BLASTX nr result

ID: Zingiber24_contig00039523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00039523
         (434 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006651887.1| PREDICTED: uncharacterized protein LOC102713...    45   6e-08
ref|XP_006384473.1| hypothetical protein POPTR_0004s15390g [Popu...    39   3e-06
ref|XP_002330267.1| predicted protein [Populus trichocarpa]            39   3e-06

>ref|XP_006651887.1| PREDICTED: uncharacterized protein LOC102713815, partial [Oryza
           brachyantha]
          Length = 222

 Score = 44.7 bits (104), Expect(3) = 6e-08
 Identities = 21/32 (65%), Positives = 26/32 (81%)
 Frame = -3

Query: 297 SDRDSFYSDGIQLSP*DSRLSLYSGSAQIGVF 202
           S RD+F+S G+QLSP DSRLSL SG A++ VF
Sbjct: 31  SGRDAFFSGGVQLSPCDSRLSLASGGAKLAVF 62



 Score = 35.4 bits (80), Expect(3) = 6e-08
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = -1

Query: 353 PCADSEVQRWDGFTFGIA 300
           PCAD+ VQR DGFTFG+A
Sbjct: 12  PCADATVQRGDGFTFGVA 29



 Score = 21.6 bits (44), Expect(3) = 6e-08
 Identities = 10/12 (83%), Positives = 10/12 (83%)
 Frame = -2

Query: 205 VPEISLLTTNTS 170
           V EISLLT NTS
Sbjct: 66  VDEISLLTVNTS 77


>ref|XP_006384473.1| hypothetical protein POPTR_0004s15390g [Populus trichocarpa]
           gi|550341091|gb|ERP62270.1| hypothetical protein
           POPTR_0004s15390g [Populus trichocarpa]
          Length = 224

 Score = 38.5 bits (88), Expect(3) = 3e-06
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -3

Query: 297 SDRDSFYSDGIQLSP*DSRLSLYSGSAQIGVF 202
           SD+DSF+S+ +QLSP DSRL+L S  AQ+ VF
Sbjct: 35  SDKDSFFSNQVQLSPCDSRLAL-SKKAQLAVF 65



 Score = 33.5 bits (75), Expect(3) = 3e-06
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = -1

Query: 353 PCADSEVQRWDGFTFGIA 300
           PC+D+ VQ++DGFTFG+A
Sbjct: 16  PCSDAMVQKFDGFTFGLA 33



 Score = 23.9 bits (50), Expect(3) = 3e-06
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 205 VPEISLLTTNTSNNPPACQAP 143
           V EISLLT N+S + P    P
Sbjct: 69  VDEISLLTINSSPSDPGAPGP 89


>ref|XP_002330267.1| predicted protein [Populus trichocarpa]
          Length = 223

 Score = 38.5 bits (88), Expect(3) = 3e-06
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -3

Query: 297 SDRDSFYSDGIQLSP*DSRLSLYSGSAQIGVF 202
           SD+DSF+S+ +QLSP DSRL+L S  AQ+ VF
Sbjct: 34  SDKDSFFSNQVQLSPCDSRLAL-SKKAQLAVF 64



 Score = 33.5 bits (75), Expect(3) = 3e-06
 Identities = 12/18 (66%), Positives = 17/18 (94%)
 Frame = -1

Query: 353 PCADSEVQRWDGFTFGIA 300
           PC+D+ VQ++DGFTFG+A
Sbjct: 15  PCSDAMVQKFDGFTFGLA 32



 Score = 23.9 bits (50), Expect(3) = 3e-06
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -2

Query: 205 VPEISLLTTNTSNNPPACQAP 143
           V EISLLT N+S + P    P
Sbjct: 68  VDEISLLTINSSPSDPGAPGP 88


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