--DGSGVQATQVIS 220
M+LDSIEC+S SDG+ D+DE+ LS KP + SG+ +
Sbjct: 1 MDLDSIECVSSSDGL-DEDEIHLHHTLHPYSLSHHHPELSATKPRNGSNNSGIAVPTATA 59
Query: 221 PVSRVHQLLECPVCGDSMYPPIHQ 292
P + VH+LLECPVC +SMYPPIHQ
Sbjct: 60 PATSVHELLECPVCTNSMYPPIHQ 83
>gb|ADN33741.1| ubiquitin ligase [Cucumis melo subsp. melo]
Length = 648
Score = 68.9 bits (167), Expect = 7e-10
Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 15/84 (17%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVA-------------RVPLSFLKPHG--DGSGVQATQVIS 220
M+LDSIEC+S SDG+ D+DE+ LS KP + SG+ +
Sbjct: 1 MDLDSIECVSSSDGL-DEDEIHLHHTLHPYSLSHHHPELSATKPRNGSNNSGIAVPTATA 59
Query: 221 PVSRVHQLLECPVCGDSMYPPIHQ 292
P + VH+LLECPVC +SMYPPIHQ
Sbjct: 60 PATSVHELLECPVCTNSMYPPIHQ 83
>gb|EPS72485.1| hypothetical protein M569_02273 [Genlisea aurea]
Length = 316
Score = 68.6 bits (166), Expect = 9e-10
Identities = 32/65 (49%), Positives = 41/65 (63%)
Frame = +2
Query: 98 SIECISVSDGITDDDEVARVPLSFLKPHGDGSGVQATQVISPVSRVHQLLECPVCGDSMY 277
SIEC+S DGI ++DE+ R P S + I+P + VH+LLECPVC +SMY
Sbjct: 4 SIECVSSVDGIDEEDEIQRSSAHHPFPQFSSSKGSSNGAINPATSVHELLECPVCTNSMY 63
Query: 278 PPIHQ 292
PPIHQ
Sbjct: 64 PPIHQ 68
>ref|XP_003602252.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
gi|355491300|gb|AES72503.1| Ubiquitin ligase SINAT3
[Medicago truncatula]
Length = 216
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVA-----RVPLSFLKPHGDGSGVQ---ATQVISPVSRVHQ 241
MELDSIEC+S SDG+ D+DE+ S K G+ + I+P + VH+
Sbjct: 1 MELDSIECVSSSDGM-DEDEIHSHHHHHSEFSSTKARNGGANINNILGPTAIAPATSVHE 59
Query: 242 LLECPVCGDSMYPPIHQ 292
LLECPVC +SMYPPIHQ
Sbjct: 60 LLECPVCTNSMYPPIHQ 76
>gb|ACJ84732.1| unknown [Medicago truncatula]
Length = 138
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVA-----RVPLSFLKPHGDGSGVQ---ATQVISPVSRVHQ 241
MELDSIEC+S SDG+ D+DE+ S K G+ + I+P + VH+
Sbjct: 1 MELDSIECVSSSDGM-DEDEIHSHHHHHSEFSSTKARNGGANINNILGPTAIAPATSVHE 59
Query: 242 LLECPVCGDSMYPPIHQ 292
LLECPVC +SMYPPIHQ
Sbjct: 60 LLECPVCTNSMYPPIHQ 76
>ref|XP_003602251.1| Ubiquitin ligase SINAT3 [Medicago truncatula]
gi|158516798|gb|ABW70162.1| SINA4 [Medicago truncatula]
gi|355491299|gb|AES72502.1| Ubiquitin ligase SINAT3
[Medicago truncatula]
Length = 324
Score = 68.2 bits (165), Expect = 1e-09
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 8/77 (10%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVA-----RVPLSFLKPHGDGSGVQ---ATQVISPVSRVHQ 241
MELDSIEC+S SDG+ D+DE+ S K G+ + I+P + VH+
Sbjct: 1 MELDSIECVSSSDGM-DEDEIHSHHHHHSEFSSTKARNGGANINNILGPTAIAPATSVHE 59
Query: 242 LLECPVCGDSMYPPIHQ 292
LLECPVC +SMYPPIHQ
Sbjct: 60 LLECPVCTNSMYPPIHQ 76
>emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]
Length = 324
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/75 (48%), Positives = 47/75 (62%), Gaps = 6/75 (8%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVARVPLSFLKP---HGDGSGVQATQ---VISPVSRVHQLL 247
M+LDSIEC+S SDG+ +D+ A F +G G+ A I+P + VH+LL
Sbjct: 1 MDLDSIECVSSSDGMDEDEIHAHHHSEFSSTKARNGGGNNNNAAMGPTAITPATSVHELL 60
Query: 248 ECPVCGDSMYPPIHQ 292
ECPVC +SMYPPIHQ
Sbjct: 61 ECPVCTNSMYPPIHQ 75
>gb|ACN25429.1| unknown [Zea mays] gi|413936325|gb|AFW70876.1| putative seven in
absentia domain family protein [Zea mays]
Length = 341
Score = 67.4 bits (163), Expect = 2e-09
Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 24/93 (25%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVA----RVPLSFLKPHGDGSGVQATQV------------- 214
MELDSIEC+S SD + DDD A ++P FLK +G A V
Sbjct: 1 MELDSIECMSYSDSMGDDDTDAVTSSQLPRPFLKSSST-AGTAAVNVVVVSDRVGAAGPV 59
Query: 215 -------ISPVSRVHQLLECPVCGDSMYPPIHQ 292
ISP + VH+LLECPVC +SMYPPIHQ
Sbjct: 60 AGAGSLVISPATGVHELLECPVCTNSMYPPIHQ 92
>gb|ABR13699.1| SINA3 [Zea mays]
Length = 341
Score = 67.4 bits (163), Expect = 2e-09
Identities = 42/93 (45%), Positives = 50/93 (53%), Gaps = 24/93 (25%)
Frame = +2
Query: 86 MELDSIECISVSDGITDDDEVA----RVPLSFLKPHGDGSGVQATQV------------- 214
MELDSIEC+S SD + DDD A ++P FLK +G A V
Sbjct: 1 MELDSIECMSYSDSMGDDDTDAVTSSQLPRPFLKSSST-AGTAAVNVVVVSDRVGAAGPV 59
Query: 215 -------ISPVSRVHQLLECPVCGDSMYPPIHQ 292
ISP + VH+LLECPVC +SMYPPIHQ
Sbjct: 60 AGAGSLVISPATGVHELLECPVCTNSMYPPIHQ 92