BLASTX nr result
ID: Zingiber24_contig00039368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00039368
(575 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006842713.1| hypothetical protein AMTR_s00147p00097570 [A... 105 8e-21
gb|ADE76547.1| unknown [Picea sitchensis] 105 8e-21
ref|XP_004288384.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
gb|EMJ16073.1| hypothetical protein PRUPE_ppa024881mg [Prunus pe... 103 3e-20
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr... 103 4e-20
gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis] 102 5e-20
gb|EXB38470.1| hypothetical protein L484_022371 [Morus notabilis] 102 5e-20
ref|XP_006407092.1| hypothetical protein EUTSA_v10020249mg [Eutr... 102 9e-20
dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana] 101 1e-19
ref|XP_006297069.1| hypothetical protein CARUB_v10013070mg [Caps... 101 1e-19
ref|NP_188050.1| pentatricopeptide repeat-containing protein [Ar... 101 1e-19
gb|EMJ20061.1| hypothetical protein PRUPE_ppa002838mg [Prunus pe... 101 2e-19
ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containi... 101 2e-19
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr... 101 2e-19
gb|EXB37173.1| hypothetical protein L484_013537 [Morus notabilis] 100 2e-19
gb|ESW24601.1| hypothetical protein PHAVU_004G144300g [Phaseolus... 100 2e-19
ref|XP_006352475.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
gb|EMJ05621.1| hypothetical protein PRUPE_ppb002215mg [Prunus pe... 100 3e-19
ref|XP_004250548.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
>ref|XP_006842713.1| hypothetical protein AMTR_s00147p00097570 [Amborella trichopoda]
gi|548844814|gb|ERN04388.1| hypothetical protein
AMTR_s00147p00097570 [Amborella trichopoda]
Length = 393
Score = 105 bits (262), Expect = 8e-21
Identities = 55/113 (48%), Positives = 71/113 (62%)
Frame = +2
Query: 23 VGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAVR 202
VG SVWGALL AC + GD GEIAAQ LFELEPECS SY+ LS I+ +W +A A+R
Sbjct: 256 VGASVWGALLGACAMQGDDMFGEIAAQHLFELEPECSASYVLLSKIFVMRGRWDDAVAMR 315
Query: 203 ELMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIWFVETRLACF 361
+ M+ + I K+AG SWIE+ +H F AG S T + +++RL F
Sbjct: 316 KKMNCQGIRKEAGCSWIEIESEIHEFVAGDRSHPRITEIKSLLKGLDSRLRSF 368
>gb|ADE76547.1| unknown [Picea sitchensis]
Length = 210
Score = 105 bits (262), Expect = 8e-21
Identities = 43/85 (50%), Positives = 67/85 (78%)
Frame = +2
Query: 35 VWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAVRELMD 214
VWGALL++C++HG+ +G++AA++LF+L P+ +G+Y+ALSNIYSA +W EA +R LM+
Sbjct: 9 VWGALLASCRIHGNMWLGKLAAERLFKLRPDRAGTYVALSNIYSAAGRWDEAAKLRRLMN 68
Query: 215 ERNISKDAGHSWIEVGGMVHRFRAG 289
+R + K+ G+SW++V MVH F G
Sbjct: 69 DRGVKKEPGYSWVQVKNMVHTFSVG 93
>ref|XP_004288384.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Fragaria vesca subsp. vesca]
Length = 642
Score = 103 bits (257), Expect = 3e-20
Identities = 46/111 (41%), Positives = 68/111 (61%)
Frame = +2
Query: 2 ISTSACKVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQW 181
+ T K S+WG++L++C+L G ++ E AA +LFELEP G+Y+ LSN+Y+ W
Sbjct: 429 VETMPMKPSGSIWGSILNSCRLKGKVSLAERAATELFELEPNNPGNYVVLSNVYANAGMW 488
Query: 182 REANAVRELMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIW 334
N VRELM ER + K+AG SW+++G +H F AG G + K +W
Sbjct: 489 EGVNRVRELMKERGLKKEAGCSWLQIGSRIHTFVAGGGFQFRNSAEFKKVW 539
>gb|EMJ16073.1| hypothetical protein PRUPE_ppa024881mg [Prunus persica]
Length = 621
Score = 103 bits (257), Expect = 3e-20
Identities = 45/101 (44%), Positives = 66/101 (65%)
Frame = +2
Query: 32 SVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAVRELM 211
S+WG+LL++C+L G+ ++ E AA++LFELEP G+Y+ LSN+Y+ W + N VRELM
Sbjct: 418 SIWGSLLNSCRLQGNVSLAEFAAKELFELEPTNPGNYVMLSNVYANAGMWNDVNRVRELM 477
Query: 212 DERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIW 334
R I KDAG SW+++ +H F AG G + K +W
Sbjct: 478 KHRGIKKDAGCSWVQIRNRIHTFLAGGGFEFRNSAEFKKVW 518
>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 103 bits (256), Expect = 4e-20
Identities = 47/93 (50%), Positives = 68/93 (73%)
Frame = +2
Query: 2 ISTSACKVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQW 181
I T + GPSVWGALLSAC++H D GE AA+ + +L+P+ G+Y+ALSNIY+A ++
Sbjct: 559 ILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDGAYVALSNIYAAAGRY 618
Query: 182 REANAVRELMDERNISKDAGHSWIEVGGMVHRF 280
+A VR++M++R++ K+ G SWIEV G VH F
Sbjct: 619 EDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHVF 651
>gb|EXB41187.1| hypothetical protein L484_005223 [Morus notabilis]
Length = 622
Score = 102 bits (255), Expect = 5e-20
Identities = 47/90 (52%), Positives = 61/90 (67%)
Frame = +2
Query: 20 KVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAV 199
K +VWG LL+ C +HGD IG +AAQKL E EPE +G+Y+ LSN+Y++ +WREA +
Sbjct: 495 KPSTTVWGTLLAGCNVHGDMNIGRLAAQKLLEYEPENAGTYLLLSNVYASSGKWREAAKM 554
Query: 200 RELMDERNISKDAGHSWIEVGGMVHRFRAG 289
R M E+ + K G SWIEVG MVH F G
Sbjct: 555 RLKMKEKGLKKQPGCSWIEVGNMVHVFVVG 584
>gb|EXB38470.1| hypothetical protein L484_022371 [Morus notabilis]
Length = 858
Score = 102 bits (255), Expect = 5e-20
Identities = 56/129 (43%), Positives = 76/129 (58%)
Frame = +2
Query: 26 GPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAVRE 205
G +VW LL+AC + D +G+ AA+KL L+PE S +Y+ LSNIY+A W+E N VR+
Sbjct: 654 GATVWRTLLAACHVRRDLELGKFAAEKLISLQPEDSAAYVLLSNIYAATGNWQERNTVRK 713
Query: 206 LMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIWFVETRLACFCL*YIQRE 385
LMDER + K+AG+SWIEV H F A G L H Y E R+ + Y Q +
Sbjct: 714 LMDERKVKKEAGYSWIEVKHKTHSFLA--GDLSHPMAENIYSKLEELRIRLKDMGY-QPD 770
Query: 386 LHYAIHFFE 412
+Y +H E
Sbjct: 771 TNYVLHDVE 779
>ref|XP_006407092.1| hypothetical protein EUTSA_v10020249mg [Eutrema salsugineum]
gi|557108238|gb|ESQ48545.1| hypothetical protein
EUTSA_v10020249mg [Eutrema salsugineum]
Length = 654
Score = 102 bits (253), Expect = 9e-20
Identities = 46/111 (41%), Positives = 72/111 (64%)
Frame = +2
Query: 2 ISTSACKVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQW 181
+ T K S+WG+LL++C+LHG+ ++GEIAA++LF LEP G+Y+ +SN+Y+ K W
Sbjct: 441 VETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPRNPGNYVMVSNLYADAKMW 500
Query: 182 REANAVRELMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIW 334
+ + +RE+M +R I K+AG SWI+V + F AG G + K +W
Sbjct: 501 EKVDKIREMMKQRGIRKEAGCSWIQVKDKIQIFVAGGGYEFRNSDEYKKVW 551
>dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
Length = 717
Score = 101 bits (252), Expect = 1e-19
Identities = 46/111 (41%), Positives = 71/111 (63%)
Frame = +2
Query: 2 ISTSACKVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQW 181
I T K S+WG+LL++C+LHG+ ++GEIAA++LF LEP G+Y+ +SNIY+ K W
Sbjct: 504 IETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMW 563
Query: 182 REANAVRELMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIW 334
+ +RE+M +R + K+AG SW++V + F AG G + K +W
Sbjct: 564 DNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVW 614
>ref|XP_006297069.1| hypothetical protein CARUB_v10013070mg [Capsella rubella]
gi|482565778|gb|EOA29967.1| hypothetical protein
CARUB_v10013070mg [Capsella rubella]
Length = 721
Score = 101 bits (252), Expect = 1e-19
Identities = 46/111 (41%), Positives = 70/111 (63%)
Frame = +2
Query: 2 ISTSACKVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQW 181
I T K S+WG+LL++C+LHG+ +GE+AA++LF LEP G+Y+ +SNIY+ K W
Sbjct: 508 IETMPFKPSASIWGSLLNSCRLHGNVLVGEVAAKELFVLEPHNPGNYVMISNIYADAKMW 567
Query: 182 REANAVRELMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIW 334
N +RE+M +R I K+ G SW++V + F AG G ++ K +W
Sbjct: 568 DNVNKIREMMRQRGIKKEVGCSWVQVKDKIQIFVAGGGYEFRSSDEYKKVW 618
>ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g14330 gi|332641981|gb|AEE75502.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 101 bits (252), Expect = 1e-19
Identities = 46/111 (41%), Positives = 71/111 (63%)
Frame = +2
Query: 2 ISTSACKVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQW 181
I T K S+WG+LL++C+LHG+ ++GEIAA++LF LEP G+Y+ +SNIY+ K W
Sbjct: 497 IETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMW 556
Query: 182 REANAVRELMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIW 334
+ +RE+M +R + K+AG SW++V + F AG G + K +W
Sbjct: 557 DNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVW 607
>gb|EMJ20061.1| hypothetical protein PRUPE_ppa002838mg [Prunus persica]
Length = 628
Score = 101 bits (251), Expect = 2e-19
Identities = 47/96 (48%), Positives = 64/96 (66%)
Frame = +2
Query: 2 ISTSACKVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQW 181
+S + GPS+WGALLSAC+ H + I EIAA+KLF LEP+ SG+Y+ LSNIY+ W
Sbjct: 415 VSKMPMQAGPSIWGALLSACRKHHNLEIAEIAARKLFILEPDNSGNYVLLSNIYADAGMW 474
Query: 182 REANAVRELMDERNISKDAGHSWIEVGGMVHRFRAG 289
+E + +R L+ + + K+ G SWIEV G H F G
Sbjct: 475 KEVDDLRALLKSQGMKKNPGCSWIEVNGKAHLFLGG 510
>ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Solanum lycopersicum]
Length = 828
Score = 101 bits (251), Expect = 2e-19
Identities = 48/96 (50%), Positives = 65/96 (67%)
Frame = +2
Query: 2 ISTSACKVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQW 181
IST + VWGALLS+C+ H + ++GEIAA KLFELEP+ G+YI LSNIY++ +W
Sbjct: 616 ISTMPIEPDACVWGALLSSCRTHRNMSLGEIAADKLFELEPKNPGNYILLSNIYASNNRW 675
Query: 182 REANAVRELMDERNISKDAGHSWIEVGGMVHRFRAG 289
E + VR++M +SK+ G SWIE+ VH AG
Sbjct: 676 NEVDKVRDMMKHVGLSKNPGCSWIEIKNKVHMLLAG 711
>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 101 bits (251), Expect = 2e-19
Identities = 49/103 (47%), Positives = 68/103 (66%)
Frame = +2
Query: 2 ISTSACKVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQW 181
I T K ++WGALL+AC+ HG+ IGE AA++ +LEP+ +G+Y++LS IY+A W
Sbjct: 608 ILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMW 667
Query: 182 REANAVRELMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHT 310
R+ +R+LM ER + K+ G SWIEV G VH F AG S T
Sbjct: 668 RDVAKLRKLMKERGVKKEPGRSWIEVAGEVHSFVAGDQSHPRT 710
>gb|EXB37173.1| hypothetical protein L484_013537 [Morus notabilis]
Length = 312
Score = 100 bits (250), Expect = 2e-19
Identities = 47/89 (52%), Positives = 62/89 (69%)
Frame = +2
Query: 32 SVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAVRELM 211
+VWG+LL AC++H + + E AA+ LFELEP+ SG+YI L+NIYSA +W +A +R LM
Sbjct: 110 AVWGSLLGACRIHSNPNLAEYAAKHLFELEPQSSGNYILLANIYSAAGRWEDAAKIRGLM 169
Query: 212 DERNISKDAGHSWIEVGGMVHRFRAGRGS 298
ER ++K G SWIEV VH F AG S
Sbjct: 170 KERGVTKSPGCSWIEVKRKVHSFIAGDAS 198
>gb|ESW24601.1| hypothetical protein PHAVU_004G144300g [Phaseolus vulgaris]
Length = 601
Score = 100 bits (250), Expect = 2e-19
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +2
Query: 35 VWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAVRELMD 214
VWGALLS+C++H + ++GEIAA+KLF LEP G+Y+ LSNIY++ W E N +RE+M
Sbjct: 400 VWGALLSSCRVHNNLSLGEIAAEKLFPLEPANPGNYVLLSNIYASKGLWDEENRIREMMK 459
Query: 215 ERNISKDAGHSWIEVGGMVHRFRAG 289
+ + K+ G+SWIEVG VH AG
Sbjct: 460 SKGLRKNPGYSWIEVGHKVHMLLAG 484
>ref|XP_006352475.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Solanum tuberosum]
Length = 646
Score = 100 bits (249), Expect = 3e-19
Identities = 45/105 (42%), Positives = 67/105 (63%)
Frame = +2
Query: 20 KVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAV 199
K S+WG+LL++C+LHG+ ++ E+ A++LFE+EP G+Y+ LSNIY+ W V
Sbjct: 439 KPSGSIWGSLLNSCRLHGNVSLAELVAEQLFEMEPNNCGNYVMLSNIYANAGMWEGVKKV 498
Query: 200 RELMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIW 334
RE+M+ + I K+AG SWI+V VH F AG G + K +W
Sbjct: 499 REMMENKGIKKEAGCSWIQVRNKVHTFMAGGGFEFRNSDEYKEVW 543
>gb|EMJ05621.1| hypothetical protein PRUPE_ppb002215mg [Prunus persica]
Length = 634
Score = 100 bits (249), Expect = 3e-19
Identities = 46/90 (51%), Positives = 62/90 (68%)
Frame = +2
Query: 20 KVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAV 199
K+ SVWGALL+ C +HG+ IG++AA+KL E EPE +G+Y+ L NIY++ +WREA +
Sbjct: 506 KISASVWGALLAGCNVHGNMDIGKLAAEKLLEGEPEKAGTYLLLCNIYASSGKWREAAKI 565
Query: 200 RELMDERNISKDAGHSWIEVGGMVHRFRAG 289
R M E+ + K G SWIEVG VH F G
Sbjct: 566 RMKMKEKGLKKQPGCSWIEVGNKVHVFVVG 595
>ref|XP_004250548.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14330-like [Solanum lycopersicum]
Length = 646
Score = 100 bits (249), Expect = 3e-19
Identities = 45/105 (42%), Positives = 67/105 (63%)
Frame = +2
Query: 20 KVGPSVWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAV 199
K S+WG+LL++C+LHG+ ++ E+ A++LFE+EP G+Y+ LSNIY+ W V
Sbjct: 439 KPSGSIWGSLLNSCRLHGNVSLAELVAEQLFEMEPNNCGNYVILSNIYANAGMWEGVKKV 498
Query: 200 RELMDERNISKDAGHSWIEVGGMVHRFRAGRGSLDHTTV*MKYIW 334
RE+M+ + I K+AG SWI+V VH F AG G + K +W
Sbjct: 499 REMMENKGIKKEAGCSWIQVRNKVHTFMAGGGFEFRNSDEYKEVW 543
>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 100 bits (249), Expect = 3e-19
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +2
Query: 35 VWGALLSACKLHGDSTIGEIAAQKLFELEPECSGSYIALSNIYSAGKQWREANAVRELMD 214
VWGALLS+C++H + ++GE+AA+KLFELEP G+YI LSNIY++ W E N VR++M
Sbjct: 557 VWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMK 616
Query: 215 ERNISKDAGHSWIEVGGMVHRFRAG 289
+ + K+ G SWIEV VH AG
Sbjct: 617 NKGLRKNPGCSWIEVKNKVHMLLAG 641