BLASTX nr result

ID: Zingiber24_contig00039569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00039569
         (335 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004952919.1| PREDICTED: uncharacterized protein LOC101785...    58   1e-06
gb|AFW72059.1| hypothetical protein ZEAMMB73_612720 [Zea mays]         57   2e-06
ref|XP_003575245.1| PREDICTED: uncharacterized protein LOC100845...    57   3e-06

>ref|XP_004952919.1| PREDICTED: uncharacterized protein LOC101785283 [Setaria italica]
          Length = 127

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
 Frame = -1

Query: 335 RLTVVGEGIDSVALTVVLRKKMGPVELLSVGDERKDDKIRQPXXXXXXXSAVGTENKSTW 156
           ++ VVGEG+DS+ LT  LRKK+GP +L+ VG+++K+ K           +A        W
Sbjct: 43  QVVVVGEGVDSIELTSTLRKKVGPAQLVQVGEDKKEVK---------PPAAAAPAPYYPW 93

Query: 155 LTPPVSYNYAYQAPVQSYY-HPYPYEVRSADQENCSIM 45
                 Y  A   PV   Y HPY Y  ++ ++ +CSIM
Sbjct: 94  ----YGYPPAPSQPVSYVYEHPYGYGCQTREESSCSIM 127


>gb|AFW72059.1| hypothetical protein ZEAMMB73_612720 [Zea mays]
          Length = 123

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/97 (37%), Positives = 49/97 (50%)
 Frame = -1

Query: 335 RLTVVGEGIDSVALTVVLRKKMGPVELLSVGDERKDDKIRQPXXXXXXXSAVGTENKSTW 156
           ++ VVG+G+DS+ LT  LRKK+GP  LL VG+ +KDDK   P                 +
Sbjct: 42  KVVVVGDGVDSIKLTGALRKKVGPAHLLQVGEAKKDDKKPPPAVV------------PAY 89

Query: 155 LTPPVSYNYAYQAPVQSYYHPYPYEVRSADQENCSIM 45
             PP   N  Y  P  + Y  Y Y+ +  D  +CSIM
Sbjct: 90  YPPPHPVNVVYDHP--AGYPWYGYQAQH-DTTSCSIM 123


>ref|XP_003575245.1| PREDICTED: uncharacterized protein LOC100845716 [Brachypodium
           distachyon]
          Length = 139

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 36/105 (34%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
 Frame = -1

Query: 335 RLTVVGEGIDSVALTVVLRKKMGPVELLSVGDERKDDKIRQPXXXXXXXSAVGTENKSTW 156
           ++ VVGEG+DS+ LT  LRKK+GP E++ VG+ +K++K            A    N   +
Sbjct: 44  QVVVVGEGVDSINLTSALRKKVGPAEIVQVGEAKKEEK--------KSADAAAAINYPGY 95

Query: 155 LTPP--------VSYNYAYQAPVQSYYHPYPYEVRSADQENCSIM 45
              P        + Y   Y A V  Y H YP      +++NCSIM
Sbjct: 96  CYYPYHYPPQTALVYEQHYPAAVAGYGHGYPL-YAEPERDNCSIM 139


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