BLASTX nr result
ID: Zingiber24_contig00039139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00039139
(257 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor... 114 1e-23
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor... 114 1e-23
ref|XP_004499233.1| PREDICTED: probable pre-mRNA-splicing factor... 114 1e-23
ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago tr... 114 1e-23
ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinu... 114 1e-23
ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor... 113 2e-23
ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216... 113 2e-23
gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. m... 113 2e-23
gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus... 112 4e-23
ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [S... 112 4e-23
ref|XP_006648562.1| PREDICTED: probable pre-mRNA-splicing factor... 112 5e-23
gb|EMJ14920.1| hypothetical protein PRUPE_ppa000417mg [Prunus pe... 112 5e-23
dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group] 112 5e-23
gb|EEE56790.1| hypothetical protein OsJ_06372 [Oryza sativa Japo... 112 5e-23
gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indi... 112 5e-23
ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor... 112 7e-23
ref|XP_006290254.1| hypothetical protein CARUB_v10016599mg [Caps... 112 7e-23
ref|NP_189288.1| probable pre-mRNA-splicing factor ATP-dependent... 112 7e-23
dbj|BAF00744.1| putative ATP-dependent RNA helicase [Arabidopsis... 112 7e-23
emb|CAA66825.1| RNA helicase [Arabidopsis thaliana] gi|1495271|e... 112 7e-23
>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Glycine max]
gi|571539750|ref|XP_006601342.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Glycine max]
Length = 1197
Score = 114 bits (286), Expect = 1e-23
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V EYP +D+ DG+LYQ ED+P+FLQGQSRYS
Sbjct: 377 PERWEAKQLIASGVLSVSEYPTYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYS 436
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSLGRAAALQSA
Sbjct: 437 MDMSPVKIFKNPEGSLGRAAALQSA 461
>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Glycine max]
gi|571512325|ref|XP_006596566.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Glycine max]
Length = 1203
Score = 114 bits (286), Expect = 1e-23
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V EYP +D+ DG+LYQ ED+P+FLQGQSRYS
Sbjct: 383 PERWEAKQLIASGVLSVSEYPTYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYS 442
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSLGRAAALQSA
Sbjct: 443 MDMSPVKIFKNPEGSLGRAAALQSA 467
>ref|XP_004499233.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cicer arietinum]
Length = 1203
Score = 114 bits (285), Expect = 1e-23
Identities = 56/85 (65%), Positives = 67/85 (78%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V EYP +D+ DG++YQ ED+P+FLQGQSRYS
Sbjct: 383 PERWEAKQLIASGVLSVSEYPTYDDEGDGVMYQEEGAEEELEIEMNEDEPAFLQGQSRYS 442
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSLGRAAALQSA
Sbjct: 443 MDMSPVKIFKNPEGSLGRAAALQSA 467
>ref|XP_003592732.1| ATP-dependent RNA helicase DHX8 [Medicago truncatula]
gi|355481780|gb|AES62983.1| ATP-dependent RNA helicase
DHX8 [Medicago truncatula]
Length = 1154
Score = 114 bits (285), Expect = 1e-23
Identities = 55/85 (64%), Positives = 68/85 (80%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEA++LI +GV++V EYP +D++DG++YQ ED+P+FLQGQSRYS
Sbjct: 368 PERWEAQQLIASGVLSVSEYPTYDDEEDGVMYQEEGAEEELEIEMNEDEPAFLQGQSRYS 427
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSLGRAAALQSA
Sbjct: 428 MDMSPVKIFKNPEGSLGRAAALQSA 452
>ref|XP_002510773.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551474|gb|EEF52960.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1177
Score = 114 bits (285), Expect = 1e-23
Identities = 56/85 (65%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV+ V EYPM +D+ DG+LYQ ED+P+FLQGQ+RYS
Sbjct: 357 PERWEAKQLIASGVLGVQEYPMYDDEGDGLLYQEGGAEEELEIELNEDEPAFLQGQTRYS 416
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSL RAAALQSA
Sbjct: 417 VDMSPVKIFKNPEGSLSRAAALQSA 441
>ref|XP_004156439.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Cucumis sativus]
Length = 1181
Score = 113 bits (283), Expect = 2e-23
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V EYP +D+ DG+LYQ ED+P+FLQGQSRYS
Sbjct: 361 PERWEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYS 420
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
IDMSPVKIFKNPEGSL RAAALQSA
Sbjct: 421 IDMSPVKIFKNPEGSLSRAAALQSA 445
>ref|XP_004139208.1| PREDICTED: uncharacterized protein LOC101216792 [Cucumis sativus]
Length = 1218
Score = 113 bits (283), Expect = 2e-23
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V EYP +D+ DG+LYQ ED+P+FLQGQSRYS
Sbjct: 398 PERWEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYS 457
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
IDMSPVKIFKNPEGSL RAAALQSA
Sbjct: 458 IDMSPVKIFKNPEGSLSRAAALQSA 482
>gb|ADN33898.1| ATP-dependent RNA helicase [Cucumis melo subsp. melo]
Length = 953
Score = 113 bits (283), Expect = 2e-23
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V EYP +D+ DG+LYQ ED+P+FLQGQSRYS
Sbjct: 403 PERWEAKQLIASGVLSVSEYPSYDDEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYS 462
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
IDMSPVKIFKNPEGSL RAAALQSA
Sbjct: 463 IDMSPVKIFKNPEGSLSRAAALQSA 487
>gb|ESW32681.1| hypothetical protein PHAVU_001G008600g [Phaseolus vulgaris]
Length = 1201
Score = 112 bits (281), Expect = 4e-23
Identities = 56/85 (65%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PE+WEAK+LI +GVM V EYP +++ DG+LYQ ED+P+FLQGQSRYS
Sbjct: 381 PEKWEAKQLIASGVMGVSEYPTYDEEGDGLLYQEEGAEEELEIELNEDEPAFLQGQSRYS 440
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSLGRAAALQSA
Sbjct: 441 MDMSPVKIFKNPEGSLGRAAALQSA 465
>ref|XP_002468351.1| hypothetical protein SORBIDRAFT_01g044300 [Sorghum bicolor]
gi|241922205|gb|EER95349.1| hypothetical protein
SORBIDRAFT_01g044300 [Sorghum bicolor]
Length = 1242
Score = 112 bits (281), Expect = 4e-23
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V +YPM ++D DG++YQ ED+P+FLQGQSR+S
Sbjct: 422 PERWEAKQLIASGVLDVRDYPMFDEDGDGMMYQEEGAEEELEIELNEDEPAFLQGQSRFS 481
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
IDMSPVKIFKNPEGSL RAAALQSA
Sbjct: 482 IDMSPVKIFKNPEGSLSRAAALQSA 506
>ref|XP_006648562.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like [Oryza brachyantha]
Length = 1187
Score = 112 bits (280), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V +YPM ++D DG+LYQ ED+P+FLQGQSR+S
Sbjct: 367 PERWEAKQLIASGVLDVRDYPMFDEDGDGMLYQEEGAEEEQEIELNEDEPAFLQGQSRFS 426
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
IDMSPVKIFKNPEGSL RAAALQ+A
Sbjct: 427 IDMSPVKIFKNPEGSLSRAAALQTA 451
>gb|EMJ14920.1| hypothetical protein PRUPE_ppa000417mg [Prunus persica]
Length = 1198
Score = 112 bits (280), Expect = 5e-23
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PE+WEAK+LI +GV+ V EYPM +++ DG+LYQ ED+P+FL GQSRYS
Sbjct: 378 PEKWEAKQLIASGVLGVTEYPMYDEETDGMLYQEEGAEEELEIELNEDEPAFLNGQSRYS 437
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSLGRAAALQSA
Sbjct: 438 VDMSPVKIFKNPEGSLGRAAALQSA 462
>dbj|BAD23339.1| putative RNA helicase [Oryza sativa Japonica Group]
Length = 1240
Score = 112 bits (280), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V +YPM ++D DG+LYQ ED+P+FLQGQSR+S
Sbjct: 420 PERWEAKQLIASGVLDVRDYPMFDEDGDGMLYQEEGAEEEQEIELNEDEPAFLQGQSRFS 479
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
IDMSPVKIFKNPEGSL RAAALQ+A
Sbjct: 480 IDMSPVKIFKNPEGSLSRAAALQTA 504
>gb|EEE56790.1| hypothetical protein OsJ_06372 [Oryza sativa Japonica Group]
Length = 953
Score = 112 bits (280), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V +YPM ++D DG+LYQ ED+P+FLQGQSR+S
Sbjct: 420 PERWEAKQLIASGVLDVRDYPMFDEDGDGMLYQEEGAEEEQEIELNEDEPAFLQGQSRFS 479
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
IDMSPVKIFKNPEGSL RAAALQ+A
Sbjct: 480 IDMSPVKIFKNPEGSLSRAAALQTA 504
>gb|EAY85485.1| hypothetical protein OsI_06862 [Oryza sativa Indica Group]
Length = 1240
Score = 112 bits (280), Expect = 5e-23
Identities = 55/85 (64%), Positives = 67/85 (78%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV++V +YPM ++D DG+LYQ ED+P+FLQGQSR+S
Sbjct: 420 PERWEAKQLIASGVLDVRDYPMFDEDGDGMLYQEEGAEEEQEIELNEDEPAFLQGQSRFS 479
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
IDMSPVKIFKNPEGSL RAAALQ+A
Sbjct: 480 IDMSPVKIFKNPEGSLSRAAALQTA 504
>ref|XP_004498154.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase-like isoform X1 [Cicer arietinum]
gi|502123536|ref|XP_004498155.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X2 [Cicer arietinum]
gi|502123538|ref|XP_004498156.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X3 [Cicer arietinum]
gi|502123540|ref|XP_004498157.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X4 [Cicer arietinum]
gi|502123542|ref|XP_004498158.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X5 [Cicer arietinum]
gi|502123544|ref|XP_004498159.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X6 [Cicer arietinum]
gi|502123546|ref|XP_004498160.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X7 [Cicer arietinum]
gi|502123548|ref|XP_004498161.1| PREDICTED: probable
pre-mRNA-splicing factor ATP-dependent RNA helicase-like
isoform X8 [Cicer arietinum]
Length = 1178
Score = 112 bits (279), Expect = 7e-23
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK++I +GV++V EYP +++ DG++YQ ED+P+FLQGQSRYS
Sbjct: 358 PERWEAKQMIASGVLSVSEYPTYDEEGDGVMYQEEGAEEELEIEMNEDEPAFLQGQSRYS 417
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSLGRAAALQSA
Sbjct: 418 MDMSPVKIFKNPEGSLGRAAALQSA 442
>ref|XP_006290254.1| hypothetical protein CARUB_v10016599mg [Capsella rubella]
gi|482558961|gb|EOA23152.1| hypothetical protein
CARUB_v10016599mg [Capsella rubella]
Length = 1174
Score = 112 bits (279), Expect = 7e-23
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV+ V E+PM ++D DG+LYQ ED+P+FLQGQ+RYS
Sbjct: 354 PERWEAKQLIASGVLKVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYS 413
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSL RAAALQSA
Sbjct: 414 VDMSPVKIFKNPEGSLSRAAALQSA 438
>ref|NP_189288.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase
[Arabidopsis thaliana]
gi|27735187|sp|Q38953.2|DHX8_ARATH RecName:
Full=Probable pre-mRNA-splicing factor ATP-dependent RNA
helicase gi|9293935|dbj|BAB01838.1| pre-mRNA splicing
factor ATP-dependent RNA helicase-like protein
[Arabidopsis thaliana] gi|332643657|gb|AEE77178.1|
probable pre-mRNA-splicing factor ATP-dependent RNA
helicase [Arabidopsis thaliana]
Length = 1168
Score = 112 bits (279), Expect = 7e-23
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV+ V E+PM ++D DG+LYQ ED+P+FLQGQ+RYS
Sbjct: 348 PERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYS 407
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSL RAAALQSA
Sbjct: 408 VDMSPVKIFKNPEGSLSRAAALQSA 432
>dbj|BAF00744.1| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|110740392|dbj|BAF02091.1| putative ATP-dependent RNA
helicase [Arabidopsis thaliana]
Length = 767
Score = 112 bits (279), Expect = 7e-23
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV+ V E+PM ++D DG+LYQ ED+P+FLQGQ+RYS
Sbjct: 4 PERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYS 63
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSL RAAALQSA
Sbjct: 64 VDMSPVKIFKNPEGSLSRAAALQSA 88
>emb|CAA66825.1| RNA helicase [Arabidopsis thaliana] gi|1495271|emb|CAA66613.1| RNA
helicase [Arabidopsis thaliana]
Length = 1121
Score = 112 bits (279), Expect = 7e-23
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = -2
Query: 256 PERWEAKKLIDAGVMNVHEYPMLNDDQDGILYQXXXXXXXXXXXXXEDKPSFLQGQSRYS 77
PERWEAK+LI +GV+ V E+PM ++D DG+LYQ ED+P+FLQGQ+RYS
Sbjct: 301 PERWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYS 360
Query: 76 IDMSPVKIFKNPEGSLGRAAALQSA 2
+DMSPVKIFKNPEGSL RAAALQSA
Sbjct: 361 VDMSPVKIFKNPEGSLSRAAALQSA 385