BLASTX nr result

ID: Zingiber24_contig00038851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00038851
         (277 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004294989.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   129   5e-28
ref|XP_003564206.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   125   6e-27
ref|XP_006411510.1| hypothetical protein EUTSA_v10016388mg [Eutr...   125   8e-27
gb|EMT03384.1| DEAD-box ATP-dependent RNA helicase 37 [Aegilops ...   124   2e-26
gb|EMS67020.1| DEAD-box ATP-dependent RNA helicase 37 [Triticum ...   124   2e-26
ref|XP_001774212.1| predicted protein [Physcomitrella patens] gi...   124   2e-26
ref|XP_006650754.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   123   2e-26
ref|XP_004228610.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   123   2e-26
gb|ADD65372.1| DEAD box ATP-dependent RNA helicase [Scutellaria ...   123   3e-26
gb|EPS58220.1| hypothetical protein M569_16595, partial [Genlise...   122   4e-26
gb|EMS54351.1| DEAD-box ATP-dependent RNA helicase 52C [Triticum...   122   4e-26
ref|XP_006354152.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   122   5e-26
gb|EMT07342.1| DEAD-box ATP-dependent RNA helicase 52C [Aegilops...   122   5e-26
ref|XP_006293841.1| hypothetical protein CARUB_v10022826mg [Caps...   121   8e-26
ref|XP_003577389.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   121   8e-26
ref|XP_002879990.1| hypothetical protein ARALYDRAFT_483345 [Arab...   121   8e-26
ref|NP_001051626.1| Os03g0805200 [Oryza sativa Japonica Group] g...   121   8e-26
ref|NP_181780.1| DEAD-box ATP-dependent RNA helicase 37 [Arabido...   121   8e-26
ref|XP_006663583.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   121   1e-25
ref|XP_004955769.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   120   1e-25

>ref|XP_004294989.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Fragaria
           vesca subsp. vesca]
          Length = 622

 Score =  129 bits (323), Expect = 5e-28
 Identities = 62/91 (68%), Positives = 74/91 (81%)
 Frame = -3

Query: 275 ERCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPY 96
           +RC+Y KPTP +RHA+PI +AGRDLMACAQTGSGKTAAFCFPII GIMK    PP  PP 
Sbjct: 174 QRCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQ--PPQRPPR 231

Query: 95  CSSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
             +A P AL+LSP  EL++QI++EAKKF+YQ
Sbjct: 232 SHTACPLALILSPTRELSSQIHEEAKKFSYQ 262


>ref|XP_003564206.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like
           [Brachypodium distachyon]
          Length = 637

 Score =  125 bits (314), Expect = 6e-27
 Identities = 61/90 (67%), Positives = 72/90 (80%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y +PTP +RHA+PI+I GRDLMACAQTGSGKTAAFCFPII GIMK    PP  P   
Sbjct: 193 RCKYVRPTPVQRHAIPIVIGGRDLMACAQTGSGKTAAFCFPIISGIMKS--RPPQRPRGS 250

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +A+P AL+LSP  EL+ QI++EAKKFAYQ
Sbjct: 251 RTAYPLALILSPTRELSVQIHEEAKKFAYQ 280


>ref|XP_006411510.1| hypothetical protein EUTSA_v10016388mg [Eutrema salsugineum]
           gi|557112679|gb|ESQ52963.1| hypothetical protein
           EUTSA_v10016388mg [Eutrema salsugineum]
          Length = 621

 Score =  125 bits (313), Expect = 8e-27
 Identities = 60/90 (66%), Positives = 72/90 (80%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y KPTP +RHA+PIL+ GRDLMACAQTGSGKTAAFCFPII GIMK P +    P   
Sbjct: 172 RCKYVKPTPVQRHAIPILLGGRDLMACAQTGSGKTAAFCFPIISGIMKDPHV--QRPRGT 229

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            + +P A++LSP  ELA+QI+DEAKKF+YQ
Sbjct: 230 RTVYPLAVILSPTRELASQIHDEAKKFSYQ 259


>gb|EMT03384.1| DEAD-box ATP-dependent RNA helicase 37 [Aegilops tauschii]
          Length = 1065

 Score =  124 bits (310), Expect = 2e-26
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y +PTP +RHA+PI+I GRDLMACAQTGSGKTAAFCFPII GI+K     P   P  
Sbjct: 623 RCKYVRPTPVQRHAIPIVIGGRDLMACAQTGSGKTAAFCFPIISGILKS---RPPQRPRA 679

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +AFP AL+LSP  EL+ QI++EAKKFAYQ
Sbjct: 680 RTAFPLALILSPTRELSVQIHEEAKKFAYQ 709


>gb|EMS67020.1| DEAD-box ATP-dependent RNA helicase 37 [Triticum urartu]
          Length = 646

 Score =  124 bits (310), Expect = 2e-26
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y +PTP +RHA+PI+I GRDLMACAQTGSGKTAAFCFPII GI+K     P   P  
Sbjct: 204 RCKYVRPTPVQRHAIPIVIGGRDLMACAQTGSGKTAAFCFPIISGILKS---RPPQRPRA 260

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +AFP AL+LSP  EL+ QI++EAKKFAYQ
Sbjct: 261 RTAFPLALILSPTRELSVQIHEEAKKFAYQ 290


>ref|XP_001774212.1| predicted protein [Physcomitrella patens]
           gi|162674480|gb|EDQ60988.1| predicted protein
           [Physcomitrella patens]
          Length = 584

 Score =  124 bits (310), Expect = 2e-26
 Identities = 62/90 (68%), Positives = 69/90 (76%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+YTKPTP +RHA+PI + GRDLMACAQTGSGKTAAFCFPII GIM+    PP  P   
Sbjct: 153 RCKYTKPTPVQRHAIPISLNGRDLMACAQTGSGKTAAFCFPIIAGIMRN--TPPGRPRGG 210

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
             A P AL+LSP  EL +QI DEAKKFAYQ
Sbjct: 211 RKALPLALILSPTRELTSQISDEAKKFAYQ 240


>ref|XP_006650754.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like [Oryza
           brachyantha]
          Length = 635

 Score =  123 bits (309), Expect = 2e-26
 Identities = 61/90 (67%), Positives = 72/90 (80%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y KPTP +R+A+PI IAGRDLMACAQTGSGKTAAFCFPII GIMK    PP  P   
Sbjct: 195 RCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMKS--RPPQRPRGS 252

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +A+P AL+LSP  EL+ QI++EA+KFAYQ
Sbjct: 253 RTAYPLALILSPTRELSVQIHEEARKFAYQ 282


>ref|XP_004228610.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like isoform 1
           [Solanum lycopersicum] gi|460365443|ref|XP_004228611.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 37-like
           isoform 2 [Solanum lycopersicum]
          Length = 604

 Score =  123 bits (309), Expect = 2e-26
 Identities = 63/91 (69%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMK-QPPLPPTDPPY 96
           RC+Y KPTP +RHA+PI +AGRDLMACAQTGSGKTAAFCFPII GIM+ Q P PP     
Sbjct: 161 RCKYVKPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQFPRPPRP--- 217

Query: 95  CSSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
              AFP AL+LSP  EL+ QI+DEAKKF+YQ
Sbjct: 218 -RMAFPLALILSPTRELSCQIHDEAKKFSYQ 247


>gb|ADD65372.1| DEAD box ATP-dependent RNA helicase [Scutellaria baicalensis]
          Length = 233

 Score =  123 bits (308), Expect = 3e-26
 Identities = 60/93 (64%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
 Frame = -3

Query: 275 ERCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPP--TDP 102
           +RC+Y KPTP +RHA+PI + GRDLMACAQTGSGKTAAFCFPII GIMK     P  +  
Sbjct: 22  KRCKYVKPTPVQRHAIPIALTGRDLMACAQTGSGKTAAFCFPIISGIMKMNQSDPRQSRT 81

Query: 101 PYCSSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            Y   AFP+AL+LSP  EL+ QI++EA+KFAYQ
Sbjct: 82  TYPRMAFPFALILSPTRELSIQIHEEARKFAYQ 114


>gb|EPS58220.1| hypothetical protein M569_16595, partial [Genlisea aurea]
          Length = 545

 Score =  122 bits (307), Expect = 4e-26
 Identities = 61/92 (66%), Positives = 74/92 (80%), Gaps = 1/92 (1%)
 Frame = -3

Query: 275 ERCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPY 96
           +RC+Y KPTP +R+A+PI +AGRDLMACAQTGSGKTAAFCFPII GIM+ P  PP  P  
Sbjct: 143 QRCKYVKPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGP--PPMRPRG 200

Query: 95  CSSA-FPYALLLSPAMELANQIYDEAKKFAYQ 3
             SA +P AL+L+P  EL+ QI+DEA+KFAYQ
Sbjct: 201 ARSAVYPLALILAPTRELSMQIHDEARKFAYQ 232


>gb|EMS54351.1| DEAD-box ATP-dependent RNA helicase 52C [Triticum urartu]
          Length = 612

 Score =  122 bits (307), Expect = 4e-26
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y +PTP +RHA+PI +AGRDLMACAQTGSGKTAAFCFPII GIM+ PP+  +     
Sbjct: 127 RCKYVRPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPMQRSQRGGS 186

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +A P AL+LSP  EL+ QI++EA+KF+YQ
Sbjct: 187 RTACPLALILSPTRELSMQIHEEARKFSYQ 216


>ref|XP_006354152.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like isoform X1
           [Solanum tuberosum] gi|565375265|ref|XP_006354153.1|
           PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like
           isoform X2 [Solanum tuberosum]
          Length = 604

 Score =  122 bits (306), Expect = 5e-26
 Identities = 62/91 (68%), Positives = 72/91 (79%), Gaps = 1/91 (1%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMK-QPPLPPTDPPY 96
           RC+Y +PTP +RHA+PI +AGRDLMACAQTGSGKTAAFCFPII GIM+ Q P PP     
Sbjct: 161 RCKYVRPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGQFPRPPRP--- 217

Query: 95  CSSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
              AFP AL+LSP  EL+ QI+DEAKKF+YQ
Sbjct: 218 -RMAFPLALILSPTRELSCQIHDEAKKFSYQ 247


>gb|EMT07342.1| DEAD-box ATP-dependent RNA helicase 52C [Aegilops tauschii]
          Length = 729

 Score =  122 bits (306), Expect = 5e-26
 Identities = 57/90 (63%), Positives = 72/90 (80%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y +PTP +RHA+PI +AGRDLMACAQTGSGKTAAFCFPII GIM+ PP+  +     
Sbjct: 159 RCKYVRPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPVQRSQRGGS 218

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +A P AL+LSP  EL+ QI++EA+KF+YQ
Sbjct: 219 RTACPLALILSPTRELSMQIHEEARKFSYQ 248


>ref|XP_006293841.1| hypothetical protein CARUB_v10022826mg [Capsella rubella]
           gi|482562549|gb|EOA26739.1| hypothetical protein
           CARUB_v10022826mg [Capsella rubella]
          Length = 624

 Score =  121 bits (304), Expect = 8e-26
 Identities = 59/90 (65%), Positives = 71/90 (78%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y KPTP +RHA+PIL+ GRDLMACAQTGSGKTAAFCFPII GIMK   +    P   
Sbjct: 172 RCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHV--QRPRGS 229

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            + +P A++LSP  ELA+QI+DEAKKF+YQ
Sbjct: 230 RTVYPLAVILSPTRELASQIHDEAKKFSYQ 259


>ref|XP_003577389.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52C-like
           [Brachypodium distachyon]
          Length = 609

 Score =  121 bits (304), Expect = 8e-26
 Identities = 57/90 (63%), Positives = 71/90 (78%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y +PTP +RHA+PI +AGRDLMACAQTGSGKTAAFCFPII GIM+ PP+        
Sbjct: 158 RCKYVRPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPVQRPQRGGS 217

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +A P AL+LSP  EL+ QI++EA+KF+YQ
Sbjct: 218 RTACPLALILSPTRELSMQIHEEARKFSYQ 247


>ref|XP_002879990.1| hypothetical protein ARALYDRAFT_483345 [Arabidopsis lyrata subsp.
           lyrata] gi|297325829|gb|EFH56249.1| hypothetical protein
           ARALYDRAFT_483345 [Arabidopsis lyrata subsp. lyrata]
          Length = 627

 Score =  121 bits (304), Expect = 8e-26
 Identities = 59/90 (65%), Positives = 71/90 (78%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y KPTP +RHA+PIL+ GRDLMACAQTGSGKTAAFCFPII GIMK   +    P   
Sbjct: 174 RCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHV--QRPRGS 231

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            + +P A++LSP  ELA+QI+DEAKKF+YQ
Sbjct: 232 RTVYPLAVILSPTRELASQIHDEAKKFSYQ 261


>ref|NP_001051626.1| Os03g0805200 [Oryza sativa Japonica Group]
           gi|75326432|sp|Q75HJ0.1|RH37_ORYSJ RecName:
           Full=DEAD-box ATP-dependent RNA helicase 37; AltName:
           Full=OsPL10a gi|41469394|gb|AAS07217.1| putative
           helicase [Oryza sativa Japonica Group]
           gi|108711635|gb|ABF99430.1| ATP-dependent RNA helicase
           An3, putative, expressed [Oryza sativa Japonica Group]
           gi|113550097|dbj|BAF13540.1| Os03g0805200 [Oryza sativa
           Japonica Group] gi|222626000|gb|EEE60132.1| hypothetical
           protein OsJ_13017 [Oryza sativa Japonica Group]
          Length = 637

 Score =  121 bits (304), Expect = 8e-26
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y KPTP +R+A+PI IAGRDLMACAQTGSGKTAAFCFPII GIM     PP  P   
Sbjct: 191 RCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGIMSS--RPPQRPRGS 248

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +A+P AL+LSP  EL+ QI++EA+KFAYQ
Sbjct: 249 RTAYPLALILSPTRELSVQIHEEARKFAYQ 278


>ref|NP_181780.1| DEAD-box ATP-dependent RNA helicase 37 [Arabidopsis thaliana]
           gi|108861890|sp|Q84W89.2|RH37_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 37
           gi|4559339|gb|AAD23001.1| putative ATP-dependent RNA
           helicase [Arabidopsis thaliana]
           gi|330255039|gb|AEC10133.1| DEAD-box ATP-dependent RNA
           helicase 37 [Arabidopsis thaliana]
          Length = 633

 Score =  121 bits (304), Expect = 8e-26
 Identities = 59/90 (65%), Positives = 71/90 (78%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y KPTP +RHA+PIL+ GRDLMACAQTGSGKTAAFCFPII GIMK   +    P   
Sbjct: 176 RCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHV--QRPRGS 233

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            + +P A++LSP  ELA+QI+DEAKKF+YQ
Sbjct: 234 RTVYPLAVILSPTRELASQIHDEAKKFSYQ 263


>ref|XP_006663583.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52C-like, partial
           [Oryza brachyantha]
          Length = 529

 Score =  121 bits (303), Expect = 1e-25
 Identities = 58/90 (64%), Positives = 70/90 (77%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y +PTP +R+A+PI +AGRDLMACAQTGSGKTAAFCFPII GIM+ PP         
Sbjct: 78  RCKYVRPTPVQRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMRGPPAQRPQRGGM 137

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +A P AL+LSP  EL+ QI+DEAKKF+YQ
Sbjct: 138 RTACPLALILSPTRELSMQIHDEAKKFSYQ 167


>ref|XP_004955769.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Setaria
           italica]
          Length = 649

 Score =  120 bits (302), Expect = 1e-25
 Identities = 60/90 (66%), Positives = 71/90 (78%)
 Frame = -3

Query: 272 RCRYTKPTPGERHAMPILIAGRDLMACAQTGSGKTAAFCFPIICGIMKQPPLPPTDPPYC 93
           RC+Y KPTP +R+A+PI IAGRDLMACAQTGSGKTAAFCFPII GI+K    PP  P   
Sbjct: 194 RCKYVKPTPVQRYAIPISIAGRDLMACAQTGSGKTAAFCFPIISGILKS--RPPQRPRSS 251

Query: 92  SSAFPYALLLSPAMELANQIYDEAKKFAYQ 3
            +A P AL+LSP  EL+ QI++EA+KFAYQ
Sbjct: 252 RTACPLALILSPTRELSVQIHEEARKFAYQ 281


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