BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00039243
         (403 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily p...   174   1e-41
ref|XP_002888838.1| pentatricopeptide repeat-containing protein ...   173   2e-41
gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis]     170   2e-40
ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containi...   170   2e-40
ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutr...   169   5e-40
ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Caps...   168   8e-40
ref|NP_177302.1| pentatricopeptide repeat-containing protein [Ar...   167   1e-39
ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
ref|XP_002528030.1| pentatricopeptide repeat-containing protein,...   162   6e-38
ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containi...   161   7e-38
ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containi...   161   7e-38
ref|XP_003604235.1| Pentatricopeptide repeat-containing protein ...   159   3e-37
ref|XP_002325518.2| pentatricopeptide repeat-containing family p...   157   1e-36
ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containi...   156   3e-36
ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containi...   156   3e-36
gb|ESW11652.1| hypothetical protein PHAVU_008G048400g [Phaseolus...   155   5e-36
ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35
ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35
ref|XP_006854875.1| hypothetical protein AMTR_s00182p00046810 [A...   143   2e-32
gb|EPS73900.1| hypothetical protein M569_00856 [Genlisea aurea]       134   2e-29

>gb|EOY03311.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao]
          Length = 683

 Score =  174 bits (441), Expect = 1e-41
 Identities = 83/132 (62%), Positives = 104/132 (78%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           +AFP SLPLH+KNPHAI KDIQR AR  +L +ALAILDY+  +GIPVN TTF++LL+AC 
Sbjct: 61  NAFPSSLPLHTKNPHAIYKDIQRFARQNKLKEALAILDYVDQQGIPVNPTTFSSLLAACV 120

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K+LA GRQ+H H+RT+GLE NEFL  KL  MY +CGS DDA R+F E + + V++WNA
Sbjct: 121 RSKSLADGRQIHSHIRTNGLENNEFLRAKLAHMYTSCGSIDDALRVFDECTSKNVHSWNA 180

Query: 38  LLKGNVVRGGKR 3
           LL+G V+ G KR
Sbjct: 181 LLRGTVISGKKR 192



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/102 (28%), Positives = 58/102 (56%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+L++AL  + ++Q  G   ++ T A +L  C+  +AL+ G+++H +   +    N  ++
Sbjct: 394 GRLNQALRSVVWMQQEGFKPDVVTVATILPVCAELRALSHGKEIHAYAVKNCFFPNVSIV 453

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
             L+ MY+ CG  D + +LF+ +  R V +W A+++  V  G
Sbjct: 454 TSLMIMYSKCGVLDYSLKLFNGMEARNVISWTAMIESYVKSG 495



 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/103 (25%), Positives = 52/103 (50%)
 Frame = -3

Query: 338 IQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGL 159
           I+   + G LH+AL++   +Q      +    A +L+ CS  +A+  G+++H  +     
Sbjct: 488 IESYVKSGHLHEALSVFRSMQFSKHRPDSVAMARMLNVCSELRAVKLGKEIHGQVLKKDF 547

Query: 158 EGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLK 30
           E   F+   +V+MY +CG    A+ +F  +  +   TW A+++
Sbjct: 548 ESIPFVSAGIVKMYGSCGLISTAKLVFEAVPVKGTMTWTAIIE 590


>ref|XP_002888838.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297334679|gb|EFH65097.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 688

 Score =  173 bits (439), Expect = 2e-41
 Identities = 83/132 (62%), Positives = 100/132 (75%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLHSKNPH+I +DIQR AR   L  AL ILDYL+ RGIPVN TTF+ALL+AC 
Sbjct: 62  DAFPSSLPLHSKNPHSIHRDIQRFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACV 121

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K+L  G+QVHVH+R +GLE NEF+  KLV MY  CGS  DA+++F E +   VY+WNA
Sbjct: 122 RRKSLLHGKQVHVHIRINGLESNEFIRTKLVHMYTACGSVRDAQKVFDESTSSNVYSWNA 181

Query: 38  LLKGNVVRGGKR 3
           LL+G V+ G KR
Sbjct: 182 LLRGTVISGKKR 193



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/105 (29%), Positives = 53/105 (50%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+  +AL  + ++Q  G   ++ T A +L  C+  +A+  G+++H +   +    N  L+
Sbjct: 396 GRFDQALRSIVWMQQEGFKPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 455

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRGGKR 3
             L+ MY+ CG P+   RLF  L  R V  W A++   V  G  R
Sbjct: 456 TSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVENGDLR 500


>gb|EXC35649.1| hypothetical protein L484_001633 [Morus notabilis]
          Length = 647

 Score =  170 bits (431), Expect = 2e-40
 Identities = 82/132 (62%), Positives = 100/132 (75%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP+SLPLHSKNP A+  DIQR AR  +L +AL ILDY+  +GIPVN TTFAAL++AC 
Sbjct: 25  DAFPESLPLHSKNPRAVYSDIQRFARQNKLSQALTILDYMDQQGIPVNPTTFAALIAACV 84

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K+L  G+QVH  +R +GL+ NEFL  KLV MY +CGS DDA  LF E   R+VY WNA
Sbjct: 85  RTKSLDHGKQVHAFIRINGLDKNEFLRTKLVHMYTSCGSVDDANNLFDESPSRSVYPWNA 144

Query: 38  LLKGNVVRGGKR 3
           LL+GNV+ GG+R
Sbjct: 145 LLRGNVISGGRR 156



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
 Frame = -3

Query: 365 KNPHAICKD--IQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGR 192
           K  +AIC    I      G+L +AL  + ++Q  GI  ++ T A ++  C+  +AL  G+
Sbjct: 340 KERNAICWTALISGYVANGRLEQALRSIIWMQQEGIRPDVVTVATVVPICAELRALKPGK 399

Query: 191 QVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNV 21
           ++H +   +    N  ++  L+ MY+ CG  D + RLF  +  R V  W A++   V
Sbjct: 400 EIHAYAVKNCFLPNVSIVSSLMMMYSKCGVLDYSVRLFEGMEQRNVILWTAMIDSYV 456



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
 Frame = -3

Query: 296 AILDYLQHR--GIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQ 123
           A+  Y Q R  GI +N+ +F++++ + +   AL  G + H  L  +GL G+  L   L+ 
Sbjct: 160 ALSTYYQMRALGIEMNVYSFSSVIKSLAGASALLQGLKTHALLIKNGLVGSAMLRTSLID 219

Query: 122 MYATCGSPDDARRLFSELSPRTVYTWNALLKG 27
           MY  CG    AR++F E+  R +  W A++ G
Sbjct: 220 MYFKCGKIKLARQVFEEIVERDIVAWGAMISG 251


>ref|XP_002275897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Vitis vinifera]
          Length = 725

 Score =  170 bits (430), Expect = 2e-40
 Identities = 81/129 (62%), Positives = 100/129 (77%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH+KNPHAI  DIQR AR G+L +AL ILDY   +GIPVN TTF++LL AC 
Sbjct: 103 DAFPMSLPLHTKNPHAIFSDIQRFARQGKLKEALTILDYCDQQGIPVNPTTFSSLLRACV 162

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
             K+L  G+Q+HVH+R +GLE NEFL  KLV MY +CGS +DAR +F  +S ++VYTWNA
Sbjct: 163 ESKSLTHGKQIHVHIRINGLENNEFLRTKLVHMYTSCGSLEDARGVFDGVSSKSVYTWNA 222

Query: 38  LLKGNVVRG 12
           LL+GNV+ G
Sbjct: 223 LLRGNVISG 231



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/102 (29%), Positives = 55/102 (53%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+L +AL  + ++Q  G   ++ T A +L  C+  +AL  G+++H +   +G   N  + 
Sbjct: 436 GRLDQALRSIAWMQQEGFRPDVVTVATVLPVCAELRALRQGKEIHSYAVKNGFLPNVSIA 495

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
             L+ MY+ CG+ D + +LF  +  R V +W A++   V  G
Sbjct: 496 TSLMVMYSKCGNLDYSFKLFDGMDARNVISWTAMIDSYVENG 537


>ref|XP_006390769.1| hypothetical protein EUTSA_v10019712mg [Eutrema salsugineum]
           gi|557087203|gb|ESQ28055.1| hypothetical protein
           EUTSA_v10019712mg [Eutrema salsugineum]
          Length = 688

 Score =  169 bits (427), Expect = 5e-40
 Identities = 81/132 (61%), Positives = 100/132 (75%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLHSKNP+ I +DIQ  AR  +L  AL ILDYL+ RGIPVN TTF+ALL+AC 
Sbjct: 62  DAFPSSLPLHSKNPYIIHRDIQNFARQNKLEDALTILDYLEQRGIPVNATTFSALLAACV 121

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K+L+ G+QVHVH+R +GLE NEFL  KLV MY  CGS  DA+++F E +   VY+WNA
Sbjct: 122 RRKSLSLGKQVHVHIRINGLENNEFLGTKLVHMYTACGSIKDAQKVFDESTSSNVYSWNA 181

Query: 38  LLKGNVVRGGKR 3
           LL+G V+ G +R
Sbjct: 182 LLRGTVISGKRR 193



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/105 (28%), Positives = 54/105 (51%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+  +AL  + ++Q  G   ++ T A +L  C+  +A+  G+++H +   +    N  L+
Sbjct: 396 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAVKQGKEIHCYALKNLFLPNVSLV 455

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRGGKR 3
             L+ +Y+ CG P+   RLF +L  R V  W A++   V  G  R
Sbjct: 456 TSLMVLYSKCGVPEYPVRLFDKLEHRNVKAWTAMIDCYVENGDLR 500


>ref|XP_006301077.1| hypothetical protein CARUB_v10021470mg [Capsella rubella]
           gi|482569787|gb|EOA33975.1| hypothetical protein
           CARUB_v10021470mg [Capsella rubella]
          Length = 688

 Score =  168 bits (425), Expect = 8e-40
 Identities = 82/132 (62%), Positives = 98/132 (74%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLHSKNP +I +DIQ  AR   L  AL ILDYL+ RGIPVN TTF+ALL+AC 
Sbjct: 62  DAFPSSLPLHSKNPCSIHRDIQSFARKNNLEDALTILDYLEQRGIPVNATTFSALLAACV 121

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K+L  G+QVHVH+R +GLE NEFL  KLV MY  CGS  DA+++F E +   VY+WNA
Sbjct: 122 RRKSLIHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNA 181

Query: 38  LLKGNVVRGGKR 3
           LL+G V+ G KR
Sbjct: 182 LLRGTVISGKKR 193



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 31/105 (29%), Positives = 53/105 (50%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+  +AL  + ++Q  G   ++ T A +L  C+  +A+  G+++H +   +    N  L+
Sbjct: 396 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 455

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRGGKR 3
             L+ MY+ CG P+   RLF  L  R V  W A++   V  G  R
Sbjct: 456 TSLMVMYSKCGVPEYPVRLFDRLEQRNVKAWTAMIDCYVETGDLR 500


>ref|NP_177302.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169718|sp|Q9C9I3.1|PP115_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71460, chloroplastic; Flags: Precursor
           gi|12323723|gb|AAG51819.1|AC016163_8 unknown protein;
           45757-47826 [Arabidopsis thaliana]
           gi|332197082|gb|AEE35203.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  167 bits (424), Expect = 1e-39
 Identities = 82/132 (62%), Positives = 97/132 (73%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLHSKNP+ I +DIQ  AR   L  AL ILDYL+ RGIPVN TTF+ALL AC 
Sbjct: 63  DAFPSSLPLHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACV 122

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K+L  G+QVHVH+R +GLE NEFL  KLV MY  CGS  DA+++F E +   VY+WNA
Sbjct: 123 RRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNA 182

Query: 38  LLKGNVVRGGKR 3
           LL+G V+ G KR
Sbjct: 183 LLRGTVISGKKR 194



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/95 (29%), Positives = 50/95 (52%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+  +AL  + ++Q  G   ++ T A +L  C+  +A+  G+++H +   +    N  L+
Sbjct: 397 GRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLV 456

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALL 33
             L+ MY+ CG P+   RLF  L  R V  W A++
Sbjct: 457 TSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMI 491


>ref|XP_006478380.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Citrus sinensis]
          Length = 681

 Score =  162 bits (411), Expect = 3e-38
 Identities = 78/132 (59%), Positives = 98/132 (74%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH KNP AI KDIQR AR  +L +AL ILDY+  +GIPVN+TTF AL++AC 
Sbjct: 59  DAFPSSLPLHEKNPRAIYKDIQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACV 118

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R ++L  GR +H H+R +GLE N FL  KLV+MY +CGS +DA ++F E S  +VY WNA
Sbjct: 119 RTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNA 178

Query: 38  LLKGNVVRGGKR 3
           LL+G V+ G KR
Sbjct: 179 LLRGAVIAGKKR 190



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/102 (29%), Positives = 56/102 (54%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+L +AL  + ++Q  G   ++ T A ++  CS+ KAL  G+++H +   +    N  ++
Sbjct: 392 GRLEQALRSIAWMQQEGFRPDVVTVATVIPVCSQLKALNHGKEIHAYAVKNQFLPNVSII 451

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
             L+ MY+ CG  D + +LF E+  R V +W A++   +  G
Sbjct: 452 TSLMIMYSKCGVLDYSLKLFDEMEVRNVISWTAMIDSCIENG 493


>ref|XP_002528030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532560|gb|EEF34348.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  162 bits (409), Expect = 6e-38
 Identities = 77/133 (57%), Positives = 100/133 (75%), Gaps = 1/133 (0%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH+KNP A+ KDIQR  R  +L +AL I+DYL+ +GIPVN TTF+AL++AC 
Sbjct: 67  DAFPSSLPLHTKNPSAVYKDIQRFTRQNKLKEALIIMDYLEQQGIPVNATTFSALIAACI 126

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRT-VYTWN 42
           R K+L   +Q+H H+R +GLE NEFL  KLV +Y +CGS +DA+ +F E +  T VY WN
Sbjct: 127 RSKSLDHAKQIHAHIRINGLENNEFLRTKLVSLYTSCGSFEDAKMVFGECTSSTSVYPWN 186

Query: 41  ALLKGNVVRGGKR 3
           ALL+G V+ GGKR
Sbjct: 187 ALLRGTVISGGKR 199


>ref|XP_004156247.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 716

 Score =  161 bits (408), Expect = 7e-38
 Identities = 71/129 (55%), Positives = 100/129 (77%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH+KNPHAI +D+QR AR  +L +AL I+DY+  +GIPVN TTF++L++AC 
Sbjct: 66  DAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACV 125

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K++ + +Q+H H+R +GLE NEF+  +LV MY  CGS ++A++LF E S ++VY WNA
Sbjct: 126 RTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNA 185

Query: 38  LLKGNVVRG 12
           LL+G V+ G
Sbjct: 186 LLRGTVMAG 194



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/95 (28%), Positives = 52/95 (54%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+L +A+  + ++Q  G   +I T A +L  C++ +AL  G+++H +   +    N  ++
Sbjct: 399 GRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIV 458

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALL 33
             L+ MY+ CG  D   +LF+ +  R V  W A++
Sbjct: 459 SSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMI 493


>ref|XP_004141633.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cucumis sativus]
          Length = 696

 Score =  161 bits (408), Expect = 7e-38
 Identities = 71/129 (55%), Positives = 100/129 (77%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH+KNPHAI +D+QR AR  +L +AL I+DY+  +GIPVN TTF++L++AC 
Sbjct: 66  DAFPSSLPLHTKNPHAIYEDVQRFARQNKLKEALTIMDYVDQQGIPVNATTFSSLITACV 125

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K++ + +Q+H H+R +GLE NEF+  +LV MY  CGS ++A++LF E S ++VY WNA
Sbjct: 126 RTKSMTYAKQIHAHIRINGLENNEFIRTRLVHMYTACGSLEEAQKLFDESSSKSVYPWNA 185

Query: 38  LLKGNVVRG 12
           LL+G V+ G
Sbjct: 186 LLRGTVMAG 194



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/95 (28%), Positives = 52/95 (54%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+L +A+  + ++Q  G   +I T A +L  C++ +AL  G+++H +   +    N  ++
Sbjct: 399 GRLEQAVRSVIWMQQEGFRPDIVTVATILPVCAQLRALRPGKEIHAYAMKNCFLPNVSIV 458

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALL 33
             L+ MY+ CG  D   +LF+ +  R V  W A++
Sbjct: 459 SSLMVMYSKCGVMDYTLKLFNGMEQRNVILWTAMI 493


>ref|XP_003604235.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355505290|gb|AES86432.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 688

 Score =  159 bits (403), Expect = 3e-37
 Identities = 78/133 (58%), Positives = 102/133 (76%), Gaps = 1/133 (0%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH+KNP +I KDI+  AR  +L++ALAILDY+   GIPVN TTF++L++AC 
Sbjct: 63  DAFPCSLPLHNKNPISIYKDIKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACI 122

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSEL-SPRTVYTWN 42
           R  +L+ G+Q+H H+R +GLE N FLL KLVQMY +CGS +DA +LF EL    +VY WN
Sbjct: 123 RTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQMYTSCGSLEDALKLFDELPDESSVYPWN 182

Query: 41  ALLKGNVVRGGKR 3
           ALL+G VV GG++
Sbjct: 183 ALLRGTVVFGGRK 195



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 33/105 (31%), Positives = 57/105 (54%)
 Frame = -3

Query: 326 ARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNE 147
           A +G+L +AL  + ++Q  G   ++ T A +L  C++ +AL  G+Q+H +   H    N 
Sbjct: 398 ASVGRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNV 457

Query: 146 FLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
            L   LV MY+ CG  + + RLF ++  R V +W A++   +  G
Sbjct: 458 SLSSSLVVMYSKCGVVEYSTRLFGDMEQRNVISWTAMIDSYIENG 502


>ref|XP_002325518.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550317217|gb|EEE99899.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 678

 Score =  157 bits (398), Expect = 1e-36
 Identities = 77/133 (57%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH KNP AI KDIQR +R  QL  AL I+DY+  +GIPVN TTF+AL++AC 
Sbjct: 55  DAFPASLPLHKKNPQAIYKDIQRFSRKNQLKDALIIMDYMDQQGIPVNPTTFSALIAACI 114

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSE-LSPRTVYTWN 42
           R K+L   +++H HLR +GL+ NEFL  KLV MY +CGS +DA+ +F E  S  TVY WN
Sbjct: 115 RSKSLTKAKEIHTHLRINGLQNNEFLRTKLVHMYTSCGSIEDAKSVFDECTSTATVYPWN 174

Query: 41  ALLKGNVVRGGKR 3
           AL++G V+ G KR
Sbjct: 175 ALIRGTVISGKKR 187



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/115 (26%), Positives = 58/115 (50%)
 Frame = -3

Query: 374 LHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFG 195
           + ++N  A    I      G +++A  +  ++Q      +  T A +LS CS+ K L FG
Sbjct: 471 MEARNVIAWTAMIDSYVENGCINEAFNVFRFMQWSKHRPDSVTMARMLSICSKIKTLKFG 530

Query: 194 RQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLK 30
           +++H H+     E   F+  +LV+MY +CG    A  +F+ +  +   TW A+++
Sbjct: 531 KEIHGHILKKDFESIPFVSSELVKMYGSCGLVHSAESVFNAVPVKGSMTWTAIIE 585



 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/102 (28%), Positives = 51/102 (50%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+L +AL  + ++Q  G   ++ T A ++  C++ K L  G+++H          N  L 
Sbjct: 389 GRLEQALRSVVWMQQEGCRPDVVTVATVIPVCAKLKTLKHGKEIHAFSVKKLFLPNVSLT 448

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
             L++MY+ CG  D + +LF  +  R V  W A++   V  G
Sbjct: 449 TSLIKMYSKCGVLDYSVKLFDGMEARNVIAWTAMIDSYVENG 490


>ref|XP_004507080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Cicer arietinum]
          Length = 694

 Score =  156 bits (394), Expect = 3e-36
 Identities = 79/134 (58%), Positives = 100/134 (74%), Gaps = 2/134 (1%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH+KNP  I KDI+  AR  +L +AL ILDY+  +GIPVN TTF++L++AC 
Sbjct: 68  DAFPCSLPLHNKNPLFIYKDIKNFARQNKLKEALTILDYVDQQGIPVNATTFSSLIAACI 127

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSE--LSPRTVYTW 45
           R  +L+ GRQVH H+R +GL+ N FL  KLVQMY +CGS +DA +LF E   S  +VY W
Sbjct: 128 RTNSLSIGRQVHTHIRINGLQNNLFLKTKLVQMYTSCGSFEDAVKLFDESFQSESSVYPW 187

Query: 44  NALLKGNVVRGGKR 3
           NALL+G+VV GGKR
Sbjct: 188 NALLRGSVVSGGKR 201



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 30/105 (28%), Positives = 55/105 (52%)
 Frame = -3

Query: 326 ARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNE 147
           A +G+L +AL  + ++Q  G   ++ T A +L  C++ +AL  G+Q+H +   H    N 
Sbjct: 404 ASVGRLEQALRSIIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNV 463

Query: 146 FLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
            +   L+ MY+ CG  + +  LF +   R V +W A++   +  G
Sbjct: 464 SVTSSLMVMYSKCGVVEYSATLFDDTEQRNVISWTAMIDSYIENG 508


>ref|XP_004308527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 683

 Score =  156 bits (394), Expect = 3e-36
 Identities = 74/132 (56%), Positives = 99/132 (75%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP+SLPLH+KNP A+ KDIQR A   +L++AL ILDYL  +GIPVN TTF+ L++AC 
Sbjct: 61  DAFPESLPLHTKNPRAVYKDIQRFAAQNKLNEALTILDYLDQQGIPVNATTFSHLITACV 120

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R ++L  G+++H ++  +GLE +EFL  KLV MY + G+ DDA  LF ++  + VYTWNA
Sbjct: 121 RTRSLDTGKKIHKYIWINGLESSEFLRQKLVNMYTSFGAVDDAHHLFDQMPGKNVYTWNA 180

Query: 38  LLKGNVVRGGKR 3
           LL+G VV GGKR
Sbjct: 181 LLRGTVVAGGKR 192



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/102 (30%), Positives = 52/102 (50%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+L +AL  + ++Q  G   ++ T A  L  C+  K L  G+++H +   +    N  ++
Sbjct: 394 GRLEQALRSVIWMQQEGFKPDVVTVATALPVCAELKDLKRGKEIHAYAVKNCFLPNVSIV 453

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
             L+ MY+ CG  D + RLF  +  R V TW A++   V  G
Sbjct: 454 SSLMVMYSKCGVLDYSIRLFDGMEQRNVITWTAMIDSLVENG 495


>gb|ESW11652.1| hypothetical protein PHAVU_008G048400g [Phaseolus vulgaris]
          Length = 674

 Score =  155 bits (392), Expect = 5e-36
 Identities = 76/132 (57%), Positives = 100/132 (75%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH+KNP  I KDI+R AR  +L +AL ILDY+  RGIPV+ TTF+A+++AC 
Sbjct: 57  DAFPCSLPLHNKNPIFIYKDIKRFARQNKLKEALTILDYVDQRGIPVDSTTFSAVIAACI 116

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K+L  GR+VH+H+R +GLE N FL  KLVQMY +CGS ++A++LF  L   +VY WNA
Sbjct: 117 RTKSLPQGREVHIHIRINGLENNVFLRTKLVQMYTSCGSLEEAQKLFEGLPCESVYPWNA 176

Query: 38  LLKGNVVRGGKR 3
           LL+G VV G ++
Sbjct: 177 LLRGTVVSGERQ 188



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 32/102 (31%), Positives = 55/102 (53%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+L +AL    ++Q  G   ++ T A +L  C++ +AL  GRQ+H +   H    N  + 
Sbjct: 390 GKLEQALRSTIWMQQEGFRPDVVTVATVLPVCAQLRALEQGRQIHAYALKHWFLPNVSIT 449

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
            +L+ MY+ CG  + +RRLF  +  R V +W A++   +  G
Sbjct: 450 SQLMMMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSFINNG 491


>ref|XP_004243456.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Solanum lycopersicum]
          Length = 674

 Score =  154 bits (389), Expect = 1e-35
 Identities = 74/126 (58%), Positives = 95/126 (75%)
 Frame = -3

Query: 380 LPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALA 201
           L +H+KNPHAI KDIQR A   +L +AL ILDYL HRGIPVN TTFA+L++AC R K+L 
Sbjct: 58  LSVHTKNPHAIYKDIQRFAHQNKLKEALTILDYLDHRGIPVNPTTFASLIAACVRLKSLT 117

Query: 200 FGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNV 21
             + VH H+  +GLE NEFL  K+V MYA CGS +DA+++F ++  R+VY WNALL+GNV
Sbjct: 118 SAKIVHTHVIINGLENNEFLQTKVVNMYAACGSIEDAKKVFDKMPVRSVYPWNALLRGNV 177

Query: 20  VRGGKR 3
           V GG +
Sbjct: 178 VLGGSK 183



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/102 (27%), Positives = 54/102 (52%)
 Frame = -3

Query: 317 GQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNEFLL 138
           G+L +AL  + ++Q  G   ++ T A +L  C + K L +G+++H +   +G   N  + 
Sbjct: 385 GRLEQALRSILWMQQEGFKPDLVTVATVLPVCGKLKELKYGKEIHAYAVKNGFLPNTSVS 444

Query: 137 GKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
             L+ MY+ CG    + R+F  ++ R V +W A++   +  G
Sbjct: 445 TCLMMMYSKCGLLQYSSRVFDSMAKRNVISWTAMMDSYIDSG 486


>ref|XP_003534476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71460,
           chloroplastic-like [Glycine max]
          Length = 682

 Score =  154 bits (389), Expect = 1e-35
 Identities = 75/132 (56%), Positives = 97/132 (73%)
 Frame = -3

Query: 398 DAFPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACS 219
           DAFP SLPLH+KNP  I KDI+R AR  +L +AL ILDY+  RGIPV+ TTF+++++AC 
Sbjct: 65  DAFPSSLPLHNKNPIFIFKDIKRFARQNKLKEALTILDYVDQRGIPVDATTFSSVVAACI 124

Query: 218 RHKALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNA 39
           R K+L  GR+VH H+R +GLE N FL  KLV MY  CGS +DA++LF  L   +VY WNA
Sbjct: 125 RAKSLPQGREVHTHIRINGLENNSFLRTKLVHMYTACGSLEDAQKLFDGLPCESVYPWNA 184

Query: 38  LLKGNVVRGGKR 3
           LL+G VV G ++
Sbjct: 185 LLRGTVVSGKRQ 196



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
 Frame = -3

Query: 368 SKNPHAICKD--IQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFG 195
           SK  + +C    +   A  G+L +AL    ++Q  G   ++ T A +L  C++ +AL  G
Sbjct: 379 SKERNVVCWTALMSGYAANGKLEQALRSTIWMQQEGFRPDVVTLATVLPVCAQLRALEQG 438

Query: 194 RQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVR 15
           +Q+H +   H    N  +   L+ MY+ CG  + +RRLF  +  R V +W A++   +  
Sbjct: 439 KQIHAYALKHWFLPNVSVASSLMTMYSKCGVVEYSRRLFDNMEQRNVISWTAMIDSYIEN 498

Query: 14  G 12
           G
Sbjct: 499 G 499


>ref|XP_006854875.1| hypothetical protein AMTR_s00182p00046810 [Amborella trichopoda]
           gi|548858580|gb|ERN16342.1| hypothetical protein
           AMTR_s00182p00046810 [Amborella trichopoda]
          Length = 752

 Score =  143 bits (361), Expect = 2e-32
 Identities = 72/129 (55%), Positives = 90/129 (69%)
 Frame = -3

Query: 389 PDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHK 210
           P SLPLHSKNP  I KDI+ L+R  +L +AL +LDY    GIP+N T F++L++AC+  K
Sbjct: 132 PRSLPLHSKNPTTIYKDIKTLSRKQKLKQALTVLDYATKFGIPINPTAFSSLITACTMAK 191

Query: 209 ALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLK 30
            L  GR  H HLR  GL  NEFL  +LV+MYA CG+P+DAR L S L   T + WNALL+
Sbjct: 192 DLQAGRHAHAHLRASGLADNEFLRVRLVRMYAACGAPEDARTLLSLLPLSTPHAWNALLR 251

Query: 29  GNVVRGGKR 3
           G VVRGG+R
Sbjct: 252 GAVVRGGRR 260


>gb|EPS73900.1| hypothetical protein M569_00856 [Genlisea aurea]
          Length = 680

 Score =  134 bits (336), Expect = 2e-29
 Identities = 60/127 (47%), Positives = 86/127 (67%)
 Frame = -3

Query: 392 FPDSLPLHSKNPHAICKDIQRLARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRH 213
           F  ++ +H KNPH I ++IQR A    L KA  +LDYL+   +PVN+TTF +L+SAC R 
Sbjct: 55  FSSAMSIHKKNPHIIYREIQRFASQNNLRKAFILLDYLERNAVPVNVTTFVSLISACIRL 114

Query: 212 KALAFGRQVHVHLRTHGLEGNEFLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALL 33
           K++   +QVH H+  +GL  NEFL  +LV +YA CGS +DA+ +F  +  ++VY WNALL
Sbjct: 115 KSVDAAKQVHSHIAKNGLSKNEFLCTRLVHLYACCGSVEDAKGVFESMPAKSVYPWNALL 174

Query: 32  KGNVVRG 12
           +G V+ G
Sbjct: 175 RGKVMMG 181



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 30/105 (28%), Positives = 54/105 (51%)
 Frame = -3

Query: 326 ARLGQLHKALAILDYLQHRGIPVNITTFAALLSACSRHKALAFGRQVHVHLRTHGLEGNE 147
           A  G   +AL  + ++Q  G   +  T A  +  CS  +AL  GR++H +   +G   + 
Sbjct: 385 ASSGSFEQALRSIIWMQRDGFRPDTVTVATAIPVCSELRALNPGREIHAYALRNGCLPSV 444

Query: 146 FLLGKLVQMYATCGSPDDARRLFSELSPRTVYTWNALLKGNVVRG 12
            +   L+ MY+ CG  D + RLF ++  + V  W A+++ ++ RG
Sbjct: 445 SISTSLMVMYSRCGKWDCSSRLFGKMERKNVIAWTAMIECSIERG 489