BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00039379
         (691 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]    249   8e-64
gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japo...   247   2e-63
gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indi...   245   8e-63
ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [S...   242   9e-62
ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-li...   239   8e-61
ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea ma...   232   7e-59
ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-li...   229   8e-58
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V...   224   3e-56
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm...   218   1e-54
ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-li...   216   4e-54
gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]       216   7e-54
ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citr...   215   1e-53
ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-li...   212   8e-53
gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]               211   1e-52
ref|XP_006378282.1| DNA polymerase alpha subunit B family protei...   209   7e-52
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi...   205   1e-50
ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [A...   201   2e-49
ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-li...   199   7e-49
ref|XP_004502325.1| PREDICTED: DNA polymerase alpha subunit B-li...   199   9e-49
ref|XP_004502324.1| PREDICTED: DNA polymerase alpha subunit B-li...   199   9e-49

>dbj|BAK05466.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 625

 Score =  249 bits (635), Expect = 8e-64
 Identities = 120/230 (52%), Positives = 165/230 (71%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S +DLVS+WE+YYLNRQL   KVE+++++GFLS+L+ E+ EK+ KEE  LH+YSS+DV+M
Sbjct: 41  SPADLVSNWEVYYLNRQLDGLKVESSYLDGFLSHLQNEVKEKLIKEETDLHIYSSNDVDM 100

Query: 510 LLGEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
           LL   +  +  I+D PS + E+  +DS++S  TP T    SS R  K    RITPF QR+
Sbjct: 101 LLSNTHTDEEGILDTPSTKQEKPHVDSSNSELTPLTTERPSSIRAAKTNGDRITPFAQRV 160

Query: 330 NKFTSQFLFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRT 151
           NKFT  ++ N  N  +  +  E+E  E+++IRR+QP+++C LQV R +PE GCRFMYDR 
Sbjct: 161 NKFTQHYVLNADNVASVPSKDEVETSEDELIRRIQPSQKCTLQVQRSKPEPGCRFMYDRM 220

Query: 150 EDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           ED+FNYL  RI + A  F+A+GL G+P DAT AS++N+ AVGMV CDGEG
Sbjct: 221 EDRFNYLEGRIGRSARLFSATGLCGQPADATLASEENMFAVGMVICDGEG 270


>gb|EEE53009.1| hypothetical protein OsJ_35699 [Oryza sativa Japonica Group]
          Length = 625

 Score =  247 bits (631), Expect = 2e-63
 Identities = 121/230 (52%), Positives = 165/230 (71%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S +DLVS+WE+YYLNRQL   K+E+++++GFLS+L+ E+ ++I KEE  LH+YSS+DV+M
Sbjct: 41  SPADLVSNWEVYYLNRQLNGLKLESSYLDGFLSHLQNEVKDRIIKEETSLHIYSSNDVDM 100

Query: 510 LLGEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
           LL   +  +   +D PS + E+   +S +S  TP T    SSSR  K    RITPF QR+
Sbjct: 101 LLSSTHTDEEGFLDTPSTKQEKPNGESCNSELTPLTTDRPSSSRLAKTNGDRITPFSQRV 160

Query: 330 NKFTSQFLFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRT 151
           NKFT Q++ N  N  +  +  E+E+ E++VIRRVQP++RC LQV R QPE GCRFMYDR 
Sbjct: 161 NKFTQQYVLNSDNVASVPSKDEIESTEDEVIRRVQPSKRCTLQVQRSQPEPGCRFMYDRI 220

Query: 150 EDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           ED+FNYL +RI +    F+ASGL GEP DAT AS++++ +VGMV CDGEG
Sbjct: 221 EDRFNYLEDRIRRSGSLFSASGLCGEPADATLASEESMFSVGMVICDGEG 270


>gb|EEC69071.1| hypothetical protein OsI_37935 [Oryza sativa Indica Group]
          Length = 625

 Score =  245 bits (626), Expect = 8e-63
 Identities = 120/230 (52%), Positives = 164/230 (71%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S +DLVS+WE+YYLNRQL   K+E+++++GFLS+L+ E+ ++I KEE  LH+YSS+DV+M
Sbjct: 41  SPADLVSNWEVYYLNRQLNGLKLESSYLDGFLSHLQNEVKDRIIKEETSLHIYSSNDVDM 100

Query: 510 LLGEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
           LL   +  +   +D PS + E+   +S +S  TP T    SSSR  K    RITPF QR+
Sbjct: 101 LLSSTHTDEEGFLDTPSTKQEKPNGESCNSELTPLTTDRPSSSRLAKTNGDRITPFSQRV 160

Query: 330 NKFTSQFLFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRT 151
           NKFT Q++ N  N  +  +  E+E+ E++VIRRVQP++RC LQV   QPE GCRFMYDR 
Sbjct: 161 NKFTQQYVLNSDNVASVPSKDEIESTEDEVIRRVQPSKRCTLQVQHSQPEPGCRFMYDRI 220

Query: 150 EDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           ED+FNYL +RI +    F+ASGL GEP DAT AS++++ +VGMV CDGEG
Sbjct: 221 EDRFNYLEDRIRRSGSLFSASGLCGEPADATLASEESMFSVGMVICDGEG 270


>ref|XP_002438164.1| hypothetical protein SORBIDRAFT_10g009040 [Sorghum bicolor]
           gi|241916387|gb|EER89531.1| hypothetical protein
           SORBIDRAFT_10g009040 [Sorghum bicolor]
          Length = 626

 Score =  242 bits (617), Expect = 9e-62
 Identities = 120/230 (52%), Positives = 166/230 (72%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S +DLVS+WE+YYLNRQL   K+E+++++GFLS+L+ E+ E+I KEE  LH+YSS+DV+M
Sbjct: 41  SPADLVSNWEVYYLNRQLDGLKLESSYLDGFLSHLQNEVKERIIKEEANLHIYSSNDVDM 100

Query: 510 LLGEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
           LL   +  ++   D P ++ E+   +S++S  TP T+   SSSR  K  + RITPF  R+
Sbjct: 101 LLSNSHADEVAFHDTPGSKQEKPPEESSNSELTPLTSDRPSSSRVAKTNADRITPFATRV 160

Query: 330 NKFTSQFLFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRT 151
           NKFT Q++ N  N+  S+ S+  E  E++VIRR+QP++RC+LQV R QPE GCRFMYDR 
Sbjct: 161 NKFTQQYVLNADNA-VSVPSKNAEITEDEVIRRIQPSQRCSLQVQRSQPEPGCRFMYDRM 219

Query: 150 EDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           ED+FNYL +RI K A  F+ASG  G+P DAT AS++ + AVG V CDGEG
Sbjct: 220 EDRFNYLEDRIRKSASLFSASGFCGQPADATLASEEKMFAVGTVACDGEG 269


>ref|XP_003578733.1| PREDICTED: DNA polymerase alpha subunit B-like [Brachypodium
           distachyon]
          Length = 625

 Score =  239 bits (609), Expect = 8e-61
 Identities = 118/230 (51%), Positives = 158/230 (68%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S +DLVS+WE+YYLNRQL   KVE+++++GFL++L+ E+ +K+ KEE  LHVYSS+D++M
Sbjct: 41  SPADLVSNWEVYYLNRQLDGLKVESSYLDGFLTHLQNEVKDKLIKEETDLHVYSSNDIDM 100

Query: 510 LLGEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
           LL      +   +D PS + E+   + ++S  TP T    SSSR  K    RITPF QR+
Sbjct: 101 LLNNALTEEEGFLDTPSTKLEKSHGEPSNSELTPLTTDRPSSSRAAKTNGDRITPFAQRV 160

Query: 330 NKFTSQFLFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRT 151
           NKF   ++ N  +  N  +  E+E  E+++IRRVQP +RC LQV R  PE GCRFMYDR 
Sbjct: 161 NKFAQHYVLNADDMANVPSKPEVETSEDELIRRVQPRQRCTLQVQRSHPEPGCRFMYDRM 220

Query: 150 EDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           ED+FNYL +RI   A  F+A+GL GEP DAT AS+ N+ AVGMV CDGEG
Sbjct: 221 EDRFNYLEDRIRSSASLFSATGLCGEPADATLASEDNMFAVGMVICDGEG 270


>ref|NP_001130410.1| uncharacterized protein LOC100191506 [Zea mays]
           gi|194689050|gb|ACF78609.1| unknown [Zea mays]
           gi|413916526|gb|AFW56458.1| hypothetical protein
           ZEAMMB73_686460 [Zea mays]
          Length = 626

 Score =  232 bits (592), Expect = 7e-59
 Identities = 117/230 (50%), Positives = 159/230 (69%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S +DLVS+WE+YYLNRQL   K+E+++++GFLS+L+ E+ ++I KEE  LH+YSS+DV+M
Sbjct: 41  SPADLVSNWEVYYLNRQLDGLKLESSYLDGFLSHLQNEVKDRIIKEEANLHIYSSNDVDM 100

Query: 510 LLGEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
           LL   +  +    D P  + E+    S+ S  TP  +   SSSR  K  + RITPF  R+
Sbjct: 101 LLSNSHVDEAAFHDTPGYEQEKAPEGSSISELTPLASDRPSSSRVAKTNADRITPFATRV 160

Query: 330 NKFTSQFLFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRT 151
           NKFT Q++ N  N+   + S+  E  E+++IRRVQP++RC LQV R QPE GCRFMYDR 
Sbjct: 161 NKFTQQYVLNADNA-VGVPSKSAEITEDEIIRRVQPSQRCYLQVQRSQPEPGCRFMYDRM 219

Query: 150 EDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           ED+FNYL +RI K A  F+ASG  G+P DAT AS++ + AVG V CDGEG
Sbjct: 220 EDRFNYLEDRIRKSASLFSASGFCGQPADATLASEEKMFAVGTVACDGEG 269


>ref|XP_004960699.1| PREDICTED: DNA polymerase alpha subunit B-like [Setaria italica]
          Length = 627

 Score =  229 bits (583), Expect = 8e-58
 Identities = 112/230 (48%), Positives = 162/230 (70%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S +DLVS+WE+YYLNRQL   K++ ++++GF S+L+ E+ E+I +EE  LH+YSS+DV+M
Sbjct: 41  SPADLVSNWEVYYLNRQLDGLKLQRSYLDGFQSHLQNEVKERIIEEEADLHIYSSNDVDM 100

Query: 510 LLGEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
           LL   +  +   ++ P ++ E+   +  +S  T  ++R  SSSR  K    RITPF  R+
Sbjct: 101 LLNNSHADEAAFLETPGSKQEKTPGEPFNSELTLTSDRP-SSSRVAKTNGDRITPFATRV 159

Query: 330 NKFTSQFLFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRT 151
           NKFT Q++ N  N+ +  ++ E E  +++VI+R+QP++RC+LQV R QPE GCRFMYDR 
Sbjct: 160 NKFTQQYVLNADNAASMPSTHEAETTDDEVIKRIQPSQRCSLQVQRSQPEPGCRFMYDRM 219

Query: 150 EDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           ED+FNYL +R+ K A  F+ASG  GEP DAT AS++ + AVGMV CDGEG
Sbjct: 220 EDRFNYLEDRLRKSATLFSASGFCGEPADATLASEEKMFAVGMVTCDGEG 269


>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
           gi|297738371|emb|CBI27572.3| unnamed protein product
           [Vitis vinifera]
          Length = 623

 Score =  224 bits (570), Expect = 3e-56
 Identities = 119/232 (51%), Positives = 154/232 (66%), Gaps = 2/232 (0%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S SDLVS WE+YYLNRQL +  V  A M+GFL +L+ E  E + KEEP LH+YSS+DV+M
Sbjct: 38  SPSDLVSSWEVYYLNRQLDESVVGNALMDGFLLHLQNEQKEAVIKEEPHLHIYSSNDVDM 97

Query: 510 LLGEDNNTDMR-IIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQR 334
           +L +++      I+  PS++  R   D  DSA   RTN N SS   P +    +TPFG+R
Sbjct: 98  ILSDEHEEIKEDILGTPSDRSGRHHADPFDSAQ--RTNGNSSSYGKPSN---HVTPFGKR 152

Query: 333 INKFTSQFLFNYQNS-DNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYD 157
            +KF  Q   N   S +N     + EN+++D+IRRVQP++RC+L VH  +P  GCRFMYD
Sbjct: 153 TSKFVVQLTVNNPPSAENGKNENKFENVDDDIIRRVQPSKRCSLLVHGSRPGPGCRFMYD 212

Query: 156 RTEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           R ED+FN L NRI KH  A  A+GLY EPTD T ASQK++ A GM+CCDGEG
Sbjct: 213 RIEDRFNSLENRIKKHTTALVATGLYKEPTDPTVASQKSVFATGMICCDGEG 264


>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
           gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
           putative [Ricinus communis]
          Length = 621

 Score =  218 bits (555), Expect = 1e-54
 Identities = 114/231 (49%), Positives = 151/231 (65%), Gaps = 3/231 (1%)
 Frame = -2

Query: 684 SDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEMLL 505
           +DLVS WE+YYLNRQL +  V+   M+GFL +L+ E  E I KEEP LH+YSS DV+M+L
Sbjct: 39  ADLVSSWEVYYLNRQLDESTVQNGEMDGFLLHLQNEQKEAIIKEEPDLHIYSSKDVDMIL 98

Query: 504 GEDNNTDMR--IIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
             D   D++  +   P+++ ++L  +  DS      N   S  R     S  +TPFG+R 
Sbjct: 99  N-DEGEDLKEEVPGTPTDESQKLNSEPFDSIIKSTGNGYSSGKR-----SKHVTPFGRRT 152

Query: 330 NKFTSQF-LFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDR 154
           +KF  +F + N  +++N       ENME+D+I+RVQP ++C+  VH   PE GCRFMYDR
Sbjct: 153 DKFVVKFNINNLPDTENGDNEHVRENMEDDIIKRVQPRKKCSFVVHGSGPEPGCRFMYDR 212

Query: 153 TEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
            ED+FN L NRI KHA A  ASGLY EPTD T ASQ+N+ AVGM+CCDGEG
Sbjct: 213 IEDRFNALDNRIRKHAAALVASGLYEEPTDPTVASQRNVFAVGMICCDGEG 263


>ref|XP_006484041.1| PREDICTED: DNA polymerase alpha subunit B-like [Citrus sinensis]
          Length = 620

 Score =  216 bits (551), Expect = 4e-54
 Identities = 116/230 (50%), Positives = 153/230 (66%), Gaps = 2/230 (0%)
 Frame = -2

Query: 684 SDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEMLL 505
           SDLVS WE+YYLNRQL +  V+   M+GF+ +L+ E  E I KEEP LH+YSS DV+M+L
Sbjct: 38  SDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMIL 97

Query: 504 G-EDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRIN 328
             ED N    I+  P++   +L  D+ DS  T + N N  SS  P  ++   TPFG+R  
Sbjct: 98  NNEDENIAEDILGTPTDNL-KLYSDALDS--TYKANANGYSSDKPSKLA---TPFGRRTE 151

Query: 327 KFTSQF-LFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRT 151
           K   +F + N  N++N     + EN E+D+I+RV+  E+C+L VH   PE GCRFMYDRT
Sbjct: 152 KLVVKFNINNLPNTENGCIEHDDENTEDDIIKRVKTGEKCSLMVHGSGPEPGCRFMYDRT 211

Query: 150 EDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           ED+FN L NRI KHA+A  +SGLY EPTD T ASQ+ + AVGM+CCDG+G
Sbjct: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDG 261


>gb|EXB94967.1| DNA polymerase alpha subunit B [Morus notabilis]
          Length = 670

 Score =  216 bits (549), Expect = 7e-54
 Identities = 116/229 (50%), Positives = 149/229 (65%), Gaps = 2/229 (0%)
 Frame = -2

Query: 681 DLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEMLLG 502
           D+VS WE+YYLNRQL    V+ A M+GFL +L+ E  E I KEEP LH+YSS DV+M+L 
Sbjct: 39  DIVSSWEVYYLNRQLNGSTVQNAEMDGFLLHLQDEQKEAIIKEEPGLHIYSSKDVDMILN 98

Query: 501 -EDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRINK 325
            ED +    +   P+   +    +  DS  TP+TN  + SS  P  +   ITPFGQR  K
Sbjct: 99  DEDGDEKEEVPGTPTRNSQDSYSEQFDS--TPQTNGKIFSSGKPSKL---ITPFGQRTQK 153

Query: 324 FTSQFLFNYQ-NSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRTE 148
           F  +F  N   N +N  T  + EN E+DVIR++QP  RC+L VH  +P +GCRFMYDR E
Sbjct: 154 FVVKFSINSMPNMENGETELDPENNEDDVIRKIQPGRRCSLIVHGSKPGTGCRFMYDRIE 213

Query: 147 DQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           D+FN L +RI K+A AFT+S LY EP D T +SQK+I  VGM+CCDGEG
Sbjct: 214 DRFNALESRIRKYAVAFTSSKLYEEPVDPTVSSQKSIFTVGMICCDGEG 262


>ref|XP_006438110.1| hypothetical protein CICLE_v10030973mg [Citrus clementina]
           gi|557540306|gb|ESR51350.1| hypothetical protein
           CICLE_v10030973mg [Citrus clementina]
          Length = 620

 Score =  215 bits (547), Expect = 1e-53
 Identities = 115/230 (50%), Positives = 153/230 (66%), Gaps = 2/230 (0%)
 Frame = -2

Query: 684 SDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEMLL 505
           SDLVS WE+YYLNRQL +  V+   M+GF+ +L+ E  E I KEEP LH+YSS DV+M+L
Sbjct: 38  SDLVSSWEVYYLNRQLDESTVKDDEMDGFMLHLQNEQKEAIIKEEPSLHIYSSKDVDMIL 97

Query: 504 G-EDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRIN 328
             ED N    I+  P++   +L  D+ DS  T + N N  SS  P  ++   TPFG+R  
Sbjct: 98  NNEDENIAEDILGTPTDNL-KLYSDALDS--TYKANANGYSSDKPSKLA---TPFGRRTE 151

Query: 327 KFTSQF-LFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDRT 151
           K   +F + N  N++N     + EN E+D+I+RV+  ++C+L VH   PE GCRFMYDRT
Sbjct: 152 KLVVKFNINNLPNTENGCIEHDDENTEDDIIKRVKTGKKCSLMVHGSGPEPGCRFMYDRT 211

Query: 150 EDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           ED+FN L NRI KHA+A  +SGLY EPTD T ASQ+ + AVGM+CCDG+G
Sbjct: 212 EDRFNALENRIRKHANALVSSGLYEEPTDPTVASQRTLFAVGMICCDGDG 261


>ref|XP_004310044.1| PREDICTED: DNA polymerase alpha subunit B-like [Fragaria vesca
           subsp. vesca]
          Length = 620

 Score =  212 bits (540), Expect = 8e-53
 Identities = 117/232 (50%), Positives = 154/232 (66%), Gaps = 4/232 (1%)
 Frame = -2

Query: 684 SDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKI-TKEEPRLHVYSSDDVEML 508
           SDLVS WEIYYLNRQL +  V    M GFL +L+ E  E I +KEEP LH+YSS+DV+M+
Sbjct: 38  SDLVSSWEIYYLNRQLNEPVVRDVEMEGFLQHLQNEQKEAINSKEEPGLHIYSSNDVDMI 97

Query: 507 L-GEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
           L GED + +  ++  P ++ +    DS DS  TP+TN N+ SS  P  +   ITPFG+R 
Sbjct: 98  LNGEDVDIEETVLHTPISKSQNRYSDSFDS--TPQTNGNVPSSGKPTKL---ITPFGRRT 152

Query: 330 NKFTSQF-LFNYQNSDNSLTSQELENMEND-VIRRVQPTERCNLQVHRLQPESGCRFMYD 157
           +KF  +F + N  N++N     E EN ++D +IRRV+P +RC+L VH   PE  CRFMYD
Sbjct: 153 DKFVVKFSIENMPNTENVKKEDENENQDDDDIIRRVKPGKRCSLVVHGSGPEIDCRFMYD 212

Query: 156 RTEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           R  D+FN L NRI+KHA    +SG Y EP D T +S+K+I  VGM+CCDGEG
Sbjct: 213 RIADRFNALENRILKHATELVSSGQYEEPVDPTVSSEKSIFTVGMICCDGEG 264


>gb|EOY00828.1| DNA polymerase alpha 2 [Theobroma cacao]
          Length = 621

 Score =  211 bits (538), Expect = 1e-52
 Identities = 120/236 (50%), Positives = 156/236 (66%), Gaps = 8/236 (3%)
 Frame = -2

Query: 684 SDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEMLL 505
           SDLVS WE+YYLNRQL +  V+ A M+GF  +L+ E +E + K+EP L++YS  DV+M+L
Sbjct: 38  SDLVSSWEVYYLNRQLDESVVKDAEMDGFSGHLQNEQVEAVVKKEPDLYMYSFKDVDMIL 97

Query: 504 -GEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNL-SSSRDPKDISIRITPFGQRI 331
             ED +T   I+  P+++ E+L  D  DSA   +TN N+ SS R PK    ++TPFG R 
Sbjct: 98  DAEDEDTKEVILRTPTDKSEKLHSDLYDSAQ--KTNSNIYSSRRTPK----QVTPFGTRS 151

Query: 330 NKFTSQFLFNYQNSDNSLTSQEL------ENMENDVIRRVQPTERCNLQVHRLQPESGCR 169
           NKF  +F     N DN  TS+ +      EN+E+ VI+R+QP +RC+L VH   PE GCR
Sbjct: 152 NKFVVKF-----NIDNLPTSETVNGMHDHENLEDAVIKRIQPQKRCSLVVHSSGPEPGCR 206

Query: 168 FMYDRTEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           FMYDR ED FN L NRI KHA A  ASGLY EP D + ASQ++I AVGM+ CD EG
Sbjct: 207 FMYDRIEDGFNALENRIRKHAAALVASGLYQEPMDPSVASQRSIFAVGMIFCDDEG 262


>ref|XP_006378282.1| DNA polymerase alpha subunit B family protein [Populus trichocarpa]
           gi|550329229|gb|ERP56079.1| DNA polymerase alpha subunit
           B family protein [Populus trichocarpa]
          Length = 618

 Score =  209 bits (532), Expect = 7e-52
 Identities = 112/232 (48%), Positives = 150/232 (64%), Gaps = 4/232 (1%)
 Frame = -2

Query: 684 SDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEMLL 505
           SDLVS WE+YYLNR L +  V  A M+GFL +L+ E  E + KEEP L++YSS DV+M+L
Sbjct: 38  SDLVSSWEVYYLNRLLDESTVRNAEMDGFLLHLQNEQKEAVVKEEPNLYIYSSKDVDMIL 97

Query: 504 GEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRINK 325
             D   D++     +   + L ++S    + P++  N  SS  P  +   +TPFG+R +K
Sbjct: 98  NYDEE-DLKEEVPGTPTDKSLKLNSEPFNSPPKSYGNGYSSGKPSKL---VTPFGRRTDK 153

Query: 324 FTSQFLFN----YQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYD 157
           F  +F  N     +N+D      +  N+E+++I+R QP +RC+L VHRL PE GCRFMYD
Sbjct: 154 FVVKFNINSLPVVENNDGE---HDHGNLEDEIIKRAQPCKRCSLMVHRLGPEPGCRFMYD 210

Query: 156 RTEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           + ED+FN L NRI KHA A  ASGLY EP D T ASQ+NI AVGM+CCDGEG
Sbjct: 211 KIEDRFNALENRIRKHAIALFASGLYEEPMDPTVASQRNIFAVGMICCDGEG 262


>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
           lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
           subunit B family [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  205 bits (522), Expect = 1e-50
 Identities = 115/235 (48%), Positives = 152/235 (64%), Gaps = 7/235 (2%)
 Frame = -2

Query: 684 SDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITK-EEPRLHVYSSDDVEML 508
           SDLVS WE+Y+LNRQL D  V+   M+GF+ +L+ E  E I + EE  LH+YS+ DV+ML
Sbjct: 40  SDLVSSWELYHLNRQLLDQTVKKDEMDGFVLHLQNEQKESIMRAEEAGLHLYSNRDVDML 99

Query: 507 LGEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRD-----PKDISIRITPF 343
           L         I+  P+N+ +RL  D  DS         +S SRD      K +   +TPF
Sbjct: 100 LDGVQEDTEEIVTTPTNESQRLHPDPFDS---------ISRSRDYGYSTGKSVG-HVTPF 149

Query: 342 GQRINKFTSQF-LFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRF 166
           G RI KF  +F + N   ++N   S E+EN E+D+I+RVQ ++RC+L+V+   PE GCRF
Sbjct: 150 GSRIEKFVVKFNVGNVAPAENG-NSNEIENSEDDIIKRVQTSQRCSLEVNGSGPEPGCRF 208

Query: 165 MYDRTEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           MYDRTED+FN L NRI++HA AF ASGLY E  D   ASQ++I AVGM+CCDGEG
Sbjct: 209 MYDRTEDRFNVLENRIVRHADAFAASGLYEEQVDPAVASQRSIFAVGMICCDGEG 263


>ref|XP_006858888.1| hypothetical protein AMTR_s00066p00201540 [Amborella trichopoda]
           gi|548862999|gb|ERN20355.1| hypothetical protein
           AMTR_s00066p00201540 [Amborella trichopoda]
          Length = 628

 Score =  201 bits (510), Expect = 2e-49
 Identities = 111/239 (46%), Positives = 148/239 (61%), Gaps = 9/239 (3%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S SDLVS W +YYLN QL   KV+ AH++GFL +L+ +    I KEE  +H+YSS+DV M
Sbjct: 36  SPSDLVSSWVVYYLNMQLDGSKVQNAHVDGFLHHLQNKQKHNILKEESNVHMYSSNDVNM 95

Query: 510 LLGEDNNT-DMRIIDDPSNQ--YERLGMDSNDSAT------TPRTNRNLSSSRDPKDISI 358
           LLGE++   +  ++D P  Q  ++ L    ND +T      +P  N    S +  +  S 
Sbjct: 96  LLGEEHKDGEEGMLDTPIKQSYFDNL----NDLSTPISMDRSPERNGKSISEKSSRRTSS 151

Query: 357 RITPFGQRINKFTSQFLFNYQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPES 178
           + TPFGQR NKF  Q  FN  +  +     E++ + +DVIRRVQ  E C+LQV    P+ 
Sbjct: 152 QATPFGQRTNKFLLQLSFNSHSKADDTKDLEIDALGDDVIRRVQDIESCSLQVQGSWPKP 211

Query: 177 GCRFMYDRTEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           G RFMYD+ ED+FN L NRI + + A  ASG  GEP+DAT ASQK + +VGMVCCDGEG
Sbjct: 212 GFRFMYDKVEDRFNALENRIRRLSSALVASGECGEPSDATLASQKTLFSVGMVCCDGEG 270


>ref|XP_006341754.1| PREDICTED: DNA polymerase alpha subunit B-like [Solanum tuberosum]
          Length = 617

 Score =  199 bits (506), Expect = 7e-49
 Identities = 109/231 (47%), Positives = 147/231 (63%), Gaps = 1/231 (0%)
 Frame = -2

Query: 690 SASDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEM 511
           S SDLVS W++Y LNR L    V+++HM  FL  L+ E  E I K+EP LH YSSD   M
Sbjct: 36  SPSDLVSSWDVYSLNRGL-QLTVQSSHMGAFLQQLQNERREDIVKKEPGLHFYSSDISMM 94

Query: 510 LLGEDNNTDMRIIDDPSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQRI 331
           L  E  NT   I+  P+++  R    S    +  +TN ++S+SR   +    ITPFGQR 
Sbjct: 95  LNDEYENTKEIILGTPTDK--RKTSQSETIVSARKTNGSISTSRKHLET---ITPFGQRK 149

Query: 330 NKFTSQFLFNYQ-NSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCRFMYDR 154
           +KF  QF  N   N ++     + EN+ +D+I+RVQP +RC+LQ+   QPE GCRFMYDR
Sbjct: 150 SKFVVQFTLNENANGESMKIENDEENLNDDIIKRVQPIKRCSLQIISSQPEPGCRFMYDR 209

Query: 153 TEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           TE++FN+L +RI  H  A  ASGL+ EPTD T ASQ+++ AVGM+CC+ EG
Sbjct: 210 TENKFNFLESRIKDHTTALVASGLHEEPTDPTVASQRSVFAVGMICCEEEG 260


>ref|XP_004502325.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X2 [Cicer
           arietinum]
          Length = 524

 Score =  199 bits (505), Expect = 9e-49
 Identities = 111/236 (47%), Positives = 145/236 (61%), Gaps = 8/236 (3%)
 Frame = -2

Query: 684 SDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEMLL 505
           SDLVS WE+YYLNRQL +  VE A M GFL +L+    E I KEE  LH+YS  DVEM+L
Sbjct: 38  SDLVSSWEVYYLNRQLNEPTVENAEMEGFLIHLQNITKEDIIKEETGLHLYSIKDVEMIL 97

Query: 504 GEDNNTDMRIIDD----PSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQ 337
              NN D  I DD    P+N ++ +   ++D   TP    N+ +S  P ++   +TPF +
Sbjct: 98  ---NNVDDDIKDDTPSTPTNHHQNVYSPTHD---TPSLYGNVLASGKPANL---VTPFSK 148

Query: 336 RINKFTSQFLFN----YQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCR 169
           R ++F  +F  N     +N    L  +  EN E  ++ RVQ  +RC+L  H   P+ GCR
Sbjct: 149 RKDRFAVKFSINTMPDVENGRQELNHENAENDEYSIVTRVQTRKRCSLVFHGSGPKPGCR 208

Query: 168 FMYDRTEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           FMYDRTED+ N + +RI KHA A  ASGLY EPTD T AS ++I AVGM+CCDGEG
Sbjct: 209 FMYDRTEDRINAIESRIRKHARALVASGLYEEPTDPTVASPRSIFAVGMICCDGEG 264


>ref|XP_004502324.1| PREDICTED: DNA polymerase alpha subunit B-like isoform X1 [Cicer
           arietinum]
          Length = 616

 Score =  199 bits (505), Expect = 9e-49
 Identities = 111/236 (47%), Positives = 145/236 (61%), Gaps = 8/236 (3%)
 Frame = -2

Query: 684 SDLVSHWEIYYLNRQLTDWKVETAHMNGFLSYLRKEMMEKITKEEPRLHVYSSDDVEMLL 505
           SDLVS WE+YYLNRQL +  VE A M GFL +L+    E I KEE  LH+YS  DVEM+L
Sbjct: 38  SDLVSSWEVYYLNRQLNEPTVENAEMEGFLIHLQNITKEDIIKEETGLHLYSIKDVEMIL 97

Query: 504 GEDNNTDMRIIDD----PSNQYERLGMDSNDSATTPRTNRNLSSSRDPKDISIRITPFGQ 337
              NN D  I DD    P+N ++ +   ++D   TP    N+ +S  P ++   +TPF +
Sbjct: 98  ---NNVDDDIKDDTPSTPTNHHQNVYSPTHD---TPSLYGNVLASGKPANL---VTPFSK 148

Query: 336 RINKFTSQFLFN----YQNSDNSLTSQELENMENDVIRRVQPTERCNLQVHRLQPESGCR 169
           R ++F  +F  N     +N    L  +  EN E  ++ RVQ  +RC+L  H   P+ GCR
Sbjct: 149 RKDRFAVKFSINTMPDVENGRQELNHENAENDEYSIVTRVQTRKRCSLVFHGSGPKPGCR 208

Query: 168 FMYDRTEDQFNYLANRIMKHAHAFTASGLYGEPTDATFASQKNILAVGMVCCDGEG 1
           FMYDRTED+ N + +RI KHA A  ASGLY EPTD T AS ++I AVGM+CCDGEG
Sbjct: 209 FMYDRTEDRINAIESRIRKHARALVASGLYEEPTDPTVASPRSIFAVGMICCDGEG 264