BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00039344
         (292 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002452300.1| hypothetical protein SORBIDRAFT_04g023280 [S...    58   1e-06
ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subun...    57   2e-06
ref|XP_004952735.1| PREDICTED: ATP-dependent Clp protease ATP-bi...    56   6e-06
gb|AFW71882.1| hypothetical protein ZEAMMB73_870207 [Zea mays]         55   9e-06
gb|AFW71881.1| hypothetical protein ZEAMMB73_870207 [Zea mays]         55   9e-06

>ref|XP_002452300.1| hypothetical protein SORBIDRAFT_04g023280 [Sorghum bicolor]
           gi|241932131|gb|EES05276.1| hypothetical protein
           SORBIDRAFT_04g023280 [Sorghum bicolor]
          Length = 640

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 39/91 (42%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
 Frame = +3

Query: 42  PLGVATSHRRELLCQIRRR--SDDAGAGSGG------LEVPQVRRIRAEANCPRCSKHME 197
           PL     HRR    Q RR+  S  +G+GSGG       + P+ RRIRAEA+CPRCSKHM+
Sbjct: 31  PLPPPPPHRR---LQERRKWESSSSGSGSGGSSSSSSTDEPEPRRIRAEAHCPRCSKHMD 87

Query: 198 VLFSSQSXXXXXXAVLAXXXXXXXXYQAINL 290
           +LFS +          A        YQA+NL
Sbjct: 88  ILFSHRGPPPTTAGAGA-----AGGYQALNL 113


>ref|XP_002519956.1| ATP-dependent clp protease ATP-binding subunit clpx, putative
           [Ricinus communis] gi|223541002|gb|EEF42560.1|
           ATP-dependent clp protease ATP-binding subunit clpx,
           putative [Ricinus communis]
          Length = 698

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/57 (47%), Positives = 37/57 (64%)
 Frame = +3

Query: 45  LGVATSHRRELLCQIRRRSDDAGAGSGGLEVPQVRRIRAEANCPRCSKHMEVLFSSQ 215
           L +  + RRE L  ++ R    G G G      VR+IRAE+NCPRCSKHM++LFS++
Sbjct: 41  LNIGCNRRRESLIGLQERYKWDGNGDGNNNNSDVRKIRAESNCPRCSKHMDLLFSNR 97


>ref|XP_004952735.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit
           clpX-like, mitochondrial-like [Setaria italica]
          Length = 647

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
 Frame = +3

Query: 3   SVGRRISTARSGD--PLGVATSHRRELLCQIRRRSDDAGAG----SGGLEVPQVRRIRAE 164
           + GR  S A +G   PL     HRR    Q RR+ + + +G    S   + P+ RRIRAE
Sbjct: 27  AAGRECSPAAAGAAAPLPPPPPHRR---VQERRKWESSSSGGSSSSSSTDEPEPRRIRAE 83

Query: 165 ANCPRCSKHMEVLFS 209
           A+CPRCSKHM++LF+
Sbjct: 84  AHCPRCSKHMDILFA 98


>gb|AFW71882.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
          Length = 642

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
 Frame = +3

Query: 93  RRSDDAGAGSGG-----LEVPQVRRIRAEANCPRCSKHMEVLFSSQSXXXXXXAVLAXXX 257
           RR  ++ +GSGG      + P+ RRIRAEA+CPRCSKHM++LFS +       A      
Sbjct: 50  RRKWESSSGSGGSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPTAAAAA----- 104

Query: 258 XXXXXYQAINL 290
                YQA+NL
Sbjct: 105 ----GYQALNL 111


>gb|AFW71881.1| hypothetical protein ZEAMMB73_870207 [Zea mays]
          Length = 643

 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
 Frame = +3

Query: 93  RRSDDAGAGSGG-----LEVPQVRRIRAEANCPRCSKHMEVLFSSQSXXXXXXAVLAXXX 257
           RR  ++ +GSGG      + P+ RRIRAEA+CPRCSKHM++LFS +       A      
Sbjct: 50  RRKWESSSGSGGSSSSSTDEPEPRRIRAEAHCPRCSKHMDILFSHRGPPTAAAAA----- 104

Query: 258 XXXXXYQAINL 290
                YQA+NL
Sbjct: 105 ----GYQALNL 111