BLASTX nr result
ID: Zingiber24_contig00038683
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038683
(421 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004954990.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
gb|EMT11382.1| hypothetical protein F775_11112 [Aegilops tauschii] 117 2e-24
ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [S... 115 5e-24
dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare] 115 6e-24
gb|ACN28508.1| unknown [Zea mays] gi|413937254|gb|AFW71805.1| hy... 115 6e-24
ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea ma... 115 6e-24
gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japo... 113 3e-23
gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indi... 113 3e-23
ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group] g... 113 3e-23
ref|XP_006648732.1| PREDICTED: pentatricopeptide repeat-containi... 111 1e-22
gb|EOY03681.1| Pentatricopeptide repeat superfamily protein, put... 106 4e-21
ref|XP_004230029.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|XP_004305694.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|XP_006347656.1| PREDICTED: pentatricopeptide repeat-containi... 100 2e-19
gb|ESW09787.1| hypothetical protein PHAVU_009G155900g [Phaseolus... 99 8e-19
gb|ADE76509.1| unknown [Picea sitchensis] 97 2e-18
ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containi... 96 5e-18
ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containi... 95 8e-18
gb|EXB75175.1| hypothetical protein L484_025954 [Morus notabilis] 95 1e-17
ref|XP_006468372.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-17
>ref|XP_004954990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Setaria italica]
Length = 475
Score = 117 bits (294), Expect = 1e-24
Identities = 51/85 (60%), Positives = 67/85 (78%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E LF L+P N RY +LSN+YAAAG WDDARR++ LMKEKGL+KD YSW+E+R+ KH+F
Sbjct: 378 EFLFRLEPGNSGRYVMLSNIYAAAGQWDDARRVRGLMKEKGLRKDQAYSWIEVRSAKHVF 437
Query: 183 VARDTSHYETEDIYRLLATLVDHIK 257
VA D SH E ++IY +L L+DH++
Sbjct: 438 VAEDMSHREADEIYEMLGKLLDHMR 462
>gb|EMT11382.1| hypothetical protein F775_11112 [Aegilops tauschii]
Length = 415
Score = 117 bits (292), Expect = 2e-24
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
ESLF L+P N RY +LSN+YAAAG WDDARRI+ +MKEKGLKKD SW+E++N KHMF
Sbjct: 318 ESLFQLEPGNSGRYVMLSNIYAAAGQWDDARRIRGIMKEKGLKKDQACSWIEVQNAKHMF 377
Query: 183 VARDTSHYETEDIYRLLATLVDHIK 257
VA DTSH E +IY L L DH++
Sbjct: 378 VADDTSHCEANEIYGTLDKLFDHMR 402
>ref|XP_002452263.1| hypothetical protein SORBIDRAFT_04g022670 [Sorghum bicolor]
gi|241932094|gb|EES05239.1| hypothetical protein
SORBIDRAFT_04g022670 [Sorghum bicolor]
Length = 603
Score = 115 bits (289), Expect = 5e-24
Identities = 52/84 (61%), Positives = 66/84 (78%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E LF L+P N RY +LSN+YAAAG WDDARR++ LMKEKGLKKD YSW+E+R+ KH+F
Sbjct: 506 EFLFKLEPGNSGRYVMLSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSLKHVF 565
Query: 183 VARDTSHYETEDIYRLLATLVDHI 254
VA D SH E ++IY +L L+DH+
Sbjct: 566 VADDMSHCEADEIYEMLGKLLDHM 589
>dbj|BAK07383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 115 bits (288), Expect = 6e-24
Identities = 52/85 (61%), Positives = 66/85 (77%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
ESLF L+P N RY +LSN+YAAAG WDDARRI+ +MKEKGL+KD SW+E+R+ KHMF
Sbjct: 502 ESLFQLEPGNSGRYVMLSNIYAAAGQWDDARRIRAIMKEKGLRKDQACSWIEVRSAKHMF 561
Query: 183 VARDTSHYETEDIYRLLATLVDHIK 257
VA DTSH E +IY +L L D+++
Sbjct: 562 VADDTSHCEANEIYGMLDRLFDYMR 586
>gb|ACN28508.1| unknown [Zea mays] gi|413937254|gb|AFW71805.1| hypothetical protein
ZEAMMB73_337002 [Zea mays]
Length = 608
Score = 115 bits (288), Expect = 6e-24
Identities = 51/84 (60%), Positives = 65/84 (77%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E LF L+P N RY ++SN+YAAAG WDDARR++ LMKEKGLKKD YSW+E+R+ KH+F
Sbjct: 502 EFLFRLEPGNSGRYVMMSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSAKHVF 561
Query: 183 VARDTSHYETEDIYRLLATLVDHI 254
VA D SH E + IY +L L+DH+
Sbjct: 562 VADDISHCEADKIYEMLGKLLDHM 585
>ref|NP_001168520.1| uncharacterized protein LOC100382300 [Zea mays]
gi|195615774|gb|ACG29717.1| pentatricopeptide repeat
protein PPR868-14 [Zea mays] gi|223946951|gb|ACN27559.1|
unknown [Zea mays]
Length = 616
Score = 115 bits (288), Expect = 6e-24
Identities = 51/84 (60%), Positives = 65/84 (77%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E LF L+P N RY ++SN+YAAAG WDDARR++ LMKEKGLKKD YSW+E+R+ KH+F
Sbjct: 510 EFLFRLEPGNSGRYVMMSNIYAAAGQWDDARRVRGLMKEKGLKKDQAYSWIEVRSAKHVF 569
Query: 183 VARDTSHYETEDIYRLLATLVDHI 254
VA D SH E + IY +L L+DH+
Sbjct: 570 VADDISHCEADKIYEMLGKLLDHM 593
>gb|EAZ23434.1| hypothetical protein OsJ_07125 [Oryza sativa Japonica Group]
Length = 596
Score = 113 bits (282), Expect = 3e-23
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P+N RY +LSN+Y+AAG WDDAR+++ LMK KGL+KD YSW+E++ KHMF
Sbjct: 500 EALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMF 559
Query: 183 VARDTSHYETEDIYRLLATLVDHI 254
VA DTSH+E +IY +L L H+
Sbjct: 560 VADDTSHHEANEIYEMLDKLFHHM 583
>gb|EAY86272.1| hypothetical protein OsI_07642 [Oryza sativa Indica Group]
Length = 596
Score = 113 bits (282), Expect = 3e-23
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P+N RY +LSN+Y+AAG WDDAR+++ LMK KGL+KD YSW+E++ KHMF
Sbjct: 500 EALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMF 559
Query: 183 VARDTSHYETEDIYRLLATLVDHI 254
VA DTSH+E +IY +L L H+
Sbjct: 560 VADDTSHHEANEIYEMLDKLFHHM 583
>ref|NP_001047121.1| Os02g0555100 [Oryza sativa Japonica Group]
gi|113536652|dbj|BAF09035.1| Os02g0555100 [Oryza sativa
Japonica Group]
Length = 596
Score = 113 bits (282), Expect = 3e-23
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P+N RY +LSN+Y+AAG WDDAR+++ LMK KGL+KD YSW+E++ KHMF
Sbjct: 500 EALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMF 559
Query: 183 VARDTSHYETEDIYRLLATLVDHI 254
VA DTSH+E +IY +L L H+
Sbjct: 560 VADDTSHHEANEIYEMLDKLFHHM 583
>ref|XP_006648732.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Oryza brachyantha]
Length = 575
Score = 111 bits (277), Expect = 1e-22
Identities = 47/84 (55%), Positives = 64/84 (76%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P+N RY +LSN+Y+AAG WDDAR+++ LMK KGL+KD YSW+E++ KHMF
Sbjct: 475 EALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKGLRKDQAYSWIEVQRAKHMF 534
Query: 183 VARDTSHYETEDIYRLLATLVDHI 254
+A DTSH E +IY +L L H+
Sbjct: 535 IADDTSHCEANEIYEMLDKLFHHM 558
>gb|EOY03681.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao]
Length = 577
Score = 106 bits (264), Expect = 4e-21
Identities = 46/86 (53%), Positives = 66/86 (76%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P+N ARY +LSNVYAAA WDDA+ ++ L++E+GL K+ YSW+E+RN +H F
Sbjct: 470 EALFELEPRNAARYVMLSNVYAAARRWDDAKAVRRLLEERGLSKEAAYSWIEVRNVQHEF 529
Query: 183 VARDTSHYETEDIYRLLATLVDHIKD 260
VA+D H + E+I ++ LVDH+KD
Sbjct: 530 VAKDKGHSQIEEISEVIVKLVDHMKD 555
>ref|XP_004230029.1| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Solanum lycopersicum]
Length = 172
Score = 104 bits (259), Expect = 1e-20
Identities = 47/86 (54%), Positives = 63/86 (73%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P N ARY +LSN+YAAAG WDDAR ++ M +GL KD YSW+E++N +H F
Sbjct: 68 EALFELEPDNAARYIMLSNIYAAAGRWDDARSLRRYMDNRGLVKDAAYSWIEIKNIRHKF 127
Query: 183 VARDTSHYETEDIYRLLATLVDHIKD 260
VA+D SH +E+I LL L+D +KD
Sbjct: 128 VAKDQSHSRSEEIKELLTKLIDPMKD 153
>ref|XP_004305694.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g21090-like [Fragaria vesca subsp. vesca]
Length = 589
Score = 101 bits (251), Expect = 1e-19
Identities = 44/86 (51%), Positives = 64/86 (74%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P NGARY +LSN+YAAAG W DA R++ LM+++GL K+ YS +E+RN +H F
Sbjct: 486 EALFELEPNNGARYVMLSNIYAAAGRWADAHRVRRLMEDRGLTKESAYSLIEMRNARHEF 545
Query: 183 VARDTSHYETEDIYRLLATLVDHIKD 260
VA+D H +T ++ ++ L DH+KD
Sbjct: 546 VAKDKVHCQTGEMNDMIGKLADHMKD 571
>ref|XP_006347656.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like isoform X1 [Solanum tuberosum]
gi|565361832|ref|XP_006347657.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g13600-like isoform X2 [Solanum tuberosum]
Length = 574
Score = 100 bits (250), Expect = 2e-19
Identities = 45/86 (52%), Positives = 63/86 (73%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P N ARY +LSN+YAAAG WDDAR ++ M +GL K+ YSW+E++N +H F
Sbjct: 476 EALFELEPDNAARYIMLSNIYAAAGRWDDARSLRRYMDNRGLVKEAAYSWIEIKNIRHKF 535
Query: 183 VARDTSHYETEDIYRLLATLVDHIKD 260
V++D SH +E+I LL L+D +KD
Sbjct: 536 VSKDQSHSGSEEIKELLTKLIDPMKD 561
>gb|ESW09787.1| hypothetical protein PHAVU_009G155900g [Phaseolus vulgaris]
Length = 582
Score = 98.6 bits (244), Expect = 8e-19
Identities = 45/86 (52%), Positives = 63/86 (73%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P N ARY +L+N+YAA G W DA+RI+ +MKE+ LKK+P +SW+ELRN +H F
Sbjct: 474 EALFELEPNNTARYVMLANIYAACGRWGDAKRIRTVMKERCLKKEPAFSWIELRNLRHEF 533
Query: 183 VARDTSHYETEDIYRLLATLVDHIKD 260
VA+D H + +I + LV H+KD
Sbjct: 534 VAKDKLHPQIGEICEVNNKLVLHLKD 559
>gb|ADE76509.1| unknown [Picea sitchensis]
Length = 246
Score = 97.1 bits (240), Expect = 2e-18
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E LF L+P N A+Y LLSN+YAAAG WDD +++ +MK++G++K PG SW+E++N H F
Sbjct: 67 ECLFQLEPHNAAKYVLLSNIYAAAGRWDDVAKVRKIMKDRGVQKQPGCSWIEVKNKVHTF 126
Query: 183 VARDTSHYETEDIYRLLATL 242
+ D SH +TE+IY L L
Sbjct: 127 MVEDKSHPQTEEIYSTLEEL 146
>ref|XP_002273247.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 580
Score = 95.9 bits (237), Expect = 5e-18
Identities = 40/86 (46%), Positives = 62/86 (72%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E LF L+P N ARY ++ N+YAAA WD+AR+++ LM E+GL+K+ SW+E+RN +H F
Sbjct: 477 EVLFQLEPGNAARYVMVYNIYAAASRWDEARQVRRLMMERGLRKEAACSWIEVRNTRHQF 536
Query: 183 VARDTSHYETEDIYRLLATLVDHIKD 260
VA++ SH + ++Y ++ LVD + D
Sbjct: 537 VAKERSHCQINEVYEVIHNLVDQMYD 562
>ref|XP_004502948.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cicer arietinum]
Length = 599
Score = 95.1 bits (235), Expect = 8e-18
Identities = 44/86 (51%), Positives = 61/86 (70%)
Frame = +3
Query: 3 ESLFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMF 182
E+LF L+P+N RY +LSN+YAA G W DA RI+ +MKE+ LKK+ SW+EL+N +H F
Sbjct: 491 EALFELEPENTGRYVMLSNIYAACGRWCDANRIRNVMKERCLKKEQACSWIELKNERHEF 550
Query: 183 VARDTSHYETEDIYRLLATLVDHIKD 260
VA+D H E +IY + + LV H+ D
Sbjct: 551 VAKDKLHPEIGEIYEVNSKLVKHLMD 576
>gb|EXB75175.1| hypothetical protein L484_025954 [Morus notabilis]
Length = 850
Score = 94.7 bits (234), Expect = 1e-17
Identities = 44/85 (51%), Positives = 60/85 (70%)
Frame = +3
Query: 9 LFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMFVA 188
LF LDP+N Y LLSN++A AG W +I+ LMKE+G+KK PGYSW+E+ N HMFVA
Sbjct: 749 LFELDPQNSGYYILLSNIHANAGDWKSVLKIRSLMKERGVKKVPGYSWIEINNKTHMFVA 808
Query: 189 RDTSHYETEDIYRLLATLVDHIKDE 263
D SH E+ +IY +L +L+ ++ E
Sbjct: 809 ADGSHLESAEIYSVLMSLLLELRRE 833
>ref|XP_006468372.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Citrus sinensis]
Length = 847
Score = 94.4 bits (233), Expect = 1e-17
Identities = 45/88 (51%), Positives = 60/88 (68%)
Frame = +3
Query: 9 LFMLDPKNGARYTLLSNVYAAAGLWDDARRIKVLMKEKGLKKDPGYSWLELRNGKHMFVA 188
LF LDP+N Y LLSN++A AG W + +I+ LMKE+G++K PGYSW+EL N H+FVA
Sbjct: 746 LFDLDPQNSGYYVLLSNIHADAGQWGNVNKIRRLMKERGVQKIPGYSWIELNNITHLFVA 805
Query: 189 RDTSHYETEDIYRLLATLVDHIKDERVI 272
D SH E+ IY LL L+ ++ E I
Sbjct: 806 ADESHSESAQIYSLLNILLPELEKEGYI 833