BLASTX nr result
ID: Zingiber24_contig00038949
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038949
(264 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004983049.1| PREDICTED: pentatricopeptide repeat-containi... 66 4e-09
gb|EMT03565.1| Pentatricopeptide repeat-containing protein [Aegi... 65 7e-09
ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [S... 65 1e-08
dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare] 64 2e-08
ref|XP_006470989.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_006431492.1| hypothetical protein CICLE_v10000271mg [Citr... 64 3e-08
gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japo... 61 2e-07
gb|AAS80150.1| ACT11D09.4 [Cucumis melo] 61 2e-07
ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group] g... 61 2e-07
ref|XP_006654311.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containi... 60 2e-07
gb|EMT09730.1| Pentatricopeptide repeat-containing protein [Aegi... 60 4e-07
ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-07
gb|EXB80396.1| hypothetical protein L484_010965 [Morus notabilis] 58 1e-06
ref|XP_006592648.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
emb|CBI29649.3| unnamed protein product [Vitis vinifera] 57 2e-06
ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera] 57 2e-06
ref|NP_172498.1| glutamine-rich protein 23 [Arabidopsis thaliana... 57 3e-06
>ref|XP_004983049.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Setaria italica]
Length = 921
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
I ALKV+ ++ ++ I+PN ++E+LV ALC G LDRARDL M R + E
Sbjct: 476 IDDALKVYGRMPDKEIKPNTTTFEILVKALCKAGDLDRARDLVMDMARGAVEPPQEFRES 535
Query: 181 LSDTFGKAGRSQEIE 225
+ D F K+ R +EIE
Sbjct: 536 VIDIFKKSNRQEEIE 550
>gb|EMT03565.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 754
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
+ ALKV+ ++ ++ I+PN ++E+LV ALC G LDRA DL M R + AT E
Sbjct: 281 VDDALKVYGRMADKEIKPNTTTFEILVNALCKEGELDRALDLVRDMARGGVVATPEFRES 340
Query: 181 LSDTFGKAGRSQEIE 225
+S+ F A R +EIE
Sbjct: 341 VSEIFKNADRHEEIE 355
>ref|XP_002465660.1| hypothetical protein SORBIDRAFT_01g043290 [Sorghum bicolor]
gi|241919514|gb|EER92658.1| hypothetical protein
SORBIDRAFT_01g043290 [Sorghum bicolor]
Length = 927
Score = 64.7 bits (156), Expect = 1e-08
Identities = 33/75 (44%), Positives = 48/75 (64%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
I ALKV+ ++ ++ I+PN +++E+LV ALC G+LD+ARDL M R+ I E
Sbjct: 474 IDDALKVYGRMPDKEIKPNTITFEILVKALCKEGNLDQARDLVMDMARNGIVPPPEFRES 533
Query: 181 LSDTFGKAGRSQEIE 225
+ D F KA R +EIE
Sbjct: 534 VVDFFKKADRQEEIE 548
>dbj|BAJ86663.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 931
Score = 64.3 bits (155), Expect = 2e-08
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
I ALKV+ ++ ++ I+PN ++E+LV ALC G LDRA DL M R + AT E
Sbjct: 475 IDDALKVYGRMADKEIKPNTTTFEILVNALCKEGELDRALDLVRDMARGGVVATPEFRES 534
Query: 181 LSDTFGKAGRSQEIE 225
+ + F A R +EIE
Sbjct: 535 VGEIFKNADRHEEIE 549
>ref|XP_006470989.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Citrus sinensis]
Length = 840
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
+++ + K+ E+ +P+ L Y+V+V LCN G D ++D+ +QM++ + T L
Sbjct: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
Query: 181 LSDTFGKAGRSQEIE 225
+ +TFGKAGR +EIE
Sbjct: 541 VRETFGKAGRGEEIE 555
>ref|XP_006431492.1| hypothetical protein CICLE_v10000271mg [Citrus clementina]
gi|557533614|gb|ESR44732.1| hypothetical protein
CICLE_v10000271mg [Citrus clementina]
Length = 840
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/75 (36%), Positives = 47/75 (62%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
+++ + K+ E+ +P+ L Y+V+V LCN G D ++D+ +QM++ + T L
Sbjct: 481 VAECAPILTKMGEKDPKPDFLIYDVVVRGLCNEGLFDMSKDIVDQMMKYGVGITPALQDF 540
Query: 181 LSDTFGKAGRSQEIE 225
+ +TFGKAGR +EIE
Sbjct: 541 VRETFGKAGRGEEIE 555
>gb|EEE63443.1| hypothetical protein OsJ_18256 [Oryza sativa Japonica Group]
Length = 937
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
+ ALKV+ ++ ++ I+PN ++E LV ALC G LD+AR+L M + + E
Sbjct: 489 MDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVTPPPEFRDS 548
Query: 181 LSDTFGKAGRSQEIE 225
+ D F AGR +EIE
Sbjct: 549 VIDIFKNAGRQEEIE 563
>gb|AAS80150.1| ACT11D09.4 [Cucumis melo]
Length = 896
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1
Query: 16 KVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSALLSDTF 195
++ K+ ER +P+ Y+V++ LCN G+LD +R+L +Q++R I T L + D F
Sbjct: 490 QILTKMGERDPKPDPTCYDVVIRGLCNEGALDTSRELLDQIMRYGIGLTPTLEEFVKDAF 549
Query: 196 GKAGRSQEIE 225
KAGR +EIE
Sbjct: 550 VKAGRHEEIE 559
>ref|NP_001055326.1| Os05g0365500 [Oryza sativa Japonica Group]
gi|46063434|gb|AAS79737.1| putative pentatricopeptide
(PPR) repeat-containing protein, PF01535 [Oryza sativa
Japonica Group] gi|54287606|gb|AAV31350.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|54291873|gb|AAV32241.1|
putative pentatricopeptide repeat-containing protein
[Oryza sativa Japonica Group]
gi|113578877|dbj|BAF17240.1| Os05g0365500 [Oryza sativa
Japonica Group]
Length = 911
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
+ ALKV+ ++ ++ I+PN ++E LV ALC G LD+AR+L M + + E
Sbjct: 489 MDDALKVYGRMPDKEIKPNTTTFETLVNALCKEGDLDKARELVSDMAKGGVTPPPEFRDS 548
Query: 181 LSDTFGKAGRSQEIE 225
+ D F AGR +EIE
Sbjct: 549 VIDIFKNAGRQEEIE 563
>ref|XP_006654311.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Oryza brachyantha]
Length = 754
Score = 60.5 bits (145), Expect = 2e-07
Identities = 27/75 (36%), Positives = 46/75 (61%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
+ ALKV+ ++ ++ I+PN ++E+L+ ALC G+LD+ARDL +M R + E
Sbjct: 332 MDDALKVYGRMADKEIKPNTTTFEILINALCKEGNLDQARDLVTEMARGGVACPPEFRES 391
Query: 181 LSDTFGKAGRSQEIE 225
+ + F GR +E+E
Sbjct: 392 VINIFKNDGRQEEVE 406
>ref|XP_003567254.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Brachypodium distachyon]
Length = 761
Score = 60.5 bits (145), Expect = 2e-07
Identities = 31/75 (41%), Positives = 43/75 (57%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
I ALKV+ ++ ++ I+PN ++E+LV ALC LDR RDL M R + A E
Sbjct: 474 IDDALKVYGRMPDKEIKPNTTTFEILVKALCKERELDRTRDLVRDMSRGGVVAPPEFREF 533
Query: 181 LSDTFGKAGRSQEIE 225
+S+ F A R EIE
Sbjct: 534 VSEIFKNADRHDEIE 548
>gb|EMT09730.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 1054
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/75 (40%), Positives = 44/75 (58%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
I ALKV+ ++ ++ I+P+ ++E+LV A C G LDRARDL M R + A E
Sbjct: 333 IDDALKVYGRMPDKEIKPSTATFEILVKASCKEGELDRARDLVRDMARGGVVAPPEFREC 392
Query: 181 LSDTFGKAGRSQEIE 225
+ + F A R +EIE
Sbjct: 393 IVEIFKTADRQEEIE 407
>ref|XP_004156778.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 559
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = +1
Query: 16 KVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSALLSDTF 195
++ K+ ER +P+ Y+V++ LCN G+LD +R+L +Q++R I T L + + F
Sbjct: 298 QILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKEAF 357
Query: 196 GKAGRSQEIE 225
KAGR +EIE
Sbjct: 358 VKAGRHEEIE 367
>ref|XP_004148094.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Cucumis sativus]
Length = 871
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/70 (38%), Positives = 44/70 (62%)
Frame = +1
Query: 16 KVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSALLSDTF 195
++ K+ ER +P+ Y+V++ LCN G+LD +R+L +Q++R I T L + + F
Sbjct: 464 QILTKMGERDPKPDPTCYDVVIRGLCNEGALDASRELLDQIMRYGIGLTPTLEEFVKEAF 523
Query: 196 GKAGRSQEIE 225
KAGR +EIE
Sbjct: 524 VKAGRHEEIE 533
>gb|EXB80396.1| hypothetical protein L484_010965 [Morus notabilis]
Length = 836
Score = 58.2 bits (139), Expect = 1e-06
Identities = 26/70 (37%), Positives = 43/70 (61%)
Frame = +1
Query: 16 KVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSALLSDTF 195
++ K+ E+ +P++ YEV++ LCN G+ D + DL E+++R I T L +++ F
Sbjct: 484 QILKKMGEKDPKPDVSCYEVVIKGLCNEGAFDVSLDLVEEVMRYGIGVTPTLQQFVNEAF 543
Query: 196 GKAGRSQEIE 225
K GR QEIE
Sbjct: 544 AKVGRGQEIE 553
>ref|XP_006592648.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Glycine max]
Length = 790
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/70 (35%), Positives = 44/70 (62%)
Frame = +1
Query: 16 KVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSALLSDTF 195
++ K+ E+ +P+ YEV++ LC G LD++R+L ++++R + TS L +++ F
Sbjct: 464 QILSKMGEKDPKPDPTCYEVVIKGLCADGLLDKSRELLDEVMRYGVGVTSSLREFVTEVF 523
Query: 196 GKAGRSQEIE 225
KAGR EIE
Sbjct: 524 KKAGRGDEIE 533
>emb|CBI29649.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 7 QALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSALLS 186
+ + V K+ E+ +P+ +YE+++ LC D +RDL QM+R I T L +
Sbjct: 479 ECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVV 538
Query: 187 DTFGKAGRSQEIE 225
+ FGK GRS+EIE
Sbjct: 539 EAFGKEGRSEEIE 551
>ref|XP_002267973.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g10270-like [Vitis vinifera]
Length = 627
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 7 QALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSALLS 186
+ + V K+ E+ +P+ +YE+++ LC D +RDL QM+R I T L +
Sbjct: 479 ECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVV 538
Query: 187 DTFGKAGRSQEIE 225
+ FGK GRS+EIE
Sbjct: 539 EAFGKEGRSEEIE 551
>emb|CAN60262.1| hypothetical protein VITISV_020169 [Vitis vinifera]
Length = 627
Score = 57.4 bits (137), Expect = 2e-06
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +1
Query: 7 QALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSALLS 186
+ + V K+ E+ +P+ +YE+++ LC D +RDL QM+R I T L +
Sbjct: 479 ECVPVLTKMGEKDPKPDPTTYEIVIKGLCKERLFDASRDLMGQMVRYNIGVTPSLREFVV 538
Query: 187 DTFGKAGRSQEIE 225
+ FGK GRS+EIE
Sbjct: 539 EAFGKEGRSEEIE 551
>ref|NP_172498.1| glutamine-rich protein 23 [Arabidopsis thaliana]
gi|75213379|sp|Q9SY69.1|PPR29_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g10270; AltName: Full=Protein GLUTAMINE-RICH PROTEIN
23 gi|4914329|gb|AAD32877.1|AC005489_15 F14N23.15
[Arabidopsis thaliana] gi|332190439|gb|AEE28560.1|
glutamine-rich protein 23 [Arabidopsis thaliana]
Length = 913
Score = 57.0 bits (136), Expect = 3e-06
Identities = 26/75 (34%), Positives = 48/75 (64%)
Frame = +1
Query: 1 ISQALKVFDKLWERGIRPNMLSYEVLVTALCNVGSLDRARDLFEQMLRSRINATSELSAL 180
++++ +V K+ ER +P+ Y+V+V LC+ +LD+A+D+ +M+R + T+ L
Sbjct: 522 LTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEMIRHNVGVTTVLREF 581
Query: 181 LSDTFGKAGRSQEIE 225
+ + F KAGR +EIE
Sbjct: 582 IIEVFEKAGRREEIE 596