BLASTX nr result

ID: Zingiber24_contig00038938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00038938
         (453 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526489.1| eukaryotic translation initiation factor 4g,...    64   2e-08
ref|XP_002269466.2| PREDICTED: eukaryotic translation initiation...    60   2e-07
emb|CAN77792.1| hypothetical protein VITISV_043311 [Vitis vinifera]    60   2e-07
ref|XP_006375192.1| hypothetical protein POPTR_0014s05150g [Popu...    58   1e-06
ref|XP_002302506.2| hypothetical protein POPTR_0002s14110g [Popu...    55   7e-06

>ref|XP_002526489.1| eukaryotic translation initiation factor 4g, putative [Ricinus
           communis] gi|223534164|gb|EEF35880.1| eukaryotic
           translation initiation factor 4g, putative [Ricinus
           communis]
          Length = 1753

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
 Frame = +2

Query: 20  TSVPPGSGQIPTNLQTPRYSYPLNQIGPNLNFLNSSAINNIPSGKSPSTALHDISEGLQL 199
           +S+P  SGQIP+N Q PRY+Y ++Q   N++F+N SA+N++P  KS  T++H +++   L
Sbjct: 431 SSLPLTSGQIPSNSQQPRYNYSVSQGPQNVSFVNPSAVNSLPINKS-GTSMHGMADPSNL 489

Query: 200 DALS-----ISASLPPTVQVTMKPSVGLQSVKAGAPL 295
           +        IS++   TVQV +KP+  ++   +  PL
Sbjct: 490 EHARDVHNVISSASSGTVQVKVKPAATVEKGVSSKPL 526


>ref|XP_002269466.2| PREDICTED: eukaryotic translation initiation factor 4G-like [Vitis
           vinifera]
          Length = 1935

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
 Frame = +2

Query: 2   SQLIFPT--SVPPGSGQIPTNLQTPRYSYPLNQIGPNLNFLNSSAINNIPSGKSPSTALH 175
           S L FP+  S+P  S  + ++ QTPR++YP++Q  P   F+N+   N++   K+  TA+ 
Sbjct: 444 SSLFFPSPSSLPLTSTPLTSSTQTPRFNYPVSQGPPTGPFINAPTHNSLSVSKT-GTAMQ 502

Query: 176 DISEGLQL----DALSISASLP-PTVQVTMKPSVGLQSVKAGAPLPSPSVVITMPSTKVE 340
            ++E L L    D  ++ +S+P  T QVT+KP+V     K    LP  S   T    KVE
Sbjct: 503 GVAEPLNLEHARDVHNVMSSVPSSTSQVTIKPAVVSVVEKVTDALPPLSSAAT---EKVE 559

Query: 341 PPMLVKTIADEITLNQKR-TEINPGGPGQQLKLISGPS 451
            P L++   +  + +  R T+IN     QQ K    PS
Sbjct: 560 SPKLLRLPGETSSFHLPRNTDINSETSLQQPKTDLEPS 597


>emb|CAN77792.1| hypothetical protein VITISV_043311 [Vitis vinifera]
          Length = 1778

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
 Frame = +2

Query: 2   SQLIFPT--SVPPGSGQIPTNLQTPRYSYPLNQIGPNLNFLNSSAINNIPSGKSPSTALH 175
           S L FP+  S+P  S  + ++ QTPR++YP++Q  P   F+N+   N++   K+  TA+ 
Sbjct: 444 SSLFFPSPSSLPLTSTPLTSSTQTPRFNYPVSQGPPTGPFINAPTHNSLSVSKT-GTAMQ 502

Query: 176 DISEGLQL----DALSISASLP-PTVQVTMKPSVGLQSVKAGAPLPSPSVVITMPSTKVE 340
            ++E L L    D  ++ +S+P  T QVT+KP+V     K    LP  S   T    KVE
Sbjct: 503 GVAEPLNLEHARDVHNVMSSVPSSTSQVTIKPAVVSVVEKVTDALPPLSSAAT---EKVE 559

Query: 341 PPMLVKTIADEITLNQKR-TEINPGGPGQQLKLISGPS 451
            P L++   +  + +  R T+IN     QQ K    PS
Sbjct: 560 SPKLLRLPGETSSFHLPRNTDINSETSLQQPKTDLEPS 597


>ref|XP_006375192.1| hypothetical protein POPTR_0014s05150g [Populus trichocarpa]
           gi|550323511|gb|ERP52989.1| hypothetical protein
           POPTR_0014s05150g [Populus trichocarpa]
          Length = 1922

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
 Frame = +2

Query: 17  PTSVPPGSGQIPTNLQTP-RYSYPLNQIGPNLNFLNSSAINNIPSGKSPSTALHDISEGL 193
           P+S+P   GQI  N Q P R++YP++Q   N+ + N+SA+N++P+ KS   A+H ++E  
Sbjct: 482 PSSLPLTGGQIAPNSQPPPRFNYPVSQGPQNVPYTNASALNSLPASKS-GIAIHGVAELH 540

Query: 194 QLDALS-----ISASLPPTVQVTMKPSVGLQSVKAGAP-LPSPSVV 313
           + +  S     IS++    VQVT+KP VG    K   P LP  S V
Sbjct: 541 KSEHASDAPNAISSTPSGVVQVTIKPPVGSIGEKVVEPSLPKISPV 586


>ref|XP_002302506.2| hypothetical protein POPTR_0002s14110g [Populus trichocarpa]
           gi|550344992|gb|EEE81779.2| hypothetical protein
           POPTR_0002s14110g [Populus trichocarpa]
          Length = 1896

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 9/114 (7%)
 Frame = +2

Query: 2   SQLIFP--TSVPPGSGQIPTNLQTP-RYSYPLNQIGPNLNFLNSSAINNIPSGKSPSTAL 172
           S L FP  +S+P    QI  N Q P R++YP++Q   N  ++N+SA+N++P  KS  T  
Sbjct: 439 SNLFFPAPSSLPLTGSQIAPNSQLPPRFNYPVSQPPQNAPYMNASALNSLPLSKS-GTVS 497

Query: 173 HDISEGLQLDAL-----SISASLPPTVQVTMKPSVGLQSVKAGAP-LPSPSVVI 316
           H ++E    +       +IS +    VQVT+KP+VG    K   P  P  S V+
Sbjct: 498 HGVAEPQNSEHARDARNAISLTPSGAVQVTVKPAVGSHGEKVVEPSFPKISSVV 551


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