BLASTX nr result

ID: Zingiber24_contig00038879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00038879
         (243 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004953786.1| PREDICTED: transcriptional regulator ATRX ho...    97   2e-18
ref|XP_004953785.1| PREDICTED: transcriptional regulator ATRX ho...    97   2e-18
ref|NP_001132133.1| uncharacterized protein LOC100193550 [Zea ma...    96   5e-18
ref|NP_001048002.1| Os02g0728700 [Oryza sativa Japonica Group] g...    96   6e-18
gb|ACG35331.1| hypothetical protein [Zea mays]                         95   1e-17
gb|EMT01183.1| hypothetical protein F775_28563 [Aegilops tauschii]     91   1e-16
ref|XP_002454346.1| hypothetical protein SORBIDRAFT_04g029150 [S...    90   3e-16
dbj|BAK07053.1| predicted protein [Hordeum vulgare subsp. vulgare]     89   6e-16
ref|XP_006647835.1| PREDICTED: transcriptional regulator ATRX ho...    88   1e-15
gb|EMS58393.1| hypothetical protein TRIUR3_03913 [Triticum urartu]     87   3e-15
ref|XP_003570454.1| PREDICTED: uncharacterized protein LOC100824...    87   3e-15
ref|XP_003570453.1| PREDICTED: uncharacterized protein LOC100824...    87   3e-15
ref|XP_004156132.1| PREDICTED: ribosomal RNA-processing protein ...    85   1e-14
ref|XP_004156131.1| PREDICTED: ribosomal RNA-processing protein ...    85   1e-14
ref|XP_004140428.1| PREDICTED: ribosomal RNA-processing protein ...    85   1e-14
ref|XP_004140427.1| PREDICTED: ribosomal RNA-processing protein ...    85   1e-14
ref|XP_002305975.2| hypothetical protein POPTR_0004s10670g [Popu...    84   1e-14
gb|EEE57732.1| hypothetical protein OsJ_08243 [Oryza sativa Japo...    84   1e-14
gb|EEC73928.1| hypothetical protein OsI_08786 [Oryza sativa Indi...    84   1e-14
gb|EOY04356.1| Uncharacterized protein isoform 1 [Theobroma caca...    84   2e-14

>ref|XP_004953786.1| PREDICTED: transcriptional regulator ATRX homolog isoform X2
           [Setaria italica]
          Length = 372

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 49/79 (62%), Positives = 57/79 (72%)
 Frame = +2

Query: 5   DLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           D H S   + L     V     +EI  VDEDSS GM+KWI +YKQNRPGLK+LQERIDEF
Sbjct: 205 DKHASSKENNLERHVEVGTANANEIPSVDEDSSRGMKKWILEYKQNRPGLKVLQERIDEF 264

Query: 185 IIAHEAQLEKEKKEREAQA 241
           I+AHE Q EKE+KEREA+A
Sbjct: 265 IVAHEEQQEKERKEREARA 283


>ref|XP_004953785.1| PREDICTED: transcriptional regulator ATRX homolog isoform X1
           [Setaria italica]
          Length = 375

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 49/79 (62%), Positives = 57/79 (72%)
 Frame = +2

Query: 5   DLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           D H S   + L     V     +EI  VDEDSS GM+KWI +YKQNRPGLK+LQERIDEF
Sbjct: 208 DKHASSKENNLERHVEVGTANANEIPSVDEDSSRGMKKWILEYKQNRPGLKVLQERIDEF 267

Query: 185 IIAHEAQLEKEKKEREAQA 241
           I+AHE Q EKE+KEREA+A
Sbjct: 268 IVAHEEQQEKERKEREARA 286


>ref|NP_001132133.1| uncharacterized protein LOC100193550 [Zea mays]
           gi|194693522|gb|ACF80845.1| unknown [Zea mays]
          Length = 372

 Score = 95.9 bits (237), Expect = 5e-18
 Identities = 52/80 (65%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = +2

Query: 5   DLHIS-KNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDE 181
           D H S K+N+ L     V A   DEI LVDED S GM+KWI +YKQ RPGLK LQE IDE
Sbjct: 204 DKHASRKDNNNLEGHVDVSAANADEIPLVDEDCSRGMKKWILEYKQKRPGLKALQEAIDE 263

Query: 182 FIIAHEAQLEKEKKEREAQA 241
           FI+AHE Q EKEKKEREA+A
Sbjct: 264 FIVAHEEQQEKEKKEREARA 283


>ref|NP_001048002.1| Os02g0728700 [Oryza sativa Japonica Group]
           gi|46390839|dbj|BAD16343.1| unknown protein [Oryza
           sativa Japonica Group] gi|113537533|dbj|BAF09916.1|
           Os02g0728700 [Oryza sativa Japonica Group]
          Length = 366

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 47/79 (59%), Positives = 57/79 (72%)
 Frame = +2

Query: 5   DLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           D H S   ++L     VD   VDEI  VDED S GM+KW+ +YKQ RPGLK+LQ+RIDEF
Sbjct: 199 DKHESSRENKLDRHGEVDTANVDEIQSVDEDCSRGMKKWVLEYKQKRPGLKVLQQRIDEF 258

Query: 185 IIAHEAQLEKEKKEREAQA 241
           I AHE Q E+E+KEREA+A
Sbjct: 259 ITAHEEQEEQERKEREARA 277


>gb|ACG35331.1| hypothetical protein [Zea mays]
          Length = 372

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 51/80 (63%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = +2

Query: 5   DLHIS-KNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDE 181
           D H S K+N+ L     V     DEI LVDED S GM+KWI +YKQ RPGLK LQE IDE
Sbjct: 204 DKHASRKDNNNLERHVDVSTANADEIPLVDEDCSRGMKKWILEYKQKRPGLKALQEAIDE 263

Query: 182 FIIAHEAQLEKEKKEREAQA 241
           FI+AHE Q EKEKKEREA+A
Sbjct: 264 FIVAHEEQQEKEKKEREARA 283


>gb|EMT01183.1| hypothetical protein F775_28563 [Aegilops tauschii]
          Length = 433

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 46/80 (57%), Positives = 57/80 (71%)
 Frame = +2

Query: 2   IDLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDE 181
           ID+ +S     L + + VD   VDEI+ VDED S GM+KWI +Y+Q RPGLK+LQ+ ID 
Sbjct: 264 IDMQVSVREDNLEV-HEVDTANVDEIASVDEDCSRGMKKWILEYRQKRPGLKVLQQNIDV 322

Query: 182 FIIAHEAQLEKEKKEREAQA 241
           FI AHE Q E+EKKEREA A
Sbjct: 323 FITAHEEQQEREKKEREAAA 342


>ref|XP_002454346.1| hypothetical protein SORBIDRAFT_04g029150 [Sorghum bicolor]
           gi|241934177|gb|EES07322.1| hypothetical protein
           SORBIDRAFT_04g029150 [Sorghum bicolor]
          Length = 375

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 49/81 (60%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
 Frame = +2

Query: 5   DLHIS--KNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERID 178
           D H S   NN+ L     V     DEI  VDED S GM+KWI +YK  RPGLK LQERID
Sbjct: 206 DKHASCKDNNNNLERHVEVSTANADEIPSVDEDCSRGMKKWILEYKLKRPGLKALQERID 265

Query: 179 EFIIAHEAQLEKEKKEREAQA 241
           EFI+AHE Q EKE+KEREA+A
Sbjct: 266 EFIVAHEEQQEKERKEREARA 286


>dbj|BAK07053.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 400

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/80 (57%), Positives = 56/80 (70%)
 Frame = +2

Query: 2   IDLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDE 181
           ID  +S     L  ++ VD   VDEI+ VDED S GM+KWI +Y+Q RPGLK+LQ+ ID 
Sbjct: 231 IDTQVSVREDNLE-MHEVDTANVDEIASVDEDCSRGMQKWILEYRQKRPGLKVLQQNIDV 289

Query: 182 FIIAHEAQLEKEKKEREAQA 241
           FI AHE Q E+EKKEREA A
Sbjct: 290 FITAHEEQQEQEKKEREAAA 309


>ref|XP_006647835.1| PREDICTED: transcriptional regulator ATRX homolog [Oryza
           brachyantha]
          Length = 372

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/79 (56%), Positives = 54/79 (68%)
 Frame = +2

Query: 5   DLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           D   S    ++G     D   VD I  VDED S GM+KWI +YKQ RPGLK+LQ+RIDEF
Sbjct: 205 DKDASNKEDKVGRSIEDDNANVDVIESVDEDCSRGMKKWILEYKQKRPGLKVLQQRIDEF 264

Query: 185 IIAHEAQLEKEKKEREAQA 241
           I AHE Q E+E+KEREA+A
Sbjct: 265 ITAHEEQQEQERKEREARA 283


>gb|EMS58393.1| hypothetical protein TRIUR3_03913 [Triticum urartu]
          Length = 432

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 44/79 (55%), Positives = 55/79 (69%)
 Frame = +2

Query: 5   DLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           D+ +S     L + + VD   V EI+ VDED S GM+KWI +Y+Q RPGLK+LQ+ ID F
Sbjct: 264 DMQVSVREDNLEV-HEVDTANVAEIASVDEDCSRGMKKWILEYRQKRPGLKVLQQNIDVF 322

Query: 185 IIAHEAQLEKEKKEREAQA 241
           I AHE Q E+EKKEREA A
Sbjct: 323 ITAHEEQQEREKKEREAAA 341


>ref|XP_003570454.1| PREDICTED: uncharacterized protein LOC100824086 isoform 2
           [Brachypodium distachyon]
          Length = 370

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 45/79 (56%), Positives = 52/79 (65%)
 Frame = +2

Query: 5   DLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           D H S   + L     VD   VDEI  V+ED S GM KWI +Y+Q RPGLK+LQ+RIDEF
Sbjct: 203 DRHASTTENNLERNVEVDVADVDEIPSVNEDFSRGMNKWILEYRQKRPGLKVLQQRIDEF 262

Query: 185 IIAHEAQLEKEKKEREAQA 241
           I  HE Q EKEKKE+E  A
Sbjct: 263 ITLHEEQQEKEKKEKEEAA 281


>ref|XP_003570453.1| PREDICTED: uncharacterized protein LOC100824086 isoform 1
           [Brachypodium distachyon]
          Length = 372

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 45/79 (56%), Positives = 52/79 (65%)
 Frame = +2

Query: 5   DLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           D H S   + L     VD   VDEI  V+ED S GM KWI +Y+Q RPGLK+LQ+RIDEF
Sbjct: 205 DRHASTTENNLERNVEVDVADVDEIPSVNEDFSRGMNKWILEYRQKRPGLKVLQQRIDEF 264

Query: 185 IIAHEAQLEKEKKEREAQA 241
           I  HE Q EKEKKE+E  A
Sbjct: 265 ITLHEEQQEKEKKEKEEAA 283


>ref|XP_004156132.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 2 [Cucumis sativus]
          Length = 261

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/75 (56%), Positives = 58/75 (77%)
 Frame = +2

Query: 17  SKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEFIIAH 196
           +K ++EL     +D   V +IS  D+DSS GM++WI +Y ++RPGL +LQ+RID++I AH
Sbjct: 100 AKGSTELH--EDIDENDVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAH 157

Query: 197 EAQLEKEKKEREAQA 241
           EAQLE+EKKEREAQA
Sbjct: 158 EAQLEQEKKEREAQA 172


>ref|XP_004156131.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 1 [Cucumis sativus]
          Length = 268

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/75 (56%), Positives = 58/75 (77%)
 Frame = +2

Query: 17  SKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEFIIAH 196
           +K ++EL     +D   V +IS  D+DSS GM++WI +Y ++RPGL +LQ+RID++I AH
Sbjct: 107 AKGSTELH--EDIDENDVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAH 164

Query: 197 EAQLEKEKKEREAQA 241
           EAQLE+EKKEREAQA
Sbjct: 165 EAQLEQEKKEREAQA 179


>ref|XP_004140428.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 2 [Cucumis sativus]
          Length = 261

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/75 (56%), Positives = 58/75 (77%)
 Frame = +2

Query: 17  SKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEFIIAH 196
           +K ++EL     +D   V +IS  D+DSS GM++WI +Y ++RPGL +LQ+RID++I AH
Sbjct: 100 AKGSTELH--EDIDENDVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAH 157

Query: 197 EAQLEKEKKEREAQA 241
           EAQLE+EKKEREAQA
Sbjct: 158 EAQLEQEKKEREAQA 172


>ref|XP_004140427.1| PREDICTED: ribosomal RNA-processing protein 7 homolog A-like
           isoform 1 [Cucumis sativus]
          Length = 268

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 42/75 (56%), Positives = 58/75 (77%)
 Frame = +2

Query: 17  SKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEFIIAH 196
           +K ++EL     +D   V +IS  D+DSS GM++WI +Y ++RPGL +LQ+RID++I AH
Sbjct: 107 AKGSTELH--EDIDENDVYQISSGDDDSSKGMKRWITEYHKSRPGLNVLQQRIDDYITAH 164

Query: 197 EAQLEKEKKEREAQA 241
           EAQLE+EKKEREAQA
Sbjct: 165 EAQLEQEKKEREAQA 179


>ref|XP_002305975.2| hypothetical protein POPTR_0004s10670g [Populus trichocarpa]
           gi|550340762|gb|EEE86486.2| hypothetical protein
           POPTR_0004s10670g [Populus trichocarpa]
          Length = 295

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 38/55 (69%), Positives = 48/55 (87%)
 Frame = +2

Query: 77  ISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEFIIAHEAQLEKEKKEREAQA 241
           IS VDED S GM+KW+ DY Q+RPGLK+LQ+R+DEFII+HE +LE+E+KERE QA
Sbjct: 152 ISSVDEDCSKGMKKWLTDYHQSRPGLKVLQQRLDEFIISHEEKLEQERKEREDQA 206


>gb|EEE57732.1| hypothetical protein OsJ_08243 [Oryza sativa Japonica Group]
          Length = 324

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/77 (54%), Positives = 52/77 (67%)
 Frame = +2

Query: 5   DLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           D H S   ++L     VD   VDEI  VDED S GM+KW+ +YKQ RPGLK+LQ+RIDEF
Sbjct: 245 DKHESSRENKLDRHGEVDTANVDEIQSVDEDCSRGMKKWVLEYKQKRPGLKVLQQRIDEF 304

Query: 185 IIAHEAQLEKEKKEREA 235
           I AHE Q E+ +K  +A
Sbjct: 305 ITAHEEQEEQGRKMAKA 321


>gb|EEC73928.1| hypothetical protein OsI_08786 [Oryza sativa Indica Group]
          Length = 214

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 42/77 (54%), Positives = 52/77 (67%)
 Frame = +2

Query: 5   DLHISKNNSELGILNTVDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           D H S   ++L     VD   VDEI  VDED S GM+KW+ +YKQ RPGLK+LQ+RIDEF
Sbjct: 135 DKHESSRENKLDRHGEVDTANVDEIQSVDEDCSRGMKKWVLEYKQKRPGLKVLQQRIDEF 194

Query: 185 IIAHEAQLEKEKKEREA 235
           I AHE Q E+ +K  +A
Sbjct: 195 ITAHEEQEEQGRKMAKA 211


>gb|EOY04356.1| Uncharacterized protein isoform 1 [Theobroma cacao]
           gi|508712460|gb|EOY04357.1| Uncharacterized protein
           isoform 1 [Theobroma cacao] gi|508712461|gb|EOY04358.1|
           Uncharacterized protein isoform 1 [Theobroma cacao]
           gi|508712462|gb|EOY04359.1| Uncharacterized protein
           isoform 1 [Theobroma cacao] gi|508712463|gb|EOY04360.1|
           Uncharacterized protein isoform 1 [Theobroma cacao]
           gi|508712464|gb|EOY04361.1| Uncharacterized protein
           isoform 1 [Theobroma cacao] gi|508712465|gb|EOY04362.1|
           Uncharacterized protein isoform 1 [Theobroma cacao]
           gi|508712466|gb|EOY04363.1| Uncharacterized protein
           isoform 1 [Theobroma cacao] gi|508712467|gb|EOY04364.1|
           Uncharacterized protein isoform 1 [Theobroma cacao]
          Length = 238

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = +2

Query: 11  HISKNNSELGILNT--VDAIKVDEISLVDEDSSCGMRKWINDYKQNRPGLKILQERIDEF 184
           H S   ++L +  +   D  +V EI   DED S GM+KW+ +Y Q+RPGLK+LQ+RIDEF
Sbjct: 72  HSSSGENQLLVEKSKAADKDEVYEIPSGDEDCSQGMKKWVIEYHQSRPGLKVLQQRIDEF 131

Query: 185 IIAHEAQLEKEKKEREA 235
           IIAHEA+LE+E+KEREA
Sbjct: 132 IIAHEAKLEQERKEREA 148


Top