BLASTX nr result
ID: Zingiber24_contig00038723
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038723
(528 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 77 3e-12
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 75 7e-12
gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial ... 72 6e-11
ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Popu... 72 1e-10
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 71 2e-10
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 69 7e-10
ref|XP_002310027.1| hypothetical protein POPTRDRAFT_562706 [Popu... 66 4e-09
gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus no... 65 1e-08
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 62 8e-08
gb|EXB59778.1| NADP-dependent malic enzyme [Morus notabilis] 60 2e-07
ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polyme... 59 7e-07
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 55 8e-06
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 55 1e-05
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 76.6 bits (187), Expect = 3e-12
Identities = 52/147 (35%), Positives = 71/147 (48%)
Frame = +1
Query: 88 VWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRIRNFSGFILY 267
V LP SVE++L RIC EQ P+ +L ++S +IRN S I Y
Sbjct: 3 VSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKIRNLSALINY 62
Query: 268 MANNFRPIPTQESFADTLPSGSSSPLRSCGVCSEESLQSDPRYVAPSSSGQSISPQLIAL 447
M A + S SP + + L S P + Q+ SPQL+AL
Sbjct: 63 MVGK----------AAQGDAASHSP-------TPKHLISSPSSTPKKARRQASSPQLVAL 105
Query: 448 GQLEFRKAFLVLSYLGRYKLEETISVE 528
G+LEFRKAFL+LSY+G + E+ +S E
Sbjct: 106 GELEFRKAFLILSYIGELRPEDLLSAE 132
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 75.5 bits (184), Expect = 7e-12
Identities = 52/147 (35%), Positives = 71/147 (48%)
Frame = +1
Query: 88 VWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRIRNFSGFILY 267
V LP SVE++L RIC EQ P+ +L ++S +IRN S I Y
Sbjct: 3 VSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKIRNLSALINY 62
Query: 268 MANNFRPIPTQESFADTLPSGSSSPLRSCGVCSEESLQSDPRYVAPSSSGQSISPQLIAL 447
M A + S SP + + L S P + Q+ SPQL+AL
Sbjct: 63 MVGK----------AAQGDAASHSP-------TPKHLISSPSSTPKKARRQASSPQLVAL 105
Query: 448 GQLEFRKAFLVLSYLGRYKLEETISVE 528
G+LEFRKAFL+LSY+G + E+ +S E
Sbjct: 106 GELEFRKAFLILSYIGDKRPEDLLSAE 132
>gb|ESW24973.1| hypothetical protein PHAVU_004G1764001g, partial [Phaseolus
vulgaris]
Length = 689
Score = 72.4 bits (176), Expect = 6e-11
Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Frame = +1
Query: 79 DNAVWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRIR-NFSG 255
+N V LP +VE L++ IC +Q+ L PD +L ++ R IR + S
Sbjct: 9 NNHVLLPTAVEALINTICHDQNQLPPDFIIRQGLAAVGEQQALQILRTIAERPIRISLSA 68
Query: 256 FILYMANNFRPIPTQESFADTLPSGSSSPLRSCGVCSEESLQSDPRYVAPSSSGQSISPQ 435
FI YM N R + + + PS SS+P S P +P+ GQ+ S
Sbjct: 69 FIAYMLKNHRTVTS------STPSTSSTP-------------STPLTPSPTRPGQT-SSA 108
Query: 436 LIALGQLEFRKAFLVLSYLGRYKLEETISVE 528
L ALG++EFRKAFL LSY+GR LE S +
Sbjct: 109 LHALGEMEFRKAFLCLSYIGRESLENVASAD 139
>ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Populus trichocarpa]
Length = 305
Score = 71.6 bits (174), Expect = 1e-10
Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 26/176 (14%)
Frame = +1
Query: 79 DNAVWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRIR-NFSG 255
D V LP VEEL+ +IC EQ+ + +L ++SG+ IR +F G
Sbjct: 7 DKIVPLPCVVEELIAKICREQNRRPLETNTRLTLASLGEEVALNILWRISGQEIRKSFDG 66
Query: 256 FILYMANNFRPIPTQESFADTLPSGSS---------SPLRSCGVCSEESLQSDPRYVAPS 408
F+L++A F P S + + S S SP+ + + QSD +P
Sbjct: 67 FVLHLAKQFSPNINASSSSPNIHSSLSPSPQQPQNRSPITTTRLLMNS--QSDSGAQSPI 124
Query: 409 S----------------SGQSISPQLIALGQLEFRKAFLVLSYLGRYKLEETISVE 528
S + + S L+ALG+LEFRKAFL+LSYLG LEE +SV+
Sbjct: 125 SLKLEGSSTMDSQRQRGNESTTSQHLVALGELEFRKAFLILSYLGGKNLEEVVSVD 180
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 70.9 bits (172), Expect = 2e-10
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 22/169 (13%)
Frame = +1
Query: 88 VWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRIR-NFSGFIL 264
V LP SVE+L+ +I EQ+ L PD VL ++ +I+ +FSG+I
Sbjct: 13 VSLPLSVEQLISKIYTEQNKLPPDDGARRSLASLGEDAALDVLRTIASDKIKYSFSGYIN 72
Query: 265 YMA----NNFRPI---------PTQESFADT--------LPSGSSSPLRSCGVCSEESLQ 381
Y+ NN P+ P Q T LP G+ ++ V ++
Sbjct: 73 YLVKKRNNNGSPLKRVCFSPSSPQQNRSPVTVTTVRLLNLPQGTDYVVKQSPVADQQPRG 132
Query: 382 SDPRYVAPSSSGQSISPQLIALGQLEFRKAFLVLSYLGRYKLEETISVE 528
S ++ + ++ PQ +ALG+LEFRKAFL+LSY+G LEE I+ +
Sbjct: 133 SPMSSISHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVITAD 181
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 68.9 bits (167), Expect = 7e-10
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 21/168 (12%)
Frame = +1
Query: 88 VWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRIR-NFSGFIL 264
V LP SVE+L+ +I EQ+ L PD VL ++ +I+ +FSG+I
Sbjct: 13 VSLPLSVEQLISKIYTEQNKLPPDDGARRSLASLGEDAALDVLRTIASDKIKYSFSGYIN 72
Query: 265 YMA----NNFRPIPTQESFADTLPSGSSSPL----------------RSCGVCSEESLQS 384
Y+ NN P+ + F+ + P + SP+ + V ++ S
Sbjct: 73 YLVKKRNNNGSPLK-RVCFSPSSPQQNRSPVTVTTVRLLNLPQDYVVKQSPVADQQPRGS 131
Query: 385 DPRYVAPSSSGQSISPQLIALGQLEFRKAFLVLSYLGRYKLEETISVE 528
++ + ++ PQ +ALG+LEFRKAFL+LSY+G LEE I+ +
Sbjct: 132 PMSSISHAMRHRASIPQYVALGELEFRKAFLILSYIGENSLEEVITAD 179
>ref|XP_002310027.1| hypothetical protein POPTRDRAFT_562706 [Populus trichocarpa]
Length = 216
Score = 66.2 bits (160), Expect = 4e-09
Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 21/171 (12%)
Frame = +1
Query: 79 DNAVWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRIR-NFSG 255
D V LP +VEEL+ +IC E+ + +L ++SG IR +F G
Sbjct: 7 DKIVPLPCAVEELITKICREKDRRPLETNTRSTLASLGEEVALNILRRISGLEIRKSFDG 66
Query: 256 FILYMANNFRPIPTQESFADTLPSG-SSSPLRSCGVCSEESL---QSDPRYVAPS----- 408
F+L++A P S + + S S SP + + L QSD +P+
Sbjct: 67 FVLHLAKQCSPNINASSSSPHMHSSLSPSPQQPQNRTNTRLLMNSQSDSGAQSPTPLKLE 126
Query: 409 -----------SSGQSISPQLIALGQLEFRKAFLVLSYLGRYKLEETISVE 528
S + S L+ALG+LEFRKAFL+LSYLG LEE +S +
Sbjct: 127 GSSTMDSQRQRGSESTTSQHLVALGELEFRKAFLILSYLGGKNLEEVVSAD 177
>gb|EXB59781.1| putative RNA-dependent RNA polymerase 4 [Morus notabilis]
Length = 529
Score = 65.1 bits (157), Expect = 1e-08
Identities = 50/147 (34%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Frame = +1
Query: 94 LPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSG--RRIRNFSGFILY 267
LPRSV ELL RIC E+S PD VL ++ +I++ GF+ Y
Sbjct: 18 LPRSVLELLERICAERSQPPPDAELRRKLASAGEDEALRVLRTIADCKTKIKSLHGFVTY 77
Query: 268 MANNFRPIPTQESFADTLPSGSSSPLRSCGVCSEESLQSDPRYVAPSSSGQSISPQLIAL 447
+ P P+ S PS S P E S S +S G + Q+ AL
Sbjct: 78 LLRQQPPPPSLSS-----PSRSPVP--------ENSRPSSSPGTFANSQGAN-GAQMEAL 123
Query: 448 GQLEFRKAFLVLSYLGRYKLEETISVE 528
G+LEFRK FL+L+Y+GR +L+ + E
Sbjct: 124 GELEFRKQFLILNYIGRNELQSVTTAE 150
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 62.0 bits (149), Expect = 8e-08
Identities = 45/147 (30%), Positives = 72/147 (48%)
Frame = +1
Query: 88 VWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRIRNFSGFILY 267
V LP +VE L +IC QS+ +L +S ++IR+FS FI+Y
Sbjct: 22 VLLPHAVEAKLGQICRYQSVQPASMRAREMLASIGESSAMNLLNWISTQKIRDFSAFIIY 81
Query: 268 MANNFRPIPTQESFADTLPSGSSSPLRSCGVCSEESLQSDPRYVAPSSSGQSISPQLIAL 447
M N P S D + + + SL +D R ++ G + AL
Sbjct: 82 MVKNMNRPPDVLSSTDDVCECAPN-------LEPSSLMNDFRC---NTYGSNEFQFRKAL 131
Query: 448 GQLEFRKAFLVLSYLGRYKLEETISVE 528
G+LEFRKAFL+L+Y+G+ ++++ +S+E
Sbjct: 132 GELEFRKAFLILNYIGKQRIDDVLSIE 158
>gb|EXB59778.1| NADP-dependent malic enzyme [Morus notabilis]
Length = 1017
Score = 60.5 bits (145), Expect = 2e-07
Identities = 48/163 (29%), Positives = 85/163 (52%), Gaps = 12/163 (7%)
Frame = +1
Query: 76 LDNAVWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRI-RNFS 252
L V LPRSV+EL+ +IC +QS P+ +L ++ +I R+ S
Sbjct: 4 LREEVPLPRSVDELIDKICADQSQAHPEAKLRWRLAQRGEEGALEILRTIATTKIKRSLS 63
Query: 253 GFILYM---ANNFRPIPTQE---SFADTLPSGSSSPLRS--CGVCSEESLQSDPRYV--- 399
GFI+++ +++ R P + S + T SG S + + C + + ++ R +
Sbjct: 64 GFIIHLLERSSSPRSTPPKRLRLSDSPTSGSGVSDKVITVQCYAPPKGATEAVSRCLFLE 123
Query: 400 APSSSGQSISPQLIALGQLEFRKAFLVLSYLGRYKLEETISVE 528
AP+ G+++ + ALG+LEFRK FL+L+Y+G +L+ + E
Sbjct: 124 APTEGGEAV---MAALGELEFRKQFLILNYIGSNELQTVLRAE 163
>ref|XP_004513037.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cicer
arietinum]
Length = 997
Score = 58.9 bits (141), Expect = 7e-07
Identities = 55/163 (33%), Positives = 80/163 (49%), Gaps = 13/163 (7%)
Frame = +1
Query: 79 DNAVWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRI-RNFSG 255
D +V LP SVE L+++I +QS D +L +S + I R+ +
Sbjct: 3 DQSVNLPSSVENLINQIREQQSQPPLDSSIRRNLAELGEQKALQILYYISTQPIKRSLNA 62
Query: 256 FILYMANNFR--PIPTQESFADTLPSGSSSPLRSCGVCSE--ESLQSDPRYVA------P 405
F +YM N R P P++ S + + S S S R + S+ LQS P + P
Sbjct: 63 FTVYMINQHRSPPSPSRPSSSQS-QSQSQSQSRPYSLQSQLLSHLQSRPSPLPLRSQSLP 121
Query: 406 SSSGQSI--SPQLIALGQLEFRKAFLVLSYLGRYKLEETISVE 528
SSS S L ALG+LEFRK+FL++SY GR +E ++ E
Sbjct: 122 SSSTAPPPHSDVLTALGELEFRKSFLLMSYAGRENIENVVTAE 164
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine
max]
Length = 988
Score = 55.5 bits (132), Expect = 8e-06
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 1/156 (0%)
Frame = +1
Query: 58 MAHDNALDNAVWLPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRR 237
MA ++ + + LP SVE L+ IC +Q+ D +L +++ R
Sbjct: 1 MAENHNHRDLLILPPSVEALIESICRDQNRPPLDYSTRHRLKLQGEEQSLRILNKIAATR 60
Query: 238 IR-NFSGFILYMANNFRPIPTQESFADTLPSGSSSPLRSCGVCSEESLQSDPRYVAPSSS 414
IR +F+GF+ +M ++ + + + +++ S S S R P+ S
Sbjct: 61 IRLSFAGFVNHMLDDINHQNNNNNNNNNNNNNNNNNSHSQPEPSTRQQTSPTRPPRPTPS 120
Query: 415 GQSISPQLIALGQLEFRKAFLVLSYLGRYKLEETIS 522
L ALG+LEFRKAFL+LSY+GR LE I+
Sbjct: 121 SL-----LHALGELEFRKAFLILSYIGRESLENCIT 151
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 55.1 bits (131), Expect = 1e-05
Identities = 57/172 (33%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Frame = +1
Query: 94 LPRSVEELLHRICVEQSLLQPDPXXXXXXXXXXXXXXXXVLMQMSGRRIR-NFSGFILYM 270
LP SVE +L RIC EQ P +L +S R I+ + S F++YM
Sbjct: 16 LPYSVETMLDRICKEQGQKPPCTGIRRRLSSIGEKGSLEMLKIISRRPIKKSLSAFLVYM 75
Query: 271 ANNFRP-IPTQESFADTLPSGSSSPL--------RSCGVCSEESLQ-------SDPRYVA 402
+ + + + S + L SSSP R G S +S + P+ VA
Sbjct: 76 IDRYPDCLSSSSSPFNCLLKRSSSPRLFPSPEGKRLQGESSSKSKLEMGLLACASPQKVA 135
Query: 403 --------PSSSGQSISP----QLIALGQLEFRKAFLVLSYLGRYKLEETIS 522
P S+ + SP QL+ L +LEFRK FLVLSY+G KLE+ IS
Sbjct: 136 RQLSFCEEPESNCRRTSPYVSQQLMILNELEFRKLFLVLSYIGCNKLEDVIS 187