BLASTX nr result
ID: Zingiber24_contig00038768
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038768
(886 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,... 82 2e-13
ref|XP_006583587.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-12
ref|XP_004308728.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-12
ref|XP_002317747.2| hypothetical protein POPTR_0012s01390g, part... 76 2e-11
ref|XP_003623067.1| Pentatricopeptide repeat-containing protein ... 74 6e-11
ref|XP_003613759.1| Pentatricopeptide repeat-containing protein ... 73 1e-10
gb|EMJ21218.1| hypothetical protein PRUPE_ppa003879mg [Prunus pe... 73 2e-10
ref|XP_002871717.1| pentatricopeptide repeat-containing protein ... 72 2e-10
ref|XP_006491330.1| PREDICTED: pentatricopeptide repeat-containi... 72 3e-10
gb|EOX95633.1| Pentatricopeptide repeat (PPR-like) superfamily p... 72 4e-10
ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutr... 71 5e-10
ref|XP_006444781.1| hypothetical protein CICLE_v10024306mg [Citr... 71 6e-10
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi... 71 6e-10
ref|NP_197146.1| pentatricopeptide repeat-containing protein [Ar... 70 1e-09
gb|EMT05931.1| hypothetical protein F775_10608 [Aegilops tauschii] 70 1e-09
ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [A... 69 2e-09
gb|ESW12302.1| hypothetical protein PHAVU_008G101200g [Phaseolus... 68 5e-09
ref|XP_006287468.1| hypothetical protein CARUB_v10000680mg [Caps... 68 5e-09
ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containi... 67 7e-09
ref|XP_004492340.1| PREDICTED: pentatricopeptide repeat-containi... 67 9e-09
>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 544
Score = 82.4 bits (202), Expect = 2e-13
Identities = 37/98 (37%), Positives = 65/98 (66%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYN+L+KGFSK G KE ++I +EM++ R +P+K+T+ IL +EL G E+DK++
Sbjct: 446 FTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSM 505
Query: 186 IVSNRGVDQESWFVLVSKILGDDENSRDHINSVLETRA 299
+++ GVD +SW + ++K +G+ + ++S + A
Sbjct: 506 AMASGGVDSDSWDLFLNKAVGNLDRGSKALDSFFKENA 543
>ref|XP_006583587.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like isoform X1 [Glycine max]
gi|571466177|ref|XP_006583588.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like isoform X2 [Glycine max]
Length = 529
Score = 79.3 bits (194), Expect = 2e-12
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELS-SSGDTEELDKILE 182
FTYNVLMKGF K G KE +++ +EMVE +P+K+TF IL D +S S G EE+DK++
Sbjct: 431 FTYNVLMKGFCKVGDVKEAIRVLEEMVESGCLPNKSTFSILVDGISLSGGKKEEIDKVV- 489
Query: 183 SIVSNRGVDQESWFVLVSKILGDDENSRDHINSVLETRA 299
+ GVD E W + + ++G+ + + ++ +L A
Sbjct: 490 LLAMTTGVDGEWWDLFLKLVVGNLDGNASELDRILTENA 528
>ref|XP_004308728.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like, partial [Fragaria vesca subsp.
vesca]
Length = 506
Score = 79.0 bits (193), Expect = 2e-12
Identities = 35/95 (36%), Positives = 64/95 (67%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYNVL+KGF K K E ++I DEM+EK +P+K+T+ +L + L SG+ E+++++
Sbjct: 408 FTYNVLIKGFCKIKKATEGIRILDEMLEKGCLPNKSTYAMLMEGLCDSGEEAEINRLISM 467
Query: 186 IVSNRGVDQESWFVLVSKILGDDENSRDHINSVLE 290
+S+ VD +SW + ++K++ D ++ +N +L+
Sbjct: 468 AMSSGHVDSDSWDLFLTKVVCDLDSGESVLNRILQ 502
>ref|XP_002317747.2| hypothetical protein POPTR_0012s01390g, partial [Populus
trichocarpa] gi|550326138|gb|EEE95967.2| hypothetical
protein POPTR_0012s01390g, partial [Populus trichocarpa]
Length = 515
Score = 75.9 bits (185), Expect = 2e-11
Identities = 34/82 (41%), Positives = 58/82 (70%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYN+L+KGF KAG KE V+I +EM++ +P+K+T+ +L + L SG ++DK++
Sbjct: 432 FTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVDKVMSM 491
Query: 186 IVSNRGVDQESWFVLVSKILGD 251
+++R VD +SW + + KI+G+
Sbjct: 492 AMASREVDADSWDLFLHKIVGN 513
>ref|XP_003623067.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498082|gb|AES79285.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 647
Score = 74.3 bits (181), Expect = 6e-11
Identities = 35/95 (36%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADE-LSSSGDTEELDKILE 182
FTYN+L+KGF K G KE +++ +EM+E R +P+K+T+ IL D L G +E++K++
Sbjct: 437 FTYNMLIKGFCKVGNAKEGIRVLEEMLENRCLPNKSTYTILIDGILLLGGMKQEINKVV- 495
Query: 183 SIVSNRGVDQESWFVLVSKILGDDENSRDHINSVL 287
S+ + GVD + W + V ++G+D ++ +L
Sbjct: 496 SLAMSTGVDADLWNIFVKPVVGNDNGGEAELDRIL 530
>ref|XP_003613759.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515094|gb|AES96717.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 733
Score = 73.2 bits (178), Expect = 1e-10
Identities = 35/95 (36%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADE-LSSSGDTEELDKILE 182
FTYN+L+KGF K KE +++ +EM+E R P+K+T+ IL D L S G +E++K++
Sbjct: 301 FTYNMLIKGFCKVRNAKEGIRVLEEMLENRCFPNKSTYTILIDGILLSGGMKQEINKVV- 359
Query: 183 SIVSNRGVDQESWFVLVSKILGDDENSRDHINSVL 287
S+ + GVD + W + V ++G+D+ ++ +L
Sbjct: 360 SLAMSTGVDADLWNIFVKPVVGNDDGGAAELDRIL 394
>gb|EMJ21218.1| hypothetical protein PRUPE_ppa003879mg [Prunus persica]
Length = 542
Score = 72.8 bits (177), Expect = 2e-10
Identities = 32/94 (34%), Positives = 61/94 (64%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYN+L+KGF K GK +E +++ +EM++K +P K+T+ +L + L +E+ K++
Sbjct: 444 FTYNMLIKGFCKIGKAEEGIRMLEEMLDKGCLPTKSTYGMLIEGLCDLRKEDEVTKVISL 503
Query: 186 IVSNRGVDQESWFVLVSKILGDDENSRDHINSVL 287
+SN ++ SW +L++K +GD +N ++ +L
Sbjct: 504 AMSNGDIESASWDILLTKFVGDLDNGGAVMDKIL 537
>ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317554|gb|EFH47976.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 533
Score = 72.4 bits (176), Expect = 2e-10
Identities = 36/82 (43%), Positives = 52/82 (63%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYNVL++G SK G KE V++ +EM+E P+K TF IL + L G E+ KI+
Sbjct: 434 FTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIVSM 493
Query: 186 IVSNRGVDQESWFVLVSKILGD 251
V N VD+ESW + ++K +G+
Sbjct: 494 AVMNGKVDKESWELFLNKFVGE 515
>ref|XP_006491330.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Citrus sinensis]
Length = 571
Score = 72.0 bits (175), Expect = 3e-10
Identities = 32/95 (33%), Positives = 61/95 (64%)
Frame = +3
Query: 3 VFTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILE 182
VFTYN+L++GF K G KE ++I +EM++K P+K +F +L + L SG+ E+ K++
Sbjct: 473 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 532
Query: 183 SIVSNRGVDQESWFVLVSKILGDDENSRDHINSVL 287
++ V+ +SW L+++I+ D ++ ++ +L
Sbjct: 533 MATASGSVESDSWNFLLTRIVSDLDSGAGALDELL 567
>gb|EOX95633.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 545
Score = 71.6 bits (174), Expect = 4e-10
Identities = 34/95 (35%), Positives = 58/95 (61%)
Frame = +3
Query: 3 VFTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILE 182
VFTYN+L+KGF K G E ++I +EM++K P+K T+ +L + L G E+ K++
Sbjct: 442 VFTYNMLIKGFCKMGNVMEGIRILEEMLDKGCFPNKVTYSVLIEGLQDMGKEGEVGKVVS 501
Query: 183 SIVSNRGVDQESWFVLVSKILGDDENSRDHINSVL 287
+S VD SW + ++KI+G ++ D ++ +L
Sbjct: 502 MAMSRGRVDGSSWDLFLTKIVGKLDSGVDVLDQLL 536
>ref|XP_006400179.1| hypothetical protein EUTSA_v10013226mg [Eutrema salsugineum]
gi|557101269|gb|ESQ41632.1| hypothetical protein
EUTSA_v10013226mg [Eutrema salsugineum]
Length = 530
Score = 71.2 bits (173), Expect = 5e-10
Identities = 36/82 (43%), Positives = 51/82 (62%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYNVL++G SK G KE V++ +EM+EK P+K TF IL + L G E+ KI+
Sbjct: 431 FTYNVLIEGLSKNGNVKEGVRVLEEMLEKGCFPNKTTFLILFEGLQKLGKEEDAIKIVSM 490
Query: 186 IVSNRGVDQESWFVLVSKILGD 251
V + VD+ESW + + K G+
Sbjct: 491 AVMSGKVDKESWELFLKKFAGE 512
>ref|XP_006444781.1| hypothetical protein CICLE_v10024306mg [Citrus clementina]
gi|557547043|gb|ESR58021.1| hypothetical protein
CICLE_v10024306mg [Citrus clementina]
Length = 537
Score = 70.9 bits (172), Expect = 6e-10
Identities = 31/83 (37%), Positives = 55/83 (66%)
Frame = +3
Query: 3 VFTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILE 182
VFTYN+L++GF K G KE ++I +EM++K P+K +F +L + L SG+ E+ K++
Sbjct: 429 VFTYNMLIQGFCKIGNAKEGIRILEEMLDKGCFPNKTSFSLLIEGLYESGNEGEVGKVVS 488
Query: 183 SIVSNRGVDQESWFVLVSKILGD 251
++ V+ +SW L+++I+ D
Sbjct: 489 MATASGSVESDSWNFLLTRIVSD 511
>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 70.9 bits (172), Expect = 6e-10
Identities = 35/94 (37%), Positives = 58/94 (61%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYN+L+KGF K GK KEV+K+ +EM++K + +++T+ IL + L G EEL IL
Sbjct: 437 FTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSM 496
Query: 186 IVSNRGVDQESWFVLVSKILGDDENSRDHINSVL 287
I+S+ VD ++W + V + + + + +L
Sbjct: 497 IISSGAVDFKAWNLFVPHFVSNVNEQANILEKIL 530
>ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like
[Arabidopsis thaliana] gi|332004907|gb|AED92290.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 535
Score = 70.1 bits (170), Expect = 1e-09
Identities = 36/82 (43%), Positives = 50/82 (60%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYNVL++G SK G KE V++ +EM+E P+K TF IL + L G E+ KI+
Sbjct: 436 FTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSM 495
Query: 186 IVSNRGVDQESWFVLVSKILGD 251
V N VD+ESW + + K G+
Sbjct: 496 AVMNGKVDKESWELFLKKFAGE 517
>gb|EMT05931.1| hypothetical protein F775_10608 [Aegilops tauschii]
Length = 487
Score = 69.7 bits (169), Expect = 1e-09
Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Frame = +3
Query: 9 TYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILESI 188
TY +KGF K GKP E +F EMV K P K +++L D LS + +DKI+E+
Sbjct: 390 TYEAFIKGFCKIGKPNEGATVFTEMVTKGCTPSKVLYQVLVDSLSEPIHDDIVDKIVETA 449
Query: 189 VSNRG--VDQESWFVLVSKILGDDENS-RDHINSVLET 293
+ G +D +SW + + ++L ++ H+NSVL+T
Sbjct: 450 ALSGGDFLDGDSWEIFIRRVLDTKSDTWNKHLNSVLDT 487
>ref|XP_006832985.1| hypothetical protein AMTR_s00221p00020810 [Amborella trichopoda]
gi|548837495|gb|ERM98263.1| hypothetical protein
AMTR_s00221p00020810 [Amborella trichopoda]
Length = 549
Score = 68.9 bits (167), Expect = 2e-09
Identities = 39/101 (38%), Positives = 64/101 (63%), Gaps = 2/101 (1%)
Frame = +3
Query: 3 VFTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILE 182
VFTYN+L+KGFS G+ +E +++ +EM+EKR +K+T+ IL D G T+++ K+L
Sbjct: 452 VFTYNILIKGFSIIGRGREGLRVLEEMLEKRCEANKSTYAILMD--GFHGSTDDIMKLLV 509
Query: 183 SIVSNRG--VDQESWFVLVSKILGDDENSRDHINSVLETRA 299
+ S RG +D +SW + V K++ D E + + +LE A
Sbjct: 510 ATTS-RGFLLDLDSWGLFVDKVICDREGWKCSLGRILECAA 549
>gb|ESW12302.1| hypothetical protein PHAVU_008G101200g [Phaseolus vulgaris]
Length = 534
Score = 67.8 bits (164), Expect = 5e-09
Identities = 36/95 (37%), Positives = 61/95 (64%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELS-SSGDTEELDKILE 182
FTYNVL+KGF K G KE +++ +EMVE +P+K+T+ IL D +S S G EE++K++
Sbjct: 437 FTYNVLIKGFCKVGDVKEGIRVLEEMVENGCLPNKSTYSILVDGISVSGGKKEEIEKVV- 495
Query: 183 SIVSNRGVDQESWFVLVSKILGDDENSRDHINSVL 287
+ GVD W + + K++G+ + + ++ +L
Sbjct: 496 LLAMTTGVDGGLWGIFL-KLVGNLDGNAAMLDRIL 529
>ref|XP_006287468.1| hypothetical protein CARUB_v10000680mg [Capsella rubella]
gi|482556174|gb|EOA20366.1| hypothetical protein
CARUB_v10000680mg [Capsella rubella]
Length = 533
Score = 67.8 bits (164), Expect = 5e-09
Identities = 33/82 (40%), Positives = 49/82 (59%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYNVL++G SK G KE V++ +EM+E P+K TF IL + + G E+ K++
Sbjct: 434 FTYNVLIEGLSKNGNVKEGVRVLEEMLENGCFPNKTTFLILFEGIQELGKEEDAIKVVSM 493
Query: 186 IVSNRGVDQESWFVLVSKILGD 251
V VD+ESW + + K G+
Sbjct: 494 AVMRGKVDKESWELFLKKFAGE 515
>ref|XP_004230006.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Solanum lycopersicum]
Length = 561
Score = 67.4 bits (163), Expect = 7e-09
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADELSSSGDTEELDKILES 185
FTYN+L+KGF K G KE +++ +EM++K P+K+T+ IL L S E+ ++L +
Sbjct: 464 FTYNMLIKGFCKVGNAKEGIRVLEEMLDKGCHPNKSTYSILIKGLLDSELNAEILRVL-A 522
Query: 186 IVSNRGVDQESWFVLVSKILGDDEN 260
+ ++ VD E+W VLV+K + D +N
Sbjct: 523 LAASGDVDPETWGVLVAKFVTDIQN 547
>ref|XP_004492340.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cicer arietinum]
Length = 545
Score = 67.0 bits (162), Expect = 9e-09
Identities = 33/95 (34%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = +3
Query: 6 FTYNVLMKGFSKAGKPKEVVKIFDEMVEKRVVPDKATFKILADE-LSSSGDTEELDKILE 182
FTYN+L+KGF K G KE +++ +EM++ +P+K+T+ IL D L S G +E++K++
Sbjct: 447 FTYNMLIKGFCKVGNVKEGIRVLEEMLQNGCLPNKSTYLILIDGLLLSGGMKQEINKVVS 506
Query: 183 SIVSNRGVDQESWFVLVSKILGDDENSRDHINSVL 287
+S GVD + W + V ++ + ++ I+ +L
Sbjct: 507 MAIST-GVDADMWNLFVKPVVDNVDSGAAEIDRIL 540