BLASTX nr result
ID: Zingiber24_contig00038778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038778
(453 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EEE64923.1| hypothetical protein OsJ_19783 [Oryza sativa Japo... 107 2e-21
gb|EEC79808.1| hypothetical protein OsI_21247 [Oryza sativa Indi... 107 2e-21
emb|CAD59412.1| SMC5 protein [Oryza sativa] 106 3e-21
ref|NP_001056521.1| Os05g0596600 [Oryza sativa Japonica Group] g... 106 3e-21
ref|XP_006655666.1| PREDICTED: structural maintenance of chromos... 104 1e-20
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos... 103 3e-20
ref|XP_006482925.1| PREDICTED: LOW QUALITY PROTEIN: structural m... 102 4e-20
ref|XP_006438957.1| hypothetical protein CICLE_v10030582mg [Citr... 102 4e-20
ref|XP_003567770.1| PREDICTED: structural maintenance of chromos... 102 4e-20
gb|AFW69144.1| hypothetical protein ZEAMMB73_607794 [Zea mays] 102 5e-20
gb|AFW69143.1| hypothetical protein ZEAMMB73_607794 [Zea mays] 102 5e-20
gb|AFW69142.1| hypothetical protein ZEAMMB73_607794 [Zea mays] 102 5e-20
ref|NP_001167901.1| uncharacterized protein LOC100381612 [Zea ma... 102 5e-20
ref|XP_006369613.1| hypothetical protein POPTR_0001s269802g [Pop... 101 1e-19
gb|EOY10138.1| Structural maintenance of chromosomes 5 smc5, put... 101 1e-19
gb|EMJ21787.1| hypothetical protein PRUPE_ppa000655mg [Prunus pe... 100 2e-19
ref|XP_002438893.1| hypothetical protein SORBIDRAFT_10g027780 [S... 100 3e-19
gb|EXB95294.1| hypothetical protein L484_007938 [Morus notabilis] 99 8e-19
ref|XP_006345408.1| PREDICTED: structural maintenance of chromos... 99 8e-19
ref|XP_004229659.1| PREDICTED: structural maintenance of chromos... 99 8e-19
>gb|EEE64923.1| hypothetical protein OsJ_19783 [Oryza sativa Japonica Group]
Length = 1103
Score = 107 bits (266), Expect = 2e-21
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLA 168
SQPNTPQCFLLTPKLLP+LEY+DACSILN+MNGPW EK AKAWS G CWRTV+ ++
Sbjct: 1008 SQPNTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEKPAKAWSTGDCWRTVMSIS 1063
>gb|EEC79808.1| hypothetical protein OsI_21247 [Oryza sativa Indica Group]
Length = 1179
Score = 107 bits (266), Expect = 2e-21
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLA 168
SQPNTPQCFLLTPKLLP+LEY+DACSILN+MNGPW EK AKAWS G CWRTV+ ++
Sbjct: 1084 SQPNTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEKPAKAWSTGDCWRTVMSIS 1139
>emb|CAD59412.1| SMC5 protein [Oryza sativa]
Length = 1056
Score = 106 bits (265), Expect = 3e-21
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLA 168
SQPNTPQCFLLTPKLLP+LEY+DACSILN+MNGPW EK AKAWS G CWRTV+ ++
Sbjct: 999 SQPNTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEKPAKAWSTGDCWRTVMSVS 1054
>ref|NP_001056521.1| Os05g0596600 [Oryza sativa Japonica Group] gi|57900674|gb|AAW57799.1|
putative SMC5 protein [Oryza sativa Japonica Group]
gi|113580072|dbj|BAF18435.1| Os05g0596600 [Oryza sativa
Japonica Group] gi|215768112|dbj|BAH00341.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 1065
Score = 106 bits (265), Expect = 3e-21
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLA 168
SQPNTPQCFLLTPKLLP+LEY+DACSILN+MNGPW EK AKAWS G CWRTV+ ++
Sbjct: 1008 SQPNTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEKPAKAWSTGDCWRTVMSVS 1063
>ref|XP_006655666.1| PREDICTED: structural maintenance of chromosomes protein 5-like
[Oryza brachyantha]
Length = 1055
Score = 104 bits (259), Expect = 1e-20
Identities = 44/56 (78%), Positives = 50/56 (89%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLA 168
SQP TPQCFLLTPKLLP+LEY+DACSILN+MNGPW EK AKAWS G CWRTV+ ++
Sbjct: 998 SQPKTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEKPAKAWSTGDCWRTVMSVS 1053
>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
product [Vitis vinifera]
Length = 1051
Score = 103 bits (256), Expect = 3e-20
Identities = 43/59 (72%), Positives = 51/59 (86%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLAEES 177
SQPNTPQCFLLTPKLLP+LEY++ACSILN+MNGPW E+ +K WS G CW TV+GL +S
Sbjct: 991 SQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWSNGDCWGTVVGLLGKS 1049
>ref|XP_006482925.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes
protein 5-like [Citrus sinensis]
Length = 1055
Score = 102 bits (255), Expect = 4e-20
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLAEES 177
SQPNTPQCFLLTPKLLP+LEY++ACSILN+MNGPW E+ +K WS G CW TV GL ES
Sbjct: 995 SQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWSSGECWGTVTGLVGES 1053
>ref|XP_006438957.1| hypothetical protein CICLE_v10030582mg [Citrus clementina]
gi|557541153|gb|ESR52197.1| hypothetical protein
CICLE_v10030582mg [Citrus clementina]
Length = 1051
Score = 102 bits (255), Expect = 4e-20
Identities = 44/59 (74%), Positives = 50/59 (84%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLAEES 177
SQPNTPQCFLLTPKLLP+LEY++ACSILN+MNGPW E+ +K WS G CW TV GL ES
Sbjct: 991 SQPNTPQCFLLTPKLLPDLEYSEACSILNIMNGPWIEQPSKVWSSGECWGTVTGLVGES 1049
>ref|XP_003567770.1| PREDICTED: structural maintenance of chromosomes protein 5-like
[Brachypodium distachyon]
Length = 1058
Score = 102 bits (255), Expect = 4e-20
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGL 165
SQPNTPQCFLLTPKLLP+LEY+DACSILN+MNGPW EK A+AW G CWRTV+ +
Sbjct: 1001 SQPNTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEKPAQAWRAGDCWRTVMSV 1055
>gb|AFW69144.1| hypothetical protein ZEAMMB73_607794 [Zea mays]
Length = 1057
Score = 102 bits (254), Expect = 5e-20
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLA 168
SQ NTPQCFLLTPKLLP+LEY+DACSILN+MNGPW E+ AKAWS G CWRTV+ A
Sbjct: 1000 SQINTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEEPAKAWSSGDCWRTVVSAA 1055
>gb|AFW69143.1| hypothetical protein ZEAMMB73_607794 [Zea mays]
Length = 1057
Score = 102 bits (254), Expect = 5e-20
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLA 168
SQ NTPQCFLLTPKLLP+LEY+DACSILN+MNGPW E+ AKAWS G CWRTV+ A
Sbjct: 1000 SQINTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEEPAKAWSSGDCWRTVVSAA 1055
>gb|AFW69142.1| hypothetical protein ZEAMMB73_607794 [Zea mays]
Length = 149
Score = 102 bits (254), Expect = 5e-20
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLA 168
SQ NTPQCFLLTPKLLP+LEY+DACSILN+MNGPW E+ AKAWS G CWRTV+ A
Sbjct: 92 SQINTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEEPAKAWSSGDCWRTVVSAA 147
>ref|NP_001167901.1| uncharacterized protein LOC100381612 [Zea mays]
gi|223944737|gb|ACN26452.1| unknown [Zea mays]
Length = 451
Score = 102 bits (254), Expect = 5e-20
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLA 168
SQ NTPQCFLLTPKLLP+LEY+DACSILN+MNGPW E+ AKAWS G CWRTV+ A
Sbjct: 394 SQINTPQCFLLTPKLLPDLEYSDACSILNIMNGPWIEEPAKAWSSGDCWRTVVSAA 449
>ref|XP_006369613.1| hypothetical protein POPTR_0001s269802g [Populus trichocarpa]
gi|550348278|gb|ERP66182.1| hypothetical protein
POPTR_0001s269802g [Populus trichocarpa]
Length = 241
Score = 101 bits (251), Expect = 1e-19
Identities = 44/59 (74%), Positives = 49/59 (83%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLAEES 177
SQPNTPQCFLLTPKLLP LEY++ACSILN+MNGPW E+ +KAWS G CW V GL ES
Sbjct: 181 SQPNTPQCFLLTPKLLPNLEYSEACSILNIMNGPWIEQPSKAWSSGECWGAVTGLLGES 239
>gb|EOY10138.1| Structural maintenance of chromosomes 5 smc5, putative [Theobroma
cacao]
Length = 1051
Score = 101 bits (251), Expect = 1e-19
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLAEES 177
+QPNTPQCFLLTPKLLP LEY++ACSILN+MNGPW E +K WS G CW T+ GL +ES
Sbjct: 991 TQPNTPQCFLLTPKLLPNLEYSEACSILNIMNGPWIEAPSKVWSSGECWGTIAGLVDES 1049
>gb|EMJ21787.1| hypothetical protein PRUPE_ppa000655mg [Prunus persica]
Length = 1051
Score = 100 bits (250), Expect = 2e-19
Identities = 42/59 (71%), Positives = 51/59 (86%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLAEES 177
SQPNTPQCFLLTPKLLP+L+Y++ACSILN+MNGPW ++ AK WS+G CW VIGL +S
Sbjct: 991 SQPNTPQCFLLTPKLLPDLDYSEACSILNIMNGPWIKQPAKVWSQGDCWGNVIGLVGKS 1049
>ref|XP_002438893.1| hypothetical protein SORBIDRAFT_10g027780 [Sorghum bicolor]
gi|241917116|gb|EER90260.1| hypothetical protein
SORBIDRAFT_10g027780 [Sorghum bicolor]
Length = 1057
Score = 99.8 bits (247), Expect = 3e-19
Identities = 41/53 (77%), Positives = 48/53 (90%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVI 159
SQ NTPQCFLLTPKLLP+LEY+DAC++LN+MNGPW E+ AKAWS G CWRTV+
Sbjct: 1000 SQINTPQCFLLTPKLLPDLEYSDACTVLNIMNGPWIEEPAKAWSSGDCWRTVV 1052
>gb|EXB95294.1| hypothetical protein L484_007938 [Morus notabilis]
Length = 1112
Score = 98.6 bits (244), Expect = 8e-19
Identities = 41/59 (69%), Positives = 50/59 (84%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGLAEES 177
SQPNTPQCFLLTPKLLP+LEY++ACSILN++NGPW + +K WS G CWR+V GL E+
Sbjct: 1052 SQPNTPQCFLLTPKLLPDLEYSEACSILNIVNGPWIGQPSKVWSGGDCWRSVAGLVGET 1110
>ref|XP_006345408.1| PREDICTED: structural maintenance of chromosomes protein 5-like
[Solanum tuberosum]
Length = 1050
Score = 98.6 bits (244), Expect = 8e-19
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGL 165
SQPNTPQCFLLTPKLLP LEY++ACSIL VMNGPW E+ +K WS G CWR+++GL
Sbjct: 990 SQPNTPQCFLLTPKLLPNLEYSEACSILTVMNGPWIEQPSKVWSGGECWRSIMGL 1044
>ref|XP_004229659.1| PREDICTED: structural maintenance of chromosomes protein 5-like
[Solanum lycopersicum]
Length = 1050
Score = 98.6 bits (244), Expect = 8e-19
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = +1
Query: 1 SQPNTPQCFLLTPKLLPELEYTDACSILNVMNGPWTEKAAKAWSRGGCWRTVIGL 165
SQPNTPQCFLLTPKLLP LEY++ACSIL VMNGPW E+ +K WS G CWR+++GL
Sbjct: 990 SQPNTPQCFLLTPKLLPNLEYSEACSILTVMNGPWIEQPSKVWSGGECWRSIMGL 1044