BLASTX nr result
ID: Zingiber24_contig00039523
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Zingiber24_contig00039523 (434 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006651887.1| PREDICTED: uncharacterized protein LOC102713... 45 6e-08 ref|XP_006384473.1| hypothetical protein POPTR_0004s15390g [Popu... 39 3e-06 ref|XP_002330267.1| predicted protein [Populus trichocarpa] 39 3e-06 >ref|XP_006651887.1| PREDICTED: uncharacterized protein LOC102713815, partial [Oryza brachyantha] Length = 222 Score = 44.7 bits (104), Expect(3) = 6e-08 Identities = 21/32 (65%), Positives = 26/32 (81%) Frame = -3 Query: 297 SDRDSFYSDGIQLSP*DSRLSLYSGSAQIGVF 202 S RD+F+S G+QLSP DSRLSL SG A++ VF Sbjct: 31 SGRDAFFSGGVQLSPCDSRLSLASGGAKLAVF 62 Score = 35.4 bits (80), Expect(3) = 6e-08 Identities = 14/18 (77%), Positives = 16/18 (88%) Frame = -1 Query: 353 PCADSEVQRWDGFTFGIA 300 PCAD+ VQR DGFTFG+A Sbjct: 12 PCADATVQRGDGFTFGVA 29 Score = 21.6 bits (44), Expect(3) = 6e-08 Identities = 10/12 (83%), Positives = 10/12 (83%) Frame = -2 Query: 205 VPEISLLTTNTS 170 V EISLLT NTS Sbjct: 66 VDEISLLTVNTS 77 >ref|XP_006384473.1| hypothetical protein POPTR_0004s15390g [Populus trichocarpa] gi|550341091|gb|ERP62270.1| hypothetical protein POPTR_0004s15390g [Populus trichocarpa] Length = 224 Score = 38.5 bits (88), Expect(3) = 3e-06 Identities = 20/32 (62%), Positives = 26/32 (81%) Frame = -3 Query: 297 SDRDSFYSDGIQLSP*DSRLSLYSGSAQIGVF 202 SD+DSF+S+ +QLSP DSRL+L S AQ+ VF Sbjct: 35 SDKDSFFSNQVQLSPCDSRLAL-SKKAQLAVF 65 Score = 33.5 bits (75), Expect(3) = 3e-06 Identities = 12/18 (66%), Positives = 17/18 (94%) Frame = -1 Query: 353 PCADSEVQRWDGFTFGIA 300 PC+D+ VQ++DGFTFG+A Sbjct: 16 PCSDAMVQKFDGFTFGLA 33 Score = 23.9 bits (50), Expect(3) = 3e-06 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -2 Query: 205 VPEISLLTTNTSNNPPACQAP 143 V EISLLT N+S + P P Sbjct: 69 VDEISLLTINSSPSDPGAPGP 89 >ref|XP_002330267.1| predicted protein [Populus trichocarpa] Length = 223 Score = 38.5 bits (88), Expect(3) = 3e-06 Identities = 20/32 (62%), Positives = 26/32 (81%) Frame = -3 Query: 297 SDRDSFYSDGIQLSP*DSRLSLYSGSAQIGVF 202 SD+DSF+S+ +QLSP DSRL+L S AQ+ VF Sbjct: 34 SDKDSFFSNQVQLSPCDSRLAL-SKKAQLAVF 64 Score = 33.5 bits (75), Expect(3) = 3e-06 Identities = 12/18 (66%), Positives = 17/18 (94%) Frame = -1 Query: 353 PCADSEVQRWDGFTFGIA 300 PC+D+ VQ++DGFTFG+A Sbjct: 15 PCSDAMVQKFDGFTFGLA 32 Score = 23.9 bits (50), Expect(3) = 3e-06 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = -2 Query: 205 VPEISLLTTNTSNNPPACQAP 143 V EISLLT N+S + P P Sbjct: 68 VDEISLLTINSSPSDPGAPGP 88