BLASTX nr result
ID: Zingiber24_contig00038575
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038575
(311 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX93509.1| Tetratricopeptide repeat-like superfamily protein... 75 9e-12
gb|EXB70651.1| hypothetical protein L484_023837 [Morus notabilis] 72 8e-11
ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat... 69 6e-10
ref|XP_006447804.1| hypothetical protein CICLE_v10017893mg [Citr... 68 1e-09
ref|XP_003609218.1| Pentatricopeptide repeat-containing protein ... 65 9e-09
ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat... 63 5e-08
ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat... 62 8e-08
emb|CBI28441.3| unnamed protein product [Vitis vinifera] 62 8e-08
emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera] 62 8e-08
ref|XP_006357638.1| PREDICTED: putative pentatricopeptide repeat... 60 2e-07
ref|XP_004243876.1| PREDICTED: putative pentatricopeptide repeat... 60 2e-07
ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat... 60 4e-07
ref|XP_004305676.1| PREDICTED: putative pentatricopeptide repeat... 59 9e-07
gb|EMJ11374.1| hypothetical protein PRUPE_ppa018038mg, partial [... 58 1e-06
tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea m... 56 4e-06
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,... 56 4e-06
gb|ESW29234.1| hypothetical protein PHAVU_002G054500g [Phaseolus... 56 6e-06
ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
>gb|EOX93509.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
Length = 1161
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/77 (46%), Positives = 50/77 (64%)
Frame = +1
Query: 79 ASSGASIQPAASEHDSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLY 258
+ S S P ++ + Y+ LV RY S L DAK HL+ K GF D+FLSN+++N+Y
Sbjct: 68 SQSQPSSLPFSASNFELYESLVTRYRGSLSLTDAKEFHLQVFKHGFDGDLFLSNSLINVY 127
Query: 259 AKAGDLATAAELFDEMP 309
+AGDL +A +LFDEMP
Sbjct: 128 VRAGDLTSARKLFDEMP 144
>gb|EXB70651.1| hypothetical protein L484_023837 [Morus notabilis]
Length = 1398
Score = 72.0 bits (175), Expect = 8e-11
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = +1
Query: 103 PAASEHDSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAGDLAT 282
P +SE Y+ LV +Y S L DAK HL+ +K+GFTSDV+L N ++N+Y + G+LA+
Sbjct: 74 PPSSE---VYEFLVSQYQNSCSLDDAKKFHLQILKNGFTSDVYLYNTLINVYVRIGNLAS 130
Query: 283 AAELFDEMP 309
A++LFDEMP
Sbjct: 131 ASKLFDEMP 139
>ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = +1
Query: 115 EHDSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAGDLATAAEL 294
+HD + L +RY S DA+ LHL+ K+GF +D+FL N ++N+YA+ GDL + ++
Sbjct: 71 QHDEKIESLAQRYRYSCGSKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKV 130
Query: 295 FDEMP 309
FDEMP
Sbjct: 131 FDEMP 135
>ref|XP_006447804.1| hypothetical protein CICLE_v10017893mg [Citrus clementina]
gi|568830346|ref|XP_006469462.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At5g09950-like [Citrus sinensis]
gi|557550415|gb|ESR61044.1| hypothetical protein
CICLE_v10017893mg [Citrus clementina]
Length = 1057
Score = 67.8 bits (164), Expect = 1e-09
Identities = 31/60 (51%), Positives = 42/60 (70%)
Frame = +1
Query: 130 YQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAGDLATAAELFDEMP 309
Y+ LV +Y S DAK HL+ +K GF DVFL N ++N+Y + GDLA+A++LFDEMP
Sbjct: 67 YEHLVGKYRDSCSSKDAKLFHLQILKHGFAYDVFLCNTLINVYVRVGDLASASKLFDEMP 126
>ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 65.1 bits (157), Expect = 9e-09
Identities = 34/75 (45%), Positives = 45/75 (60%)
Frame = +1
Query: 85 SGASIQPAASEHDSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAK 264
S + +Q SE D RY SS L DA LHL+ K+GFT DVF N ++N+Y +
Sbjct: 136 SHSQLQQLDSEFD--------RYKTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVR 187
Query: 265 AGDLATAAELFDEMP 309
G+L +A +LFDEMP
Sbjct: 188 IGNLVSARKLFDEMP 202
>ref|XP_004491623.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cicer arietinum]
Length = 1030
Score = 62.8 bits (151), Expect = 5e-08
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +1
Query: 85 SGASIQPAASEHDSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAK 264
S + QP+ +H RY S DA LHL+ K+GFT+DVF+ N ++N+Y +
Sbjct: 32 SHSQFQPSDFDH--------HRYKTSCSFYDANQLHLQIYKNGFTNDVFMCNTLINIYVR 83
Query: 265 AGDLATAAELFDEMP 309
G+L +A LFDEMP
Sbjct: 84 IGNLVSAHNLFDEMP 98
>ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 130 YQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAGDLATAAELFDEM 306
++ L+ RY S +A+ LHL+ IK GF ++FLSN ++N+Y + GDL +A +LFDEM
Sbjct: 74 FESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132
>emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 130 YQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAGDLATAAELFDEM 306
++ L+ RY S +A+ LHL+ IK GF ++FLSN ++N+Y + GDL +A +LFDEM
Sbjct: 102 FESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 160
>emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 62.0 bits (149), Expect = 8e-08
Identities = 27/59 (45%), Positives = 41/59 (69%)
Frame = +1
Query: 130 YQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAGDLATAAELFDEM 306
++ L+ RY S +A+ LHL+ IK GF ++FLSN ++N+Y + GDL +A +LFDEM
Sbjct: 547 FESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605
>ref|XP_006357638.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Solanum tuberosum]
Length = 1086
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Frame = +1
Query: 88 GASIQPAASEHD-----SAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVN 252
GA++ P S + + LV++YL S DA+ LHL+ IK G D++L N ++N
Sbjct: 77 GAAVLPEKSVYSVPIVSDKCEFLVQKYLLSFSENDAQRLHLDIIKYGVVKDLYLCNTLIN 136
Query: 253 LYAKAGDLATAAELFDEMP 309
LY K DL +A ++FDEMP
Sbjct: 137 LYVKNADLISAHDVFDEMP 155
>ref|XP_004243876.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Solanum lycopersicum]
Length = 1086
Score = 60.5 bits (145), Expect = 2e-07
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = +1
Query: 61 GSLAFPASSGASIQPAASEHDSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSN 240
G++ P S S+ + + + LV++YL S DA+ LHL+ IK G D++L N
Sbjct: 77 GAVVLPEKSVCSVSIVSDKCEF----LVQKYLLSFSENDAQRLHLDIIKYGVVKDLYLCN 132
Query: 241 NVVNLYAKAGDLATAAELFDEMP 309
++NLY K DL +A +FDEMP
Sbjct: 133 TLINLYVKNADLISAHHVFDEMP 155
>ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +1
Query: 148 RYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAGDLATAAELFDEMP 309
RY S + DA LHL+ K+G TSDVF N +VN++ +AG+L +A +LFDEMP
Sbjct: 48 RYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMP 101
>ref|XP_004305676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Fragaria vesca subsp. vesca]
Length = 1043
Score = 58.5 bits (140), Expect = 9e-07
Identities = 27/60 (45%), Positives = 39/60 (65%)
Frame = +1
Query: 130 YQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAGDLATAAELFDEMP 309
Y L+ ++ S +A++ H + +K GFT D+FLSN ++NLY K G L+ A LFDEMP
Sbjct: 53 YANLLHQFKNSLTQNEAETFHSKILKHGFTQDLFLSNALLNLYVKIGSLSNARHLFDEMP 112
>gb|EMJ11374.1| hypothetical protein PRUPE_ppa018038mg, partial [Prunus persica]
Length = 577
Score = 57.8 bits (138), Expect = 1e-06
Identities = 30/77 (38%), Positives = 43/77 (55%)
Frame = +1
Query: 79 ASSGASIQPAASEHDSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLY 258
AS I P E Y QL+R +S+L K++H + +K FL N+++N+Y
Sbjct: 20 ASKSTHILPTEEE---TYSQLLRTCGQTSNLPHGKAIHAKLVKGSLPFSPFLQNHLLNMY 76
Query: 259 AKAGDLATAAELFDEMP 309
AK GDL+ +LFDEMP
Sbjct: 77 AKCGDLSNGLQLFDEMP 93
>tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/93 (37%), Positives = 47/93 (50%)
Frame = +1
Query: 31 DLFAQRRGPRGSLAFPASSGASIQPAASEHDSAYQQLVRRYLASSDLGDAKSLHLEWIKS 210
DL A R GP S + P + L+RR D ++LH+E IK
Sbjct: 43 DLLAHRLGPPRS---------PLSPPPPRPHADLLPLLRR---GGDANSPENLHVELIKR 90
Query: 211 GFTSDVFLSNNVVNLYAKAGDLATAAELFDEMP 309
G D+FL N++VN YAK LA A+++FDEMP
Sbjct: 91 GLNHDLFLCNHLVNSYAKGARLAAASQVFDEMP 123
>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1439
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/81 (37%), Positives = 50/81 (61%)
Frame = +1
Query: 67 LAFPASSGASIQPAASEHDSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNV 246
L+FP + P++S+ S L+R +++S+L K +H I SG TSD FL+NN+
Sbjct: 690 LSFPFRFSSLSSPSSSQCFS----LLRAAVSTSNLHLGKCIHANIITSGLTSDRFLANNL 745
Query: 247 VNLYAKAGDLATAAELFDEMP 309
+ +Y+K G +++A +LFD P
Sbjct: 746 ITMYSKCGSVSSARQLFDRTP 766
>gb|ESW29234.1| hypothetical protein PHAVU_002G054500g [Phaseolus vulgaris]
Length = 582
Score = 55.8 bits (133), Expect = 6e-06
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 121 DSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAGDLATAAELFD 300
+ Y L+RRY S+L +++H + I S +FL N+++N+Y K GDL++ ++FD
Sbjct: 28 EEMYSNLLRRYAQDSNLLCGRAIHAKSITGSIPSTLFLQNHLLNMYVKIGDLSSGLKMFD 87
Query: 301 EMP 309
EMP
Sbjct: 88 EMP 90
>ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 55.8 bits (133), Expect = 6e-06
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +1
Query: 91 ASIQPAASEHDSAYQQLVRRYLASSDLGDAKSLHLEWIKSGFTSDVFLSNNVVNLYAKAG 270
A ++ S + Y L+ R + + LG AK+LH +K+G D+F++ ++VN+Y + G
Sbjct: 68 AMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCG 127
Query: 271 DLATAAELFDEMP 309
+ A LFDEMP
Sbjct: 128 NSQDARNLFDEMP 140