BLASTX nr result
ID: Zingiber24_contig00038637
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038637
(366 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004954569.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuc... 165 5e-39
gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays] 164 1e-38
gb|AFW65850.1| WW domain-binding protein 11 [Zea mays] 164 1e-38
gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays] 164 1e-38
ref|XP_002453652.1| hypothetical protein SORBIDRAFT_04g009880 [S... 164 1e-38
ref|NP_001046503.1| Os02g0266100 [Oryza sativa Japonica Group] g... 163 3e-38
gb|EAY85293.1| hypothetical protein OsI_06664 [Oryza sativa Indi... 163 3e-38
gb|ACN25291.1| unknown [Zea mays] 162 3e-38
ref|NP_001131283.1| uncharacterized protein LOC100192596 [Zea ma... 162 3e-38
ref|XP_003572258.1| PREDICTED: uncharacterized protein LOC100822... 162 6e-38
dbj|BAK05707.1| predicted protein [Hordeum vulgare subsp. vulgare] 162 6e-38
ref|XP_002452566.1| hypothetical protein SORBIDRAFT_04g028260 [S... 162 6e-38
ref|XP_006648524.1| PREDICTED: U1 small nuclear ribonucleoprotei... 158 6e-37
emb|CBI32274.3| unnamed protein product [Vitis vinifera] 157 2e-36
ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263... 157 2e-36
ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putati... 155 5e-36
gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein is... 154 9e-36
gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein is... 154 9e-36
ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotei... 154 9e-36
ref|XP_006396542.1| hypothetical protein EUTSA_v10028986mg [Eutr... 154 2e-35
>ref|XP_004954569.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
C-1-like [Setaria italica]
Length = 265
Score = 165 bits (418), Expect = 5e-39
Identities = 76/85 (89%), Positives = 80/85 (94%)
Frame = +3
Query: 108 ASYRTMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIK 287
A+ MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIK
Sbjct: 34 AAAAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIK 93
Query: 288 EHLGQAAAFQVGATFNQHLMTMPGA 362
EHLGQAAAFQVGA FNQHL++ PGA
Sbjct: 94 EHLGQAAAFQVGAPFNQHLLSFPGA 118
>gb|AFW65851.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 322
Score = 164 bits (414), Expect = 1e-38
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +3
Query: 108 ASYRTMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIK 287
+S MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIK
Sbjct: 189 SSVAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIK 248
Query: 288 EHLGQAAAFQVGATFNQHLMTMPGA 362
EHLGQAAAFQ GA FNQHL+ PGA
Sbjct: 249 EHLGQAAAFQAGAPFNQHLLAFPGA 273
>gb|AFW65850.1| WW domain-binding protein 11 [Zea mays]
Length = 421
Score = 164 bits (414), Expect = 1e-38
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +3
Query: 108 ASYRTMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIK 287
+S MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIK
Sbjct: 189 SSVAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIK 248
Query: 288 EHLGQAAAFQVGATFNQHLMTMPGA 362
EHLGQAAAFQ GA FNQHL+ PGA
Sbjct: 249 EHLGQAAAFQAGAPFNQHLLAFPGA 273
>gb|AFW65849.1| hypothetical protein ZEAMMB73_580988 [Zea mays]
Length = 345
Score = 164 bits (414), Expect = 1e-38
Identities = 75/85 (88%), Positives = 78/85 (91%)
Frame = +3
Query: 108 ASYRTMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIK 287
+S MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIK
Sbjct: 189 SSVAAMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIK 248
Query: 288 EHLGQAAAFQVGATFNQHLMTMPGA 362
EHLGQAAAFQ GA FNQHL+ PGA
Sbjct: 249 EHLGQAAAFQAGAPFNQHLLAFPGA 273
>ref|XP_002453652.1| hypothetical protein SORBIDRAFT_04g009880 [Sorghum bicolor]
gi|363805507|sp|C5XZK6.1|RU1C1_SORBI RecName: Full=U1
small nuclear ribonucleoprotein C-1; Short=U1 snRNP C-1;
Short=U1-C-1; Short=U1C-1 gi|241933483|gb|EES06628.1|
hypothetical protein SORBIDRAFT_04g009880 [Sorghum
bicolor]
Length = 231
Score = 164 bits (414), Expect = 1e-38
Identities = 74/80 (92%), Positives = 77/80 (96%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAFQVGATFNQHLMTMPGA 362
AAAFQ GA FNQH++T PGA
Sbjct: 61 AAAFQAGAPFNQHMLTFPGA 80
>ref|NP_001046503.1| Os02g0266100 [Oryza sativa Japonica Group]
gi|50251962|dbj|BAD27897.1| putative u1 small nuclear
ribonucleoprotein C [Oryza sativa Japonica Group]
gi|113536034|dbj|BAF08417.1| Os02g0266100 [Oryza sativa
Japonica Group] gi|125581580|gb|EAZ22511.1| hypothetical
protein OsJ_06175 [Oryza sativa Japonica Group]
gi|215686377|dbj|BAG87638.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215707035|dbj|BAG93495.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 228
Score = 163 bits (412), Expect = 3e-38
Identities = 74/79 (93%), Positives = 77/79 (97%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAFQVGATFNQHLMTMPG 359
AAAFQVGA FNQHL++ PG
Sbjct: 61 AAAFQVGAPFNQHLLSFPG 79
>gb|EAY85293.1| hypothetical protein OsI_06664 [Oryza sativa Indica Group]
Length = 238
Score = 163 bits (412), Expect = 3e-38
Identities = 74/79 (93%), Positives = 77/79 (97%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAFQVGATFNQHLMTMPG 359
AAAFQVGA FNQHL++ PG
Sbjct: 61 AAAFQVGAPFNQHLLSFPG 79
>gb|ACN25291.1| unknown [Zea mays]
Length = 129
Score = 162 bits (411), Expect = 3e-38
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAFQVGATFNQHLMTMPGA 362
AAAFQ GA FNQHL+ PGA
Sbjct: 61 AAAFQAGAPFNQHLLAFPGA 80
>ref|NP_001131283.1| uncharacterized protein LOC100192596 [Zea mays]
gi|194691078|gb|ACF79623.1| unknown [Zea mays]
gi|195658989|gb|ACG48962.1| WW domain-binding protein 11
[Zea mays]
Length = 228
Score = 162 bits (411), Expect = 3e-38
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAFQVGATFNQHLMTMPGA 362
AAAFQ GA FNQHL+ PGA
Sbjct: 61 AAAFQAGAPFNQHLLAFPGA 80
>ref|XP_003572258.1| PREDICTED: uncharacterized protein LOC100822246 [Brachypodium
distachyon]
Length = 211
Score = 162 bits (409), Expect = 6e-38
Identities = 73/79 (92%), Positives = 76/79 (96%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSL+DQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLLDQRIKEHLGQ 60
Query: 303 AAAFQVGATFNQHLMTMPG 359
AAAFQVGA FNQH++ PG
Sbjct: 61 AAAFQVGAPFNQHMLQFPG 79
>dbj|BAK05707.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 162 bits (409), Expect = 6e-38
Identities = 74/79 (93%), Positives = 76/79 (96%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRNYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAFQVGATFNQHLMTMPG 359
AAAFQVGA FNQHL+ PG
Sbjct: 61 AAAFQVGAPFNQHLLQYPG 79
>ref|XP_002452566.1| hypothetical protein SORBIDRAFT_04g028260 [Sorghum bicolor]
gi|363805509|sp|C5XYW4.1|RU1C2_SORBI RecName: Full=U1
small nuclear ribonucleoprotein C-2; Short=U1 snRNP C-2;
Short=U1-C-2; Short=U1C-2 gi|241932397|gb|EES05542.1|
hypothetical protein SORBIDRAFT_04g028260 [Sorghum
bicolor]
Length = 228
Score = 162 bits (409), Expect = 6e-38
Identities = 73/80 (91%), Positives = 76/80 (95%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAFQVGATFNQHLMTMPGA 362
AAAFQ GA FNQH++ PGA
Sbjct: 61 AAAFQAGAPFNQHMLAFPGA 80
>ref|XP_006648524.1| PREDICTED: U1 small nuclear ribonucleoprotein C-1-like [Oryza
brachyantha]
Length = 226
Score = 158 bits (400), Expect = 6e-37
Identities = 72/77 (93%), Positives = 75/77 (97%)
Frame = +3
Query: 129 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQAA 308
RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQAA
Sbjct: 18 RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQAA 77
Query: 309 AFQVGATFNQHLMTMPG 359
AFQVGA FNQHL++ PG
Sbjct: 78 AFQVGAPFNQHLLSFPG 94
>emb|CBI32274.3| unnamed protein product [Vitis vinifera]
Length = 190
Score = 157 bits (396), Expect = 2e-36
Identities = 73/80 (91%), Positives = 76/80 (95%), Gaps = 1/80 (1%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAF-QVGATFNQHLMTMPG 359
AAF QVGA +NQHL++ PG
Sbjct: 61 TAAFQQVGAAYNQHLVSFPG 80
>ref|XP_002270246.1| PREDICTED: uncharacterized protein LOC100263028 [Vitis vinifera]
gi|363805533|sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1
small nuclear ribonucleoprotein C; Short=U1 snRNP C;
Short=U1-C; Short=U1C
Length = 213
Score = 157 bits (396), Expect = 2e-36
Identities = 73/80 (91%), Positives = 76/80 (95%), Gaps = 1/80 (1%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAF-QVGATFNQHLMTMPG 359
AAF QVGA +NQHL++ PG
Sbjct: 61 TAAFQQVGAAYNQHLVSFPG 80
>ref|XP_002520698.1| U1 small nuclear ribonucleoprotein C, putative [Ricinus communis]
gi|223540083|gb|EEF41660.1| U1 small nuclear
ribonucleoprotein C, putative [Ricinus communis]
Length = 206
Score = 155 bits (392), Expect = 5e-36
Identities = 73/79 (92%), Positives = 75/79 (94%), Gaps = 1/79 (1%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAF-QVGATFNQHLMTMP 356
AAAF QVGA +NQHL+ P
Sbjct: 61 AAAFQQVGAAYNQHLLQRP 79
>gb|EOY19063.1| C2H2 and C2HC zinc fingers superfamily protein isoform 2 [Theobroma
cacao]
Length = 195
Score = 154 bits (390), Expect = 9e-36
Identities = 73/76 (96%), Positives = 74/76 (97%), Gaps = 1/76 (1%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAF-QVGATFNQHLM 347
AAAF QVGA FNQHLM
Sbjct: 61 AAAFQQVGAAFNQHLM 76
>gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma
cacao]
Length = 208
Score = 154 bits (390), Expect = 9e-36
Identities = 73/76 (96%), Positives = 74/76 (97%), Gaps = 1/76 (1%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAF-QVGATFNQHLM 347
AAAF QVGA FNQHLM
Sbjct: 61 AAAFQQVGAAFNQHLM 76
>ref|XP_004148886.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Cucumis
sativus] gi|449491514|ref|XP_004158922.1| PREDICTED: U1
small nuclear ribonucleoprotein C-like [Cucumis sativus]
Length = 197
Score = 154 bits (390), Expect = 9e-36
Identities = 73/76 (96%), Positives = 74/76 (97%), Gaps = 1/76 (1%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAF-QVGATFNQHLM 347
AAAF QVGA FNQHL+
Sbjct: 61 AAAFQQVGAAFNQHLL 76
>ref|XP_006396542.1| hypothetical protein EUTSA_v10028986mg [Eutrema salsugineum]
gi|557097559|gb|ESQ37995.1| hypothetical protein
EUTSA_v10028986mg [Eutrema salsugineum]
Length = 193
Score = 154 bits (388), Expect = 2e-35
Identities = 72/79 (91%), Positives = 74/79 (93%), Gaps = 1/79 (1%)
Frame = +3
Query: 123 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 302
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 303 AAAF-QVGATFNQHLMTMP 356
AAAF QVGA FNQH++ P
Sbjct: 61 AAAFQQVGAVFNQHMLARP 79