BLASTX nr result
ID: Zingiber24_contig00039198
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00039198
(939 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [A... 265 2e-68
ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II tra... 260 6e-67
gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, ... 260 6e-67
ref|XP_004980099.1| PREDICTED: mediator of RNA polymerase II tra... 258 3e-66
ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like... 257 4e-66
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like... 250 5e-64
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra... 250 6e-64
emb|CBI29242.3| unnamed protein product [Vitis vinifera] 248 2e-63
ref|NP_001168975.1| uncharacterized protein LOC100382802 [Zea ma... 248 2e-63
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun... 248 3e-63
ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II tra... 247 4e-63
gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [... 246 1e-62
gb|EMT10122.1| ATP-dependent DNA helicase Q1 [Aegilops tauschii] 243 1e-61
gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus... 239 1e-60
ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II tra... 234 4e-59
ref|XP_002304389.1| DNA helicase family protein [Populus trichoc... 234 4e-59
ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote... 232 1e-58
ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II tra... 229 1e-57
ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II tra... 229 1e-57
ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II tra... 228 3e-57
>ref|XP_006854226.1| hypothetical protein AMTR_s00048p00224070 [Amborella trichopoda]
gi|548857895|gb|ERN15693.1| hypothetical protein
AMTR_s00048p00224070 [Amborella trichopoda]
Length = 713
Score = 265 bits (676), Expect = 2e-68
Identities = 141/265 (53%), Positives = 181/265 (68%), Gaps = 5/265 (1%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFF HF EP +DCNGMCDNCAH TE KE+DAS AK+IVSLL E+QENDQRATMLQL
Sbjct: 451 RRNAFFHHFGEPLQDCNGMCDNCAHPTETKEVDASTQAKIIVSLLKEMQENDQRATMLQL 510
Query: 758 VERFKVKIRELGTSSPA-PDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLW 582
V++ KV R G ++P PDLK+EE+EQ+IVQL+LD VLKEEFQHTAY+TN+Y+ +G LW
Sbjct: 511 VDKLKVNSRGSGGATPTIPDLKREELEQLIVQLVLDRVLKEEFQHTAYSTNAYVTIGPLW 570
Query: 581 KLVSQGKKQVILEISTRQHAIGMPKNAKRTRMSQXXXXXXXXXXXXXXSNT---GVLPHA 411
K + QGKK V LEIS G N K + ++ G+ PHA
Sbjct: 571 KQLVQGKKMVKLEISVNSR--GSRTNIKAVKCKHLAGLELKLDDFRKELSSCHGGIFPHA 628
Query: 410 ILSSQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKD 231
+LS+QQISTL ++P SL LEKLIGK KTEKYGERI+D I++Y+++E N G+
Sbjct: 629 VLSTQQISTLSTERPDSLEQLEKLIGKTKTEKYGERILDCIRQYVETEVPN-GSVKEGDS 687
Query: 230 TTQECSKKQKNKHVVL-VESSEDDQ 159
+K+ K K ++ +++SED+Q
Sbjct: 688 IQHRPTKRAKTKKALINIDTSEDEQ 712
>ref|XP_006355238.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum tuberosum]
Length = 706
Score = 260 bits (664), Expect = 6e-67
Identities = 139/261 (53%), Positives = 184/261 (70%), Gaps = 2/261 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFFRHFAEP ++CNGMCDNCA EV+ELD S+HAKLIVS+L ++QENDQR TMLQL
Sbjct: 453 RRSAFFRHFAEPLQECNGMCDNCAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQL 512
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
VE+ KVK + LG PDLKK+E+EQ++++L+LDHVLKEEFQHTAYATN+Y+ +G L K
Sbjct: 513 VEKLKVKQKNLG-----PDLKKDELEQLVIKLVLDHVLKEEFQHTAYATNAYVTVGPLAK 567
Query: 578 LVSQGKKQVILEISTRQ-HAIGMPKNAKRTRMSQXXXXXXXXXXXXXXSNTGVLPHAILS 402
V QG K + +E+STRQ K++KR R + + G+ PH++LS
Sbjct: 568 QVLQGNKIIKVEMSTRQSRTSSSMKSSKRERSTGLDDKLDELRKELASIHGGIFPHSVLS 627
Query: 401 SQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGN-DGATGTAKDTT 225
+QQISTL QKP S+ LEK+IGK+KTEKYG+RI++ I Y Q + DG+ T +T
Sbjct: 628 TQQISTLSGQKPKSIEELEKIIGKLKTEKYGDRILEEIVSYESDPQKDADGSKETKGNTV 687
Query: 224 QECSKKQKNKHVVLVESSEDD 162
++ K K +V++ESSED+
Sbjct: 688 KKLKTK---KALVVLESSEDE 705
>gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 707
Score = 260 bits (664), Expect = 6e-67
Identities = 138/260 (53%), Positives = 178/260 (68%), Gaps = 1/260 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RRGAFFRHF E +DCNGMCDNC E+KE+DA++H K+IVSLLH++Q NDQRAT+LQL
Sbjct: 453 RRGAFFRHFGEAAQDCNGMCDNCTSSLELKEIDATHHTKIIVSLLHDIQLNDQRATLLQL 512
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++FK K ++LG S+ + DLKKE IEQ++VQL+LD VLKEEFQHTAYATN+Y+ALG LWK
Sbjct: 513 VDKFKAKWKDLGCSNESIDLKKEGIEQLVVQLILDRVLKEEFQHTAYATNAYVALGPLWK 572
Query: 578 LVSQGKKQVILEISTRQHAIGM-PKNAKRTRMSQXXXXXXXXXXXXXXSNTGVLPHAILS 402
QG + V L ++ G K KR +MS SN GV PHA+LS
Sbjct: 573 PALQGNRPVKLSVAFHSQDKGSGSKRTKRNQMSNLEAKLDDLRRELSSSNGGVFPHAVLS 632
Query: 401 SQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTTQ 222
+QQIS L QKPT++A LEKLIGKVKT KYG II+L+ ++ SE A + +
Sbjct: 633 AQQISLLNRQKPTTVAELEKLIGKVKTGKYGSAIIELMLLHIDSEVAGGKACASKR---- 688
Query: 221 ECSKKQKNKHVVLVESSEDD 162
+K+ + V+ VESSE++
Sbjct: 689 ---QKKDKEDVICVESSEEE 705
>ref|XP_004980099.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X1 [Setaria italica]
gi|514810609|ref|XP_004980100.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 34-like isoform
X2 [Setaria italica]
Length = 712
Score = 258 bits (658), Expect = 3e-66
Identities = 141/269 (52%), Positives = 184/269 (68%), Gaps = 10/269 (3%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RRGA FRHF E +DCNGMCDNCA E+KE+DA++H K++VS+LH+LQ N QRAT+LQL
Sbjct: 450 RRGAIFRHFGEVLQDCNGMCDNCASSIELKEIDATHHTKVVVSVLHDLQLNGQRATLLQL 509
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++FK K + LG S+ DLK+EEIEQ+IVQL+LDHVLKEEFQHTAY+TN+Y+ LG LWK
Sbjct: 510 VDKFKAKWKGLGRSNQDVDLKREEIEQLIVQLILDHVLKEEFQHTAYSTNAYVTLGPLWK 569
Query: 578 LVSQGKKQVILEISTRQHAIG------MPKNAKRTRMSQXXXXXXXXXXXXXXSNT---- 429
QG + V LEI+ Q + AKR+RMS S++
Sbjct: 570 PALQGNRPVKLEIAAVQSCQDKGGGGRSSRGAKRSRMSDLEAKLDELRRELSSSSSNGGI 629
Query: 428 GVLPHAILSSQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGA 249
+ PHA+LSS+QIS L QKPT+ A LE++IGKVKTEKYG RII+L++ ++K D
Sbjct: 630 SIFPHAVLSSEQISLLSCQKPTTEAELEQVIGKVKTEKYGSRIIELMRSHVK-----DAG 684
Query: 248 TGTAKDTTQECSKKQKNKHVVLVESSEDD 162
TG A D + K +K+K VV VESS+++
Sbjct: 685 TGNAVDANKR-HKNKKDKDVVCVESSDEE 712
>ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Brachypodium
distachyon]
Length = 704
Score = 257 bits (657), Expect = 4e-66
Identities = 136/260 (52%), Positives = 179/260 (68%), Gaps = 1/260 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RRGAFF+HF E ++CNGMCDNCA E+K++DA+ H K+IVSLL ++Q NDQRAT+LQL
Sbjct: 453 RRGAFFQHFGEAVQECNGMCDNCASSIELKDIDATYHTKIIVSLLQDMQHNDQRATLLQL 512
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++FK K + G S+ A DLKKEEIEQ+IVQL++D VLKEEFQHTAY TN+Y+ALG LWK
Sbjct: 513 VDKFKTKWKHSGCSNEAVDLKKEEIEQLIVQLIIDRVLKEEFQHTAYTTNAYVALGPLWK 572
Query: 578 LVSQGKKQVILEISTR-QHAIGMPKNAKRTRMSQXXXXXXXXXXXXXXSNTGVLPHAILS 402
L QG + V L + Q G K+ KR++MS N G+ PHA+LS
Sbjct: 573 LALQGNRPVKLTGAIHSQDTGGASKSTKRSQMSNLEAKLDDLRRTISSDNGGIFPHAVLS 632
Query: 401 SQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTTQ 222
+QQIS L + KPT++A LE LIGKVK +KYG II+++Q + + G D AK
Sbjct: 633 TQQISLLSSHKPTTIAELENLIGKVKADKYGSDIIEVMQSEI--DGGKDSGENGAK---- 686
Query: 221 ECSKKQKNKHVVLVESSEDD 162
+++K+K VVLVESSE++
Sbjct: 687 ---RQKKDKDVVLVESSEEE 703
>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis vinifera]
Length = 711
Score = 250 bits (639), Expect = 5e-64
Identities = 138/263 (52%), Positives = 184/263 (69%), Gaps = 4/263 (1%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFFRHFAEP +DCNGMCDNCA TEVKE+D S AK ++SLL ++Q+NDQR TMLQ+
Sbjct: 453 RRNAFFRHFAEPLQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQM 512
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ KVK ++LG+ DL+KEEIE +++QL+ D VLKEEFQHTAYATN+Y+ LG LWK
Sbjct: 513 VDKMKVKNKDLGS-----DLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWK 567
Query: 578 LVSQGKKQVILEISTR-QHAIGMPKNAKRTRMSQ-XXXXXXXXXXXXXXSNTGVLPHAIL 405
VS GK+ V LEIST+ + G K++KR+ S ++ G+ PH++L
Sbjct: 568 QVSHGKRIVKLEISTKVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVL 627
Query: 404 SSQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQ-GNDGATGTAKDT 228
S+QQIS L AQKPTS+ LE +IGK+KTEKYG +I++ I +Y ++EQ N T + +
Sbjct: 628 STQQISILSAQKPTSILELETMIGKLKTEKYGSKILEEIAKYTETEQPENRLKTDEGQGS 687
Query: 227 TQECSKKQK-NKHVVLVESSEDD 162
K+ K NK VVL+ESS D+
Sbjct: 688 ENRAPKRLKSNKAVVLIESSGDE 710
>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum lycopersicum]
Length = 708
Score = 250 bits (638), Expect = 6e-64
Identities = 137/261 (52%), Positives = 179/261 (68%), Gaps = 2/261 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFFRHFAEP ++CNGMCDNCA EV+ELD S+HAKLIVS+L ++QENDQR TMLQL
Sbjct: 453 RRSAFFRHFAEPLQECNGMCDNCAFSNEVEELDVSSHAKLIVSMLKDIQENDQRVTMLQL 512
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVL-KEEFQHTAYATNSYLALGSLW 582
VE+ KVK + LG PDLKK+E+EQ++++LL VL KEEFQHTAYATN+Y+ +G L
Sbjct: 513 VEKLKVKQKNLG-----PDLKKDELEQLVIKLLRASVLHKEEFQHTAYATNAYVTVGPLA 567
Query: 581 KLVSQGKKQVILEISTRQ-HAIGMPKNAKRTRMSQXXXXXXXXXXXXXXSNTGVLPHAIL 405
K V QG K + +E+STRQ K++KR R + + G+ PH++L
Sbjct: 568 KQVLQGNKIIKVELSTRQTRTSSSMKSSKRERSTGLNDKLDELRKELASIHGGIFPHSVL 627
Query: 404 SSQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTT 225
S+QQISTL AQKP S+ LEK+IGK+KTEKYG RI++ I Y Q N+ A G+ +
Sbjct: 628 STQQISTLSAQKPKSIEELEKIIGKLKTEKYGGRILEEIASYESDPQKNN-ADGSKETKG 686
Query: 224 QECSKKQKNKHVVLVESSEDD 162
K + K +V++ESSED+
Sbjct: 687 NTVKKLKTKKTLVVLESSEDE 707
>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 248 bits (633), Expect = 2e-63
Identities = 134/262 (51%), Positives = 182/262 (69%), Gaps = 3/262 (1%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFFRHFAEP +DCNGMCDNCA TEVKE+D S AK ++SLL ++Q+NDQR TMLQ+
Sbjct: 453 RRNAFFRHFAEPLQDCNGMCDNCAFSTEVKEVDVSCLAKAMISLLQDMQDNDQRLTMLQM 512
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ KVK ++LG+ DL+KEEIE +++QL+ D VLKEEFQHTAYATN+Y+ LG LWK
Sbjct: 513 VDKMKVKNKDLGS-----DLRKEEIEHLVIQLIRDRVLKEEFQHTAYATNAYVTLGLLWK 567
Query: 578 LVSQGKKQVILEISTR-QHAIGMPKNAKRTRMSQ-XXXXXXXXXXXXXXSNTGVLPHAIL 405
VS GK+ V LEIST+ + G K++KR+ S ++ G+ PH++L
Sbjct: 568 QVSHGKRIVKLEISTKVKTKTGNMKSSKRSLTSSGLELKLDELRKELSSTHGGIFPHSVL 627
Query: 404 SSQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTT 225
S+QQIS L AQKPTS+ + +IGK+KTEKYG +I++ I +Y ++EQ + + +
Sbjct: 628 STQQISILSAQKPTSILEAKTMIGKLKTEKYGSKILEEIAKYTETEQPENVPPDDRQGSE 687
Query: 224 QECSKKQK-NKHVVLVESSEDD 162
K+ K NK VVL+ESS D+
Sbjct: 688 NRAPKRLKSNKAVVLIESSGDE 709
>ref|NP_001168975.1| uncharacterized protein LOC100382802 [Zea mays]
gi|223974195|gb|ACN31285.1| unknown [Zea mays]
Length = 710
Score = 248 bits (633), Expect = 2e-63
Identities = 134/261 (51%), Positives = 178/261 (68%), Gaps = 2/261 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
R GAFFRHF E P+DCNGMCDNCA E K++D + H K+IVSLLH++Q NDQRAT+LQL
Sbjct: 453 RHGAFFRHFGEVPQDCNGMCDNCASTIEQKDIDVTYHTKIIVSLLHDMQLNDQRATLLQL 512
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++FK K + LG+ + A DL+KEE+EQ+IV L+LD+VLKEEFQHTAY+TN+Y+ LG+LWK
Sbjct: 513 VDKFKSKWKGLGSFNEAVDLRKEEVEQLIVNLILDNVLKEEFQHTAYSTNAYVTLGALWK 572
Query: 578 LVSQGKKQVILEISTRQHAIGM-PKNAKRTRMSQXXXXXXXXXXXXXXSNT-GVLPHAIL 405
QG + V LEI+ + K AKR RMS + + + PHA+L
Sbjct: 573 PALQGNRVVKLEIAIASKDRDVRSKGAKRGRMSDLEAKLDELRRDLSSTGSDAIFPHAVL 632
Query: 404 SSQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTT 225
++QQIS L +QKPT+ A LEK+IGKVKT KYG +II+L++ + S G G D
Sbjct: 633 TAQQISLLSSQKPTTPAELEKVIGKVKTRKYGSKIIELMRSHDNSGSGRGKEAG---DEH 689
Query: 224 QECSKKQKNKHVVLVESSEDD 162
+ K K++ VV VESSE++
Sbjct: 690 RAKKIKTKDEDVVCVESSEEE 710
>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
[Ricinus communis]
Length = 714
Score = 248 bits (632), Expect = 3e-63
Identities = 129/260 (49%), Positives = 177/260 (68%), Gaps = 1/260 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFFRHF+EP +DCNGMCDNCA EV E+D ++HAK +VSLL ++ +NDQR TMLQL
Sbjct: 460 RRSAFFRHFSEPLQDCNGMCDNCAFSNEVMEVDVTSHAKTMVSLLQDMHDNDQRLTMLQL 519
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ K K +ELG DLK+EEIEQ+++QL+LD+V KEEFQHTAYATN+Y+ G L K
Sbjct: 520 VDKVKNKHKELGA-----DLKREEIEQLVIQLILDNVFKEEFQHTAYATNAYVKTGPLAK 574
Query: 578 LVSQGKKQVILEISTRQHAIGMPKNAKRTRM-SQXXXXXXXXXXXXXXSNTGVLPHAILS 402
V QG+K V LEIS +Q+ G AKR+ M S + G+LPH++LS
Sbjct: 575 QVLQGRKIVKLEISNKQNKDGKMNKAKRSLMLSGLEFKLDKLRKELSAEHEGILPHSVLS 634
Query: 401 SQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTTQ 222
SQQ+S + AQKP S LEK+IGK+KTE+YG RI++ I+++ S + ++G +
Sbjct: 635 SQQMSMISAQKPNSTEELEKIIGKLKTERYGNRILEEIKKFAGSNESDNGILNDEGSKRR 694
Query: 221 ECSKKQKNKHVVLVESSEDD 162
+ + K +VL+ESS+D+
Sbjct: 695 PSKRLKTKKDLVLIESSDDE 714
>ref|XP_004301675.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Fragaria vesca subsp. vesca]
Length = 708
Score = 247 bits (631), Expect = 4e-63
Identities = 128/260 (49%), Positives = 180/260 (69%), Gaps = 1/260 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR +FFRHFAEP +DCNGMCDNCA EVKE+D S HAKL+V+LL ++QEN+QR T+LQL
Sbjct: 455 RRSSFFRHFAEPLQDCNGMCDNCAFSNEVKEVDVSRHAKLMVTLLKDVQENEQRLTVLQL 514
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ K+K +E+G+ +LK+EEIEQ+++QL+L VLKEEFQHTAY+TN+Y+ LG L K
Sbjct: 515 VDKIKIKHKEVGS-----ELKREEIEQLVIQLILGRVLKEEFQHTAYSTNAYVTLGPLAK 569
Query: 578 LVSQGKKQVILEISTRQHAIGMPKNAKRTRMSQ-XXXXXXXXXXXXXXSNTGVLPHAILS 402
V QG+ V LE+ST Q + ++ KR+R S + G+ PH++LS
Sbjct: 570 QVLQGRSSVKLEMSTGQKKVAGVRSVKRSRASSCLEQKLDELRKELSSDHGGIFPHSVLS 629
Query: 401 SQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTTQ 222
+QQIS + QKP S+ LEK+IGKVKTEKYG RI++ + Y ++Q + ++T +
Sbjct: 630 TQQISMIDDQKPNSMEQLEKIIGKVKTEKYGSRILEQVSMYADAKQPVEDK--EEQETER 687
Query: 221 ECSKKQKNKHVVLVESSEDD 162
SK+ KN +L+ESS+D+
Sbjct: 688 RSSKRLKNTEPLLIESSDDE 707
>gb|EMJ10069.1| hypothetical protein PRUPE_ppa026000mg, partial [Prunus persica]
Length = 308
Score = 246 bits (627), Expect = 1e-62
Identities = 131/261 (50%), Positives = 176/261 (67%), Gaps = 2/261 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR +FFRHFAEP +DCNGMCDNCA EVKE+DAS HAKLI+SLL + QENDQR T+LQL
Sbjct: 54 RRSSFFRHFAEPLQDCNGMCDNCAFSNEVKEVDASRHAKLIISLLQDTQENDQRLTVLQL 113
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ K K +ELG+ +LK+EEIEQ++++L+LD LKEEFQHTAY+TN+Y+ +G L
Sbjct: 114 VDKIKAKHKELGS-----ELKREEIEQLVIKLILDRSLKEEFQHTAYSTNAYVTIGPLAN 168
Query: 578 LVSQGKKQVILEISTRQHAIGMPKNAKRT-RMSQXXXXXXXXXXXXXXSNTGVLPHAILS 402
V GK V LEIS+ Q+ + K+ KR+ S + G+ PH++LS
Sbjct: 169 QVLHGKCSVKLEISSGQNKVAGIKSVKRSCASSGLELKLDELRKELSSVHGGIFPHSVLS 228
Query: 401 SQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTTQ 222
+QQI+ + AQKP S+ LE +IGK+K EKYG RI++ + Y S Q D +D
Sbjct: 229 TQQINMISAQKPNSMELLENIIGKLKAEKYGSRILEQVNTYANSTQPEDAKED--QDIEN 286
Query: 221 ECSKKQKN-KHVVLVESSEDD 162
SK+ K+ KH+VLVESS+D+
Sbjct: 287 RASKRLKSKKHLVLVESSDDE 307
>gb|EMT10122.1| ATP-dependent DNA helicase Q1 [Aegilops tauschii]
Length = 278
Score = 243 bits (619), Expect = 1e-61
Identities = 135/264 (51%), Positives = 174/264 (65%), Gaps = 5/264 (1%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKD----CNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRAT 771
RRGAFF+HF E ++ GMCDNC E+K++DA+ H K+IVSLL E+Q+NDQRAT
Sbjct: 24 RRGAFFQHFGEAVQENATFLAGMCDNCVSSIELKDIDATYHTKIIVSLLQEMQQNDQRAT 83
Query: 770 MLQLVERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALG 591
+LQLV++FK K + G S+ A DLKKEEIEQ+IVQL+LD VLKEEFQHTAY TN+Y+ LG
Sbjct: 84 LLQLVDKFKTKWKHSGCSNEAVDLKKEEIEQLIVQLILDRVLKEEFQHTAYTTNAYVVLG 143
Query: 590 SLWKLVSQGKKQVILEISTRQHAIG-MPKNAKRTRMSQXXXXXXXXXXXXXXSNTGVLPH 414
LWK QG + V L + G K+AKR +MS N GV PH
Sbjct: 144 PLWKPALQGNRPVKLTSAIHSQDSGDRFKSAKRNQMSNLEAKLDDLRRTISSRNGGVFPH 203
Query: 413 AILSSQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAK 234
A+LS++QIS L PT++A LEKLIGKVKT+KYG II E ++SE TG+ K
Sbjct: 204 AVLSTEQISLLNCHTPTTIAELEKLIGKVKTDKYGSDII----EVMRSE------TGSGK 253
Query: 233 DTTQECSKKQKNKHVVLVESSEDD 162
D+ +++K+K VV VESSE++
Sbjct: 254 DSGDGAKRQKKDKGVVFVESSEEE 277
>gb|ESW30123.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
Length = 702
Score = 239 bits (610), Expect = 1e-60
Identities = 130/262 (49%), Positives = 179/262 (68%), Gaps = 2/262 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFFRHFAEP ++CNGMCD CA EVKE+D S+HAKL+VSLL ++Q NDQR+TMLQL
Sbjct: 451 RRSAFFRHFAEPLQECNGMCDICAFSREVKEMDVSDHAKLMVSLLQDMQVNDQRSTMLQL 510
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ K+K ++ G+ +LK+E+ EQ+I+ LLL LKEEFQHTAYATN+Y+A+G L K
Sbjct: 511 VDKMKIKQKKQGS-----ELKREDNEQLILHLLLGRFLKEEFQHTAYATNAYIAVGPLAK 565
Query: 578 LVSQGKKQVILEISTRQHAIGMPKNAKRT-RMSQXXXXXXXXXXXXXXSNTGVLPHAILS 402
+ QGKK V LEI T ++ KR+ S ++ G+LPH++LS
Sbjct: 566 QILQGKKSVTLEIYTEHRTKAALRSVKRSLESSDLELKLDELRKELSSAHGGILPHSVLS 625
Query: 401 SQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTTQ 222
++QIS L +QKP SL LEK+IGK+KTEKYG RI+ I++Y SE + ++T
Sbjct: 626 TEQISLLSSQKPNSLEQLEKVIGKLKTEKYGNRILQQIEKYSDSELTD------KQETDG 679
Query: 221 ECSKKQK-NKHVVLVESSEDDQ 159
+K+ K K++VL+ESSED++
Sbjct: 680 RAAKRSKTKKNLVLIESSEDEE 701
>ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cicer arietinum]
Length = 704
Score = 234 bits (597), Expect = 4e-59
Identities = 128/263 (48%), Positives = 175/263 (66%), Gaps = 4/263 (1%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFFRHFAEP ++C+GMCD CA +EVKE+D S HAKL+VSLL E+Q +DQR+TMLQL
Sbjct: 454 RRSAFFRHFAEPLQECDGMCDICAFSSEVKEVDVSRHAKLMVSLLQEIQTSDQRSTMLQL 513
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ KVK +E+G+ DLK+EE+EQ+I+ LLLD LKEEFQHTAY+TN+Y+ +G L K
Sbjct: 514 VDKMKVKQKEIGS-----DLKREEMEQLILHLLLDRALKEEFQHTAYSTNAYITVGPLAK 568
Query: 578 LVSQGKKQVILEISTRQHAIGMPKNAKRTRMSQXXXXXXXXXXXXXXSNTGVLPHAILSS 399
+ QGKK V LE+ST + + + S + G+LPH++LS+
Sbjct: 569 QILQGKKTVKLEVSTEKKTKASVRLKRCLGSSGLELKLDELRKELSSIHGGILPHSVLST 628
Query: 398 QQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYL----KSEQGNDGATGTAKD 231
QQIS L +QKP SL LEK+IGK+KTEKYG +I++ I +Y EQ +DG
Sbjct: 629 QQISLLCSQKPNSLEQLEKVIGKLKTEKYGNKILEQIVKYSDFKPTDEQVSDG------- 681
Query: 230 TTQECSKKQKNKHVVLVESSEDD 162
+ + + K++VL+ESS D+
Sbjct: 682 --RAAKRSKTKKNLVLIESSGDE 702
>ref|XP_002304389.1| DNA helicase family protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| DNA helicase family protein
[Populus trichocarpa]
Length = 718
Score = 234 bits (597), Expect = 4e-59
Identities = 131/267 (49%), Positives = 181/267 (67%), Gaps = 8/267 (2%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFFRHFAEP +DCNGMCDNCA +EV E+D S HAK++VSLL + QE DQR TMLQL
Sbjct: 457 RRNAFFRHFAEPLQDCNGMCDNCAFLSEVMEVDVSRHAKVMVSLLQDTQEKDQRLTMLQL 516
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ K K +ELG+ D+KKEE+EQ+++QL+LD V KEE+QHTAYATN+Y+ +G L
Sbjct: 517 VDKMKNK-KELGS-----DIKKEEMEQLVIQLILDFVFKEEYQHTAYATNAYVTIGPLAN 570
Query: 578 LVSQGKKQVILEISTRQHAIG-MPKNAKRT-RMSQXXXXXXXXXXXXXXSNTGVLPHAIL 405
V QGKK V LEIS++Q G K+AK + S + G+ PH++L
Sbjct: 571 QVLQGKKIVKLEISSKQKNKGDSMKSAKHSLAFSGLELKLDELREKLSSGHGGIFPHSVL 630
Query: 404 SSQQISTLGAQKPTSLA-----YLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGT 240
SSQQ+S + +QKP+S +LEK+IGK+KTEKYG +I+D I++Y SE ++G
Sbjct: 631 SSQQMSMISSQKPSSAQEASPYHLEKIIGKLKTEKYGSKILDEIKKYTGSEPPDNGMLNE 690
Query: 239 AKDTTQECSKKQKNKH-VVLVESSEDD 162
+ + SK+ K K +V++ESS+++
Sbjct: 691 EEGSGNRASKRLKTKKGIVVIESSDEE 717
>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula] gi|355513912|gb|AES95535.1| ATP-dependent DNA
helicase RecQ family protein expressed [Medicago
truncatula]
Length = 685
Score = 232 bits (592), Expect = 1e-58
Identities = 128/263 (48%), Positives = 172/263 (65%), Gaps = 4/263 (1%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFFRHFAEP ++CNGMCD CA EV E+D S HAKL+VSLL ++Q +DQR+TMLQL
Sbjct: 436 RRSAFFRHFAEPLQECNGMCDICAFSCEVNEVDVSRHAKLMVSLLQDIQASDQRSTMLQL 495
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
VE+ K K +E+G+ LK+EE+EQ+I+ LLL+ LKEEFQHTAY+TN+Y+ +G L K
Sbjct: 496 VEKMKTKQKEIGSY-----LKREEMEQLILHLLLERALKEEFQHTAYSTNAYITVGPLAK 550
Query: 578 LVSQGKKQVILEISTRQHAIGMPKNAKRTRMSQXXXXXXXXXXXXXXSNTGVLPHAILSS 399
+ QGKK V LEIST + + + S ++ G+LPH++LS+
Sbjct: 551 QILQGKKTVKLEISTEEKTKASARLKRSLGSSGLELKLDELRKELSSNHGGILPHSVLST 610
Query: 398 QQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEY----LKSEQGNDGATGTAKD 231
QQIS L +QKP SL LEK IGK+KTEKYG +I+ I +Y L EQ NDG
Sbjct: 611 QQISLLCSQKPNSLEELEKAIGKLKTEKYGNKILAQIVKYSDFELTDEQVNDG------- 663
Query: 230 TTQECSKKQKNKHVVLVESSEDD 162
+ + + K++VL+E+SED+
Sbjct: 664 --RAAKRSKTKKNLVLIETSEDE 684
>ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X2 [Citrus sinensis]
Length = 567
Score = 229 bits (583), Expect = 1e-57
Identities = 121/265 (45%), Positives = 180/265 (67%), Gaps = 5/265 (1%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR FFRHFAEP +DCNGMCD CA EV E+D + HA+ I+SLL ++Q+N+QR TMLQL
Sbjct: 307 RRSTFFRHFAEPLQDCNGMCDICAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQL 366
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ K+K++E+ + DLK+EEIEQ+++QL++D VL EEFQHTAY+TN+Y+ +G L K
Sbjct: 367 VDKMKIKLKEIDS-----DLKREEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAK 421
Query: 578 LVSQGKKQVILEIST-RQHAIGMPKNAKRT-RMSQXXXXXXXXXXXXXXSNTGVLPHAIL 405
LV QGKK + LEIS+ +++ K+ KR+ S + G+LPH++L
Sbjct: 422 LVLQGKKIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASISGGILPHSVL 481
Query: 404 SSQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDT- 228
SSQ I + A+KP+++ LEK+IGK+KT KYG RI+++I + SEQ +D + ++
Sbjct: 482 SSQLIRLISARKPSTMEELEKIIGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQG 541
Query: 227 --TQECSKKQKNKHVVLVESSEDDQ 159
+ + +K K VV+V+SS+D +
Sbjct: 542 RGARASKRTKKEKAVVVVDSSDDSE 566
>ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X1 [Citrus sinensis]
Length = 715
Score = 229 bits (583), Expect = 1e-57
Identities = 121/265 (45%), Positives = 180/265 (67%), Gaps = 5/265 (1%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR FFRHFAEP +DCNGMCD CA EV E+D + HA+ I+SLL ++Q+N+QR TMLQL
Sbjct: 455 RRSTFFRHFAEPLQDCNGMCDICAFSYEVNEVDVTRHAQCIISLLQDIQDNNQRLTMLQL 514
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ K+K++E+ + DLK+EEIEQ+++QL++D VL EEFQHTAY+TN+Y+ +G L K
Sbjct: 515 VDKMKIKLKEIDS-----DLKREEIEQLVLQLIIDRVLSEEFQHTAYSTNAYVTIGPLAK 569
Query: 578 LVSQGKKQVILEIST-RQHAIGMPKNAKRT-RMSQXXXXXXXXXXXXXXSNTGVLPHAIL 405
LV QGKK + LEIS+ +++ K+ KR+ S + G+LPH++L
Sbjct: 570 LVLQGKKIIKLEISSVQKNTADNKKSTKRSLTSSALEFELDELRKELASISGGILPHSVL 629
Query: 404 SSQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDT- 228
SSQ I + A+KP+++ LEK+IGK+KT KYG RI+++I + SEQ +D + ++
Sbjct: 630 SSQLIRLISARKPSTMEELEKIIGKLKTGKYGSRILEVISKCGNSEQQHDNNAVSKEEQG 689
Query: 227 --TQECSKKQKNKHVVLVESSEDDQ 159
+ + +K K VV+V+SS+D +
Sbjct: 690 RGARASKRTKKEKAVVVVDSSDDSE 714
>ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X2 [Glycine max]
Length = 690
Score = 228 bits (581), Expect = 3e-57
Identities = 125/255 (49%), Positives = 170/255 (66%), Gaps = 1/255 (0%)
Frame = -2
Query: 938 RRGAFFRHFAEPPKDCNGMCDNCAHETEVKELDASNHAKLIVSLLHELQENDQRATMLQL 759
RR AFF HFAEP ++CNGMCD CA +EVKE+D S HAKL+VSLL ++Q NDQR+TMLQL
Sbjct: 446 RRSAFFHHFAEPLQECNGMCDICAFSSEVKEVDVSGHAKLMVSLLQDMQANDQRSTMLQL 505
Query: 758 VERFKVKIRELGTSSPAPDLKKEEIEQMIVQLLLDHVLKEEFQHTAYATNSYLALGSLWK 579
V++ K+K +ELG+ +LK+EEIEQ+I+ LLL LKEEFQHT YATN+Y+A+GSL K
Sbjct: 506 VDKMKIKQKELGS-----ELKREEIEQLILHLLLARFLKEEFQHTPYATNAYIAVGSLAK 560
Query: 578 LVSQGKKQVILEISTRQHAIGMPKNAKR-TRMSQXXXXXXXXXXXXXXSNTGVLPHAILS 402
+ QGKK V LEI T Q ++AK+ S ++ G+LPH++LS
Sbjct: 561 QILQGKKSVKLEIYTEQRTKDGVRSAKQCLGSSGLELKLDELRKELSSAHGGILPHSVLS 620
Query: 401 SQQISTLGAQKPTSLAYLEKLIGKVKTEKYGERIIDLIQEYLKSEQGNDGATGTAKDTTQ 222
++QI L +QKP SL LEKLIGK++TEKYG RI+ I++Y E T + +
Sbjct: 621 TEQIIQLASQKPNSLEQLEKLIGKLRTEKYGNRILKQIEKYYDFE-----PTDKQEIDAR 675
Query: 221 ECSKKQKNKHVVLVE 177
+ + K++V++E
Sbjct: 676 AAKRLKSKKNLVIIE 690