BLASTX nr result
ID: Zingiber24_contig00039236
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00039236
(387 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 229 2e-58
tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family... 223 3e-56
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 223 3e-56
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 222 5e-56
gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japo... 218 5e-55
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 218 5e-55
emb|CBI16226.3| unnamed protein product [Vitis vinifera] 214 1e-53
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 214 1e-53
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 209 4e-52
gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus offic... 209 4e-52
gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba] 204 8e-51
gb|AAS79694.1| RNA polymerase III large subunit [Pinus nigra] 204 1e-50
gb|ACJ63309.1| RNA polymerase III large subunit [Illicium parvif... 204 1e-50
gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta] 202 5e-50
gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mir... 202 5e-50
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 201 6e-50
gb|AAS79693.1| RNA polymerase III large subunit [Podocarpus macr... 201 6e-50
gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata] 201 1e-49
gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tu... 200 1e-49
gb|AAS79691.1| RNA polymerase III large subunit [Thuja occidenta... 200 2e-49
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 229 bits (585), Expect = 2e-58
Identities = 108/128 (84%), Positives = 119/128 (92%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAASC NRLAK SAR+IGNHGFSIG+DDVQPG+ LN+QKKKKID+GY++C+DLI
Sbjct: 673 RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKKIDEGYKQCHDLI 732
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
SL++KG L LHPGCNAAQTLE KIT VLNEIRT AGNVCM+ LHWRNSPLIMSQCGSKGS
Sbjct: 733 SLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGNVCMDTLHWRNSPLIMSQCGSKGS 792
Query: 25 PINISQMV 2
PINISQMV
Sbjct: 793 PINISQMV 800
>tpg|DAA37181.1| TPA: putative DNA-directed RNA polymerase family protein [Zea mays]
Length = 1030
Score = 223 bits (567), Expect = 3e-56
Identities = 105/128 (82%), Positives = 117/128 (91%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAASC NRLAK SAR+IGNHGFSIG+DDVQPG+ LN+QKKK+ID GY++C+DLI
Sbjct: 670 RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEIDGGYKKCHDLI 729
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
SL++KG L LHPGCNAAQTLE IT VLNEIR+ AGNVCM+ LHWRNSPLIMSQCGSKGS
Sbjct: 730 SLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLIMSQCGSKGS 789
Query: 25 PINISQMV 2
PINISQMV
Sbjct: 790 PINISQMV 797
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 223 bits (567), Expect = 3e-56
Identities = 105/128 (82%), Positives = 117/128 (91%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAASC NRLAK SAR+IGNHGFSIG+DDVQPG+ LN+QKKK+ID GY++C+DLI
Sbjct: 667 RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNRQKKKEIDGGYKKCHDLI 726
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
SL++KG L LHPGCNAAQTLE IT VLNEIR+ AGNVCM+ LHWRNSPLIMSQCGSKGS
Sbjct: 727 SLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTLHWRNSPLIMSQCGSKGS 786
Query: 25 PINISQMV 2
PINISQMV
Sbjct: 787 PINISQMV 794
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 222 bits (565), Expect = 5e-56
Identities = 104/128 (81%), Positives = 117/128 (91%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAASC NRLAK SAR+IGNHGFSIG+DDV+PG+ L+QQKKKKID+GY+EC+DLI
Sbjct: 654 RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEGYKECHDLI 713
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
+ +SKG LTL PGCNAAQTLE KIT VLN+IR AGN+CM+ LHWRNSPLIMSQCGSKGS
Sbjct: 714 TSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIMSQCGSKGS 773
Query: 25 PINISQMV 2
PINISQMV
Sbjct: 774 PINISQMV 781
>gb|EEE61245.1| hypothetical protein OsJ_15297 [Oryza sativa Japonica Group]
Length = 1321
Score = 218 bits (556), Expect = 5e-55
Identities = 104/128 (81%), Positives = 112/128 (87%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAASC NRLAK SAR+IGNHGFSIG+DDVQPG+ LNQ+KK KID GY++C+DLI
Sbjct: 598 RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDLI 657
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
+ YSKG L L PGCNAAQTLE IT VLNEIR AG VCMN LHWRNSPLIMSQCGSKGS
Sbjct: 658 ASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGS 717
Query: 25 PINISQMV 2
PINISQMV
Sbjct: 718 PINISQMV 725
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 218 bits (556), Expect = 5e-55
Identities = 104/128 (81%), Positives = 112/128 (87%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAASC NRLAK SAR+IGNHGFSIG+DDVQPG+ LNQ+KK KID GY++C+DLI
Sbjct: 660 RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDLI 719
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
+ YSKG L L PGCNAAQTLE IT VLNEIR AG VCMN LHWRNSPLIMSQCGSKGS
Sbjct: 720 ASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGS 779
Query: 25 PINISQMV 2
PINISQMV
Sbjct: 780 PINISQMV 787
>emb|CBI16226.3| unnamed protein product [Vitis vinifera]
Length = 1819
Score = 214 bits (545), Expect = 1e-53
Identities = 100/128 (78%), Positives = 111/128 (86%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYN+HAAA+C NRLAKLSARWIGNHGFSIGIDDVQPG LN QK K+I++GY C++LI
Sbjct: 666 RDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELI 725
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
Y+KGKL L PGCNAAQTLE +IT VLN+IR T NVCM ELHWRNSPLIMSQCGSKGS
Sbjct: 726 QQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGS 785
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 786 PINISQMI 793
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 214 bits (545), Expect = 1e-53
Identities = 100/128 (78%), Positives = 111/128 (86%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYN+HAAA+C NRLAKLSARWIGNHGFSIGIDDVQPG LN QK K+I++GY C++LI
Sbjct: 666 RDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELI 725
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
Y+KGKL L PGCNAAQTLE +IT VLN+IR T NVCM ELHWRNSPLIMSQCGSKGS
Sbjct: 726 QQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWRNSPLIMSQCGSKGS 785
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 786 PINISQMI 793
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 209 bits (531), Expect = 4e-52
Identities = 98/130 (75%), Positives = 112/130 (86%), Gaps = 2/130 (1%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAASC NRLAK SAR+IGNHGFSIG+DDVQPG+ LNQ+KKK ID GY EC+DLI
Sbjct: 665 RDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGESLNQKKKKTIDQGYTECHDLI 724
Query: 205 SLYSKGK--LTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSK 32
++YSKG LHPGCN AQTLE++++ +LN++R AG CMN LHWRNSPLIMSQCGSK
Sbjct: 725 AVYSKGAPGAELHPGCNRAQTLEVRVSAILNQLREKAGEHCMNTLHWRNSPLIMSQCGSK 784
Query: 31 GSPINISQMV 2
GSPINISQMV
Sbjct: 785 GSPINISQMV 794
>gb|ACJ63307.1| RNA polymerase III large subunit [Asparagus officinalis]
Length = 544
Score = 209 bits (531), Expect = 4e-52
Identities = 101/128 (78%), Positives = 107/128 (83%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNS AASC NRLAKLSARWIGNHGFSIGIDDVQPG+ LNQQKK IDDGY C I
Sbjct: 160 RDYNSDVAASCMNRLAKLSARWIGNHGFSIGIDDVQPGERLNQQKKMTIDDGYGRCISFI 219
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
LY KL L PG NAA+TLE++ITEVLNEIR TAG+VCM ELHWRNSPLIMSQCGSKGS
Sbjct: 220 ELYENRKLKLRPGANAAETLEVEITEVLNEIRKTAGDVCMKELHWRNSPLIMSQCGSKGS 279
Query: 25 PINISQMV 2
INISQM+
Sbjct: 280 AINISQMI 287
>gb|AAS79697.1| RNA polymerase III large subunit [Ginkgo biloba]
Length = 548
Score = 204 bits (520), Expect = 8e-51
Identities = 97/128 (75%), Positives = 111/128 (86%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYN+HAAASC NRLAKLSARWIGNHGFSIGIDDVQPG L+ +K+++I +GY +C I
Sbjct: 162 RDYNTHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGSRLSAKKEQRIREGYSKCDMHI 221
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
LY+KGKLTL PGCNAAQTLE +IT LN+IR AG+VC+ ELHWRNSPLIMSQCGSKGS
Sbjct: 222 DLYNKGKLTLQPGCNAAQTLEAEITGELNKIREVAGSVCLKELHWRNSPLIMSQCGSKGS 281
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 282 PINISQMI 289
>gb|AAS79694.1| RNA polymerase III large subunit [Pinus nigra]
Length = 548
Score = 204 bits (518), Expect = 1e-50
Identities = 97/128 (75%), Positives = 110/128 (85%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYN+HAAASC NRLAKLSARWIGNHGFSIGIDDVQPG L QK+++I +GY +C I
Sbjct: 162 RDYNTHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAQKEERIREGYNKCDMHI 221
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
LY+KGKLTL PGCN+AQTLE +IT LN+IR AG+VC+ ELHWRNSPLIMSQCGSKGS
Sbjct: 222 DLYNKGKLTLQPGCNSAQTLEAEITGELNKIREIAGSVCLRELHWRNSPLIMSQCGSKGS 281
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 282 PINISQMI 289
>gb|ACJ63309.1| RNA polymerase III large subunit [Illicium parviflorum]
Length = 546
Score = 204 bits (518), Expect = 1e-50
Identities = 97/128 (75%), Positives = 110/128 (85%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYN+HAAASC NRLAKLSARWIGNHGFSIGIDDVQPG L QK+++I +GY +C I
Sbjct: 160 RDYNTHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLTAQKEERIREGYNKCDMHI 219
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
LY+KGKLTL PGCN+AQTLE +IT LN+IR AG+VC+ ELHWRNSPLIMSQCGSKGS
Sbjct: 220 DLYNKGKLTLQPGCNSAQTLEAEITGELNKIREIAGSVCLRELHWRNSPLIMSQCGSKGS 279
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 280 PINISQMI 287
>gb|AAS79695.1| RNA polymerase III large subunit [Cycas revoluta]
Length = 548
Score = 202 bits (513), Expect = 5e-50
Identities = 97/128 (75%), Positives = 110/128 (85%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYN+HAAAS NRLAKLSARWIGNHGFSIGIDDVQPG L+ QK+++I +GY +C I
Sbjct: 162 RDYNTHAAASSMNRLAKLSARWIGNHGFSIGIDDVQPGTRLSAQKEERIKEGYSKCDMHI 221
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
LY+KGKLTL PGCNAAQTLE +IT LN+IR AG+VC+ ELHWRNSPLIMSQCGSKGS
Sbjct: 222 DLYNKGKLTLQPGCNAAQTLEAEITGELNKIREIAGSVCLKELHWRNSPLIMSQCGSKGS 281
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 282 PINISQMI 289
>gb|AAS79689.1| RNA polymerase III large subunit [Welwitschia mirabilis]
Length = 548
Score = 202 bits (513), Expect = 5e-50
Identities = 96/128 (75%), Positives = 111/128 (86%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYN++AAASC NRLAKLSARWIGNHGFSIGIDDVQPG L+ QK+++I +GY +C I
Sbjct: 162 RDYNAYAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGARLSSQKEERIKEGYSKCGMHI 221
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
LY+KGKL+L PGCNAAQTLE +IT LN+IR AG+VC+ ELHWRNSPLIMSQCGSKGS
Sbjct: 222 DLYNKGKLSLQPGCNAAQTLEAEITGELNKIREIAGSVCLKELHWRNSPLIMSQCGSKGS 281
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 282 PINISQMI 289
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 201 bits (512), Expect = 6e-50
Identities = 97/128 (75%), Positives = 104/128 (81%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAASC NRLAKLSARWIGNHGFSIGIDDV PG L +QK+++I GY C I
Sbjct: 660 RDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYSNCDAFI 719
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
Y KGKL+L PGCNAAQTLE +IT VLN IR A VCM ELHWRNSPLIMSQCGSKGS
Sbjct: 720 DAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQCGSKGS 779
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 780 PINISQMI 787
>gb|AAS79693.1| RNA polymerase III large subunit [Podocarpus macrophyllus]
Length = 546
Score = 201 bits (512), Expect = 6e-50
Identities = 96/128 (75%), Positives = 110/128 (85%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAASC NRLAKLSARWIGNHGFSIGIDDVQPG L+ +K+++I +GY +C I
Sbjct: 162 RDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGTRLSAKKEEQIREGYSKCDMHI 221
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
LY+KGKLTL PGCNAAQTLE +IT LN+IR AG++C+ ELHWRNSPLIMS CGSKGS
Sbjct: 222 DLYNKGKLTLQPGCNAAQTLESEITGELNKIREVAGSICLRELHWRNSPLIMSLCGSKGS 281
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 282 PINISQMI 289
>gb|AAS79696.1| RNA polymerase III large subunit [Zamia muricata]
Length = 548
Score = 201 bits (510), Expect = 1e-49
Identities = 96/128 (75%), Positives = 110/128 (85%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYN+HAAAS NRLAKLSARWIGNHGFSIGIDDVQPG L+ +K+++I +GY +C I
Sbjct: 162 RDYNTHAAASSMNRLAKLSARWIGNHGFSIGIDDVQPGTRLSAKKEERIKEGYSKCDMHI 221
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
LY+KGKLTL PGCNAAQTLE +IT LN+IR AG+VC+ ELHWRNSPLIMSQCGSKGS
Sbjct: 222 DLYNKGKLTLQPGCNAAQTLEAEITGELNKIREVAGSVCLKELHWRNSPLIMSQCGSKGS 281
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 282 PINISQMI 289
>gb|ACJ63310.1| RNA polymerase III large subunit [Liriodendron tulipifera]
Length = 546
Score = 200 bits (509), Expect = 1e-49
Identities = 97/128 (75%), Positives = 106/128 (82%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDY +HAAASC NRLAKLSARWIGNHGFSIGIDDVQPG+ LN+ KK +I+ GY+EC DLI
Sbjct: 162 RDYGAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGEHLNRNKKLEIEKGYKECDDLI 221
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
+ Y+ G L L PGCNAAQTLE IT LN+IR A VCM LHWRNSPLIMSQCGSKGS
Sbjct: 222 NRYNTGGLKLLPGCNAAQTLESNITGKLNDIREAAAKVCMASLHWRNSPLIMSQCGSKGS 281
Query: 25 PINISQMV 2
PINISQMV
Sbjct: 282 PINISQMV 289
>gb|AAS79691.1| RNA polymerase III large subunit [Thuja occidentalis]
Length = 546
Score = 200 bits (508), Expect = 2e-49
Identities = 95/128 (74%), Positives = 109/128 (85%)
Frame = -3
Query: 385 RDYNSHAAASCKNRLAKLSARWIGNHGFSIGIDDVQPGDDLNQQKKKKIDDGYRECYDLI 206
RDYNSHAAA C NRLAKLSARWIGNHGFSIGIDDVQPG L+ +K+++I +GY +C I
Sbjct: 162 RDYNSHAAACCMNRLAKLSARWIGNHGFSIGIDDVQPGTRLSAKKEEQIREGYSKCDMHI 221
Query: 205 SLYSKGKLTLHPGCNAAQTLELKITEVLNEIRTTAGNVCMNELHWRNSPLIMSQCGSKGS 26
LY+KGKLTL PGCNAAQTLE +I+ VLN IR AG++C+ ELHWRNSPLIMS CGSKGS
Sbjct: 222 DLYNKGKLTLQPGCNAAQTLEAEISGVLNRIREIAGSICLKELHWRNSPLIMSLCGSKGS 281
Query: 25 PINISQMV 2
PINISQM+
Sbjct: 282 PINISQMI 289