BLASTX nr result

ID: Zingiber24_contig00039603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00039603
         (297 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]    57   2e-06
ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis ...    56   4e-06
ref|XP_006378820.1| hypothetical protein POPTR_0010s24650g [Popu...    55   1e-05
ref|XP_006378819.1| hypothetical protein POPTR_0010s24650g [Popu...    55   1e-05

>emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]
          Length = 996

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/91 (35%), Positives = 45/91 (49%)
 Frame = -3

Query: 274  LTDAQCDRAFDILLQFDRLGNPFPPPSGDTRSFQLMRGRFADXXXXXXXXXXXXXXXXXX 95
            LT +QC++AFD+ LQFD L NPFP P  D+ +F+ MR  F+                   
Sbjct: 782  LTQSQCBQAFDVFLQFDSLDNPFPCP--DSHNFRDMRRCFSQLKEQLDGHIRKSRSKIRL 839

Query: 94   XXXXXXASGACLIFSTVSLAVTGVFLATHAL 2
                   S  C I + V +A++ V +ATH L
Sbjct: 840  ICRATAGSAFCFIGTAVGVAISAVAIATHTL 870


>ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis vinifera]
           gi|297745643|emb|CBI40808.3| unnamed protein product
           [Vitis vinifera]
          Length = 376

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/91 (35%), Positives = 45/91 (49%)
 Frame = -3

Query: 274 LTDAQCDRAFDILLQFDRLGNPFPPPSGDTRSFQLMRGRFADXXXXXXXXXXXXXXXXXX 95
           LT +QC++AFD+ LQFD L NPFP P  D+ +F+ MR  F+                   
Sbjct: 162 LTQSQCNQAFDVFLQFDSLDNPFPCP--DSHNFRDMRRCFSQLKEQLDGHIRKSRSKIRL 219

Query: 94  XXXXXXASGACLIFSTVSLAVTGVFLATHAL 2
                  S  C I + V +A++ V +ATH L
Sbjct: 220 ICRATAGSAFCFIGTAVGVAISAVAIATHTL 250


>ref|XP_006378820.1| hypothetical protein POPTR_0010s24650g [Populus trichocarpa]
           gi|550330534|gb|ERP56617.1| hypothetical protein
           POPTR_0010s24650g [Populus trichocarpa]
          Length = 386

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/90 (34%), Positives = 46/90 (51%)
 Frame = -3

Query: 274 LTDAQCDRAFDILLQFDRLGNPFPPPSGDTRSFQLMRGRFADXXXXXXXXXXXXXXXXXX 95
           L+ +QCD AFD+ LQFDR+GNPFP P  ++ +F  M+  F+                   
Sbjct: 170 LSQSQCDCAFDVFLQFDRVGNPFPCP--ESHNFNEMQQCFSQLKQQLERRIRKSRSRIHL 227

Query: 94  XXXXXXASGACLIFSTVSLAVTGVFLATHA 5
                  S  C+I S V++ V+ V +A+HA
Sbjct: 228 VRRATFGSALCVIGSVVAVVVSAVGIASHA 257


>ref|XP_006378819.1| hypothetical protein POPTR_0010s24650g [Populus trichocarpa]
           gi|550330533|gb|ERP56616.1| hypothetical protein
           POPTR_0010s24650g [Populus trichocarpa]
          Length = 317

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/90 (34%), Positives = 46/90 (51%)
 Frame = -3

Query: 274 LTDAQCDRAFDILLQFDRLGNPFPPPSGDTRSFQLMRGRFADXXXXXXXXXXXXXXXXXX 95
           L+ +QCD AFD+ LQFDR+GNPFP P  ++ +F  M+  F+                   
Sbjct: 101 LSQSQCDCAFDVFLQFDRVGNPFPCP--ESHNFNEMQQCFSQLKQQLERRIRKSRSRIHL 158

Query: 94  XXXXXXASGACLIFSTVSLAVTGVFLATHA 5
                  S  C+I S V++ V+ V +A+HA
Sbjct: 159 VRRATFGSALCVIGSVVAVVVSAVGIASHA 188


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