BLASTX nr result
ID: Zingiber24_contig00038518
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038518
(1549 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003572211.1| PREDICTED: DNA repair protein complementing ... 302 3e-79
gb|EMT23362.1| DNA repair complementing XP-C cells-like protein ... 287 1e-74
ref|NP_001061843.1| Os08g0427500 [Oryza sativa Japonica Group] g... 281 5e-73
ref|XP_006660145.1| PREDICTED: DNA repair protein complementing ... 275 4e-71
ref|XP_004973475.1| PREDICTED: DNA repair protein complementing ... 273 1e-70
ref|XP_002444371.1| hypothetical protein SORBIDRAFT_07g020840 [S... 267 1e-68
ref|XP_004289443.1| PREDICTED: DNA repair protein complementing ... 266 2e-68
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ... 265 3e-68
gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus... 265 4e-68
gb|EMS61539.1| DNA repair protein complementing XP-C cells-like ... 263 2e-67
ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citr... 261 4e-67
ref|XP_006826912.1| hypothetical protein AMTR_s00010p00163020 [A... 260 1e-66
ref|XP_006482096.1| PREDICTED: DNA repair protein complementing ... 258 4e-66
ref|XP_006482097.1| PREDICTED: DNA repair protein complementing ... 256 2e-65
ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Popu... 250 1e-63
gb|EMJ18890.1| hypothetical protein PRUPE_ppa001034mg [Prunus pe... 244 6e-62
ref|XP_004250530.1| PREDICTED: DNA repair protein complementing ... 244 6e-62
ref|XP_006364631.1| PREDICTED: DNA repair protein complementing ... 244 7e-62
gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform ... 242 4e-61
gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform ... 241 6e-61
>ref|XP_003572211.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Brachypodium distachyon]
Length = 889
Score = 302 bits (773), Expect = 3e-79
Identities = 201/505 (39%), Positives = 278/505 (55%), Gaps = 41/505 (8%)
Frame = +1
Query: 157 MRTRNQS-KSAEPPPA--PVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALVGG 327
MRTR Q+ + A+PPPA P G S RR+ S SA K + +K + A+V
Sbjct: 1 MRTRGQTHREAKPPPASSPASLGGGEVAASGANRRKASSSAKGK-SPAAKGKSPAAMV-- 57
Query: 328 KQPHETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKGCDTRNDKASTSIASENVGD 507
E +S + +K KV+ N E + +A E K + + +A +GD
Sbjct: 58 ----ELESSSGLKHKKGKVNTKWNDESGMKRCSAGSSEKKFLEKKEPEA--------IGD 105
Query: 508 -DANELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKELAELV 684
DA + WEEG V V E + GYS+D G +T+EFTD PSS+ K+ RR +A++KELAEL+
Sbjct: 106 SDAAGMDWEEGHVSVVEREQGYSHDLGETVTVEFTDVPSSTEKRTVRRHTAEEKELAELM 165
Query: 685 HKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVG-EIQKLTANGLCYLVNWFRD 861
HKVHLLCLLARGR++D CNDPLIQA G +I KL AN L LV+WF
Sbjct: 166 HKVHLLCLLARGRVIDKACNDPLIQASILSVLPNHLLLNGVDIAKLDANNLRSLVSWFHH 225
Query: 862 NFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKP 1041
F V + +T+R SF+ N+AFALQ+H GTAEEV ALSVALFRAL+LT RFV+ +DV LKP
Sbjct: 226 TFSVIAQSTERRSFESNMAFALQSHVGTAEEVCALSVALFRALNLTARFVTNMDVVGLKP 285
Query: 1042 DTDMIGITKQDTGSLDIKISSPSTSVLVPHQIDVPSDVKSLDKTNDHIDLA--------- 1194
D +G QD L + + PS+SV + + S +S D T I +A
Sbjct: 286 DAKGMGTPNQDGPRLSTR-ALPSSSVAGHEEFNTLSPARSQDNTKRGISMAKQQCNLGNL 344
Query: 1195 ----STSRACNDQLNSC-----------------------ATNLAQVSKRKGDMEFVLEL 1293
+ R+ + L++C + A++ KR+GD+EF L+L
Sbjct: 345 KRTSACRRSLSKNLSNCNAADGSSFASTSNGESSRSPCPLTPSTAEMKKRRGDVEFELQL 404
Query: 1294 ERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSRR 1473
E A+SATAA ++K+ + S + + T +K LR+N V+ A+WS R
Sbjct: 405 EMALSATAADSKENKLATTSSQSTGSLLYSTPPLKKLRKNAEVE------SNSSAVWS-R 457
Query: 1474 TGPPLYWAKVYCNGESSTGRGVHVD 1548
+ PLYWA+VYC G++STGR +HVD
Sbjct: 458 SRAPLYWAEVYCGGQTSTGRWLHVD 482
>gb|EMT23362.1| DNA repair complementing XP-C cells-like protein [Aegilops tauschii]
Length = 959
Score = 287 bits (734), Expect = 1e-74
Identities = 200/506 (39%), Positives = 273/506 (53%), Gaps = 42/506 (8%)
Frame = +1
Query: 157 MRTRNQSKSAEPPPAPVDSEAGTSTGSKPK--------RRRVSGSADSKITKRSKKATSD 312
MRTR Q++ EP P P S A + G + RRR S +A K + A
Sbjct: 1 MRTRGQTRG-EPKPPPASSPASSGRGGAEEVAAGGANNRRRASPAAKGK--SPATNARLQ 57
Query: 313 ALVGGKQPHETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKGCDTRNDKASTSIAS 492
V G+ E +S + +K KV+ +N + + + E K + + +A
Sbjct: 58 MPVAGQV--ELESSLGIKRKKGKVNTERNDDTGKKRCSVGSSEKKKLEEKEPEA------ 109
Query: 493 ENVGD-DANELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKE 669
+GD DA + WE+G V E K GYS+D G +T+EFTD PSS+ KK RR +A++KE
Sbjct: 110 --IGDNDAAGMEWEDGHVSPVECKEGYSHDLGETVTVEFTDVPSSTEKKSVRRHTAEEKE 167
Query: 670 LAELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVG-EIQKLTANGLCYLV 846
LAEL+HKVHLLCLLARGR++D CNDPLIQA G + KL AN L LV
Sbjct: 168 LAELMHKVHLLCLLARGRVIDKACNDPLIQASVLSVLPQHLLWNGVDTLKLDANKLRSLV 227
Query: 847 NWFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDV 1026
NWF F + + + D+GSF+ N+AFALQ+HEGTAEEV ALSVALFRAL+LT RFV+ +DV
Sbjct: 228 NWFHRTFCIIARSADKGSFESNMAFALQSHEGTAEEVCALSVALFRALNLTARFVTNMDV 287
Query: 1027 ASLKPDTDMIGITKQDTGSLDIKI--SSP------STSVLVPHQIDV------------- 1143
LKPD +G QD L + SP + L P +++V
Sbjct: 288 VGLKPDAKAMGTPNQDGTRLSTRALPCSPVAAGHNEFNTLSPARLEVNTEHRFSRAKQRG 347
Query: 1144 -------PSDVKSLDKTNDHI---DLASTSR-ACNDQLNSCATNLAQVSKRKGDMEFVLE 1290
S KSL K + ASTS+ + NS ++ A++ KRKGD+EF L+
Sbjct: 348 DLGNLKRTSACKSLSKNLSNCKADQYASTSKDESSSSPNSFTSSNAEIPKRKGDVEFELQ 407
Query: 1291 LERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSR 1470
L+ A+SAT A + + + S + ++ T +K LR+N V A+WS
Sbjct: 408 LQMALSATGAEIQEMLAATSSQSIG--TLLDYTPLKKLRKNAEV------ASNSSAVWS- 458
Query: 1471 RTGPPLYWAKVYCNGESSTGRGVHVD 1548
R+GPPLYWA+VYC G++ TG+ VHVD
Sbjct: 459 RSGPPLYWAEVYCGGQTLTGKWVHVD 484
>ref|NP_001061843.1| Os08g0427500 [Oryza sativa Japonica Group]
gi|38175490|dbj|BAD01186.1| putative xeroderma
pigmentosum group C protein [Oryza sativa Japonica Group]
gi|38175770|dbj|BAD01464.1| putative xeroderma
pigmentosum group C protein [Oryza sativa Japonica Group]
gi|113623812|dbj|BAF23757.1| Os08g0427500 [Oryza sativa
Japonica Group]
Length = 880
Score = 281 bits (719), Expect = 5e-73
Identities = 193/497 (38%), Positives = 263/497 (52%), Gaps = 33/497 (6%)
Frame = +1
Query: 157 MRTRNQSKSAEPPPAPVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALVGGKQP 336
MRTR+Q A +G S GS R G T R ++ S A GK P
Sbjct: 1 MRTRSQRDGHHAAAAAETPPSGASGGSGGDVARGGG------TPRRRRRASPAAEKGKSP 54
Query: 337 HETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKGCDTRNDKASTSIASENVGDDAN 516
KV++ + K+ K +A + G S + E DA
Sbjct: 55 -----------AKVEMESALEDKSKNVKVHAEGYDDAGMTRFGRDGSEKNSLEEEDPDAA 103
Query: 517 ELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKELAELVHKVH 696
++ WEEG V +E+ YS++ G +T+EFTD PSS+ KK RR +A++KELAELVH+VH
Sbjct: 104 DMDWEEGIVFAAEHDECYSHELGETVTVEFTDLPSSTEKKTARRLTAEEKELAELVHRVH 163
Query: 697 LLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVG-EIQKLTANGLCYLVNWFRDNFQV 873
LLCLLARGR++D CNDPLIQA + L AN L LV+WF + F V
Sbjct: 164 LLCLLARGRVIDKACNDPLIQASILSVLPQHVLRNSVDTPILKANELRSLVSWFHNTFSV 223
Query: 874 RSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKPDTDM 1053
+ + D+GSFK NLAFALQ++ GTAEEV ALSVALFRAL+LT RFV+ LDVA LKPDT
Sbjct: 224 IAQSDDKGSFKSNLAFALQSYVGTAEEVCALSVALFRALNLTARFVANLDVAGLKPDTKS 283
Query: 1054 IGITKQDTGSLDIKISSPSTSVL------------------------VPHQIDVPSDVKS 1161
+G + QD L K + PS+S + P Q+ V KS
Sbjct: 284 MGTSNQDEPRLCTK-ALPSSSFVAGHNEYNNLSPVLSQNNTEGSINTTPKQVKVQGCRKS 342
Query: 1162 LD------KTNDHIDLASTSR--ACNDQLNSCATNLAQVSKRKGDMEFVLELERAISATA 1317
L K N AS S+ + + Q S ++N A+V +RKGD+EF L+LE A+ A+A
Sbjct: 343 LSKKLSKCKANQRDSSASLSKDSSSSSQYPSTSSN-AEVPRRKGDLEFELQLEMALLASA 401
Query: 1318 AAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSRRTGPPLYWA 1497
A D+K+ ++ ++ D ++ T +K LR++ +WSR PL+WA
Sbjct: 402 AKSQDNKLATQLNQSTDSLLSSTPPLKKLRKSEEAS------SNSSVVWSRNRA-PLFWA 454
Query: 1498 KVYCNGESSTGRGVHVD 1548
+V+C GE+S+GR VHVD
Sbjct: 455 EVFCGGEASSGRWVHVD 471
>ref|XP_006660145.1| PREDICTED: DNA repair protein complementing XP-C cells homolog [Oryza
brachyantha]
Length = 875
Score = 275 bits (703), Expect = 4e-71
Identities = 191/505 (37%), Positives = 258/505 (51%), Gaps = 41/505 (8%)
Frame = +1
Query: 157 MRTRNQSK-----SAEPPPAPVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALV 321
MRTR + +AE PP S G + +RRR S SA V
Sbjct: 1 MRTRRSQRGRDADAAETPPPGARSGGGDAASGGTRRRRASSSA----------------V 44
Query: 322 GGKQPHETGTSDAEREEKVKVSVGKNSEGKDAK---ENANEIELKGCDTRNDKASTSIAS 492
GK P KV++ +GK+ K E ++ + C + +
Sbjct: 45 KGKSP-----------AKVEMESALGDKGKNVKVHTEGDDDAGMTRCSSEKNSLDKEDPE 93
Query: 493 ENVGDDANELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKEL 672
G DA ++ WEEG + E+K SY+ G T+EFTD PSS+ KK RR +A++KEL
Sbjct: 94 AIRGCDAADMDWEEGHILAEEHKE--SYELGETFTVEFTDVPSSTEKKTVRRLTAEEKEL 151
Query: 673 AELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVG-EIQKLTANGLCYLVN 849
AELVH+VHLLCLLARGR++D CNDPLIQA E L AN L LV+
Sbjct: 152 AELVHRVHLLCLLARGRVIDKACNDPLIQASILSVLPQHVLWNSVETPILKANELRSLVS 211
Query: 850 WFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVA 1029
WF F V H+ DRGSF+ NLAFALQ H GTAEEV ALSVALFRAL+LT RFV+ +DVA
Sbjct: 212 WFHRTFCVTPHSDDRGSFESNLAFALQNHVGTAEEVCALSVALFRALNLTARFVTNMDVA 271
Query: 1030 SLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPHQID---VPSDVKSLDKTNDHID---- 1188
LKPDT + + QD L K + PS+S + H P +S D T D ID
Sbjct: 272 GLKPDTKSMETSNQDAPRLCTK-ALPSSSFVAGHNEHNNLSPVVSQSQDNTEDSIDTTPK 330
Query: 1189 ---LASTSRACNDQLNSC----------------------ATNLAQVSKRKGDMEFVLEL 1293
+ ++ + +L+ C +T+ A+V KRKGD EF L+L
Sbjct: 331 KHKVQGCKKSLSKKLSKCKADHGISCASQSKDSSSSSQYPSTSNAEVPKRKGDWEFELQL 390
Query: 1294 ERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSRR 1473
E A+ A+AA V D+++ + + D + T K L ++ +WS R
Sbjct: 391 EMALLASAAEVQDNELATHLNLSTDSILNSTPPFKKLNKS------AEAPCNSSTVWS-R 443
Query: 1474 TGPPLYWAKVYCNGESSTGRGVHVD 1548
+G PL+WA+V+C G++S+G+ VHVD
Sbjct: 444 SGAPLFWAEVFCGGQASSGKWVHVD 468
>ref|XP_004973475.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Setaria italica]
Length = 863
Score = 273 bits (699), Expect = 1e-70
Identities = 200/495 (40%), Positives = 255/495 (51%), Gaps = 32/495 (6%)
Frame = +1
Query: 160 RTRNQSKSAEPPPAPVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALVGGKQPH 339
RTR+QS S P P + + RRR S +A K +K T L ++
Sbjct: 3 RTRSQSASEAKPALPSAGPGTEAATAGAGRRRASPAAKGK--SPAKVETGSPLGNTRKKG 60
Query: 340 ETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKGCDTRNDKASTSIASENVGD-DAN 516
A+ E K S+ + S G K N E E V D DA
Sbjct: 61 R-----AKAEPKDNASMERCSGGSRGKNNLEE-----------------QMEAVRDNDAV 98
Query: 517 ELVWEEGRVPVSENKGGYSYDAGRELTIEFTD-TPSSSGKKLPRRFSAKDKELAELVHKV 693
++ WEEG V +E YS+D G +T+EF D PSS+ KK RR +A++KELAELVHKV
Sbjct: 99 DMDWEEGHVEQNE----YSHDLGETVTVEFADDVPSSTSKKTVRRATAEEKELAELVHKV 154
Query: 694 HLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXX-AVGEIQKLTANGLCYLVNWFRDNFQ 870
HLLCL+ARGR+VD CNDPLIQA + ++ L A L LV+WF F
Sbjct: 155 HLLCLIARGRVVDKACNDPLIQASILSLVPNHVLWSFTDVTNLRAVNLRNLVSWFHRTFC 214
Query: 871 VRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKPDTD 1050
V + +TDRGSF NLAF +Q GTAEEV ALSVALFRAL+LT RFV+ LDVA LKPDT
Sbjct: 215 VTAQSTDRGSFVSNLAFTIQDRVGTAEEVCALSVALFRALNLTARFVTNLDVAGLKPDTK 274
Query: 1051 MIGITKQDTGSLDIK-------------ISSPS-------TSVLVPHQIDVPSDVK---- 1158
++G QD L + +SSP+ SV + Q P K
Sbjct: 275 VMGTLNQDASRLCTRSLPYSSPAADGNVVSSPALLKDNTQDSVNMNQQRGGPGKSKQTSS 334
Query: 1159 ---SLDKTNDHI--DLASTSRACNDQLNSCATNLAQVSKRKGDMEFVLELERAISATAAA 1323
SL KT I D S+ + + QL S + N A+V KRKGD+EF L+LE A+SATAA
Sbjct: 335 CKRSLSKTLSSIKADNESSCISASSQLPSTSGN-AEVPKRKGDVEFELQLEMALSATAAE 393
Query: 1324 VPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSRRTGPPLYWAKV 1503
++ + + T +K LRQN A+WSR G PLYWA+V
Sbjct: 394 TQNNNQATHMSQSISSLQDSTPPMKKLRQNTEA------TSTSSAVWSRSAGAPLYWAEV 447
Query: 1504 YCNGESSTGRGVHVD 1548
YC+G++STGR VH D
Sbjct: 448 YCSGQASTGRWVHAD 462
>ref|XP_002444371.1| hypothetical protein SORBIDRAFT_07g020840 [Sorghum bicolor]
gi|241940721|gb|EES13866.1| hypothetical protein
SORBIDRAFT_07g020840 [Sorghum bicolor]
Length = 860
Score = 267 bits (682), Expect = 1e-68
Identities = 191/499 (38%), Positives = 249/499 (49%), Gaps = 36/499 (7%)
Frame = +1
Query: 160 RTRNQSKSA--EPPPAPVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALVGGKQ 333
RTR+QS S PP A +E RRR S +A K + +K T+ L ++
Sbjct: 3 RTRSQSASGGNTPPAAGPSAEVAG-------RRRASPAAKGK-SPATKVETASPLRNARR 54
Query: 334 PHETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKGCDTRNDKASTSIASENVGDDA 513
T + S G CD N + T N DA
Sbjct: 55 KGRPKTESKDNSSVETCSAGS------------------CDKNNLEEQTESLDNN---DA 93
Query: 514 NELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKELAELVHKV 693
E+ WEEG + E YS + +T+EF D PSS+ KK RR +A++KELAELVHKV
Sbjct: 94 AEMDWEEGHLEKIE----YSDELRETITVEFNDVPSSTNKKSVRRPTAEEKELAELVHKV 149
Query: 694 HLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXX-AVGEIQKLTANGLCYLVNWFRDNFQ 870
HLLCL+ARGR++D C+D LIQA + ++ L A L LV+WF F
Sbjct: 150 HLLCLIARGRVIDKACDDTLIQASVLSLVPYHLLWGLSDVPNLKAVNLRSLVSWFHRTFC 209
Query: 871 VRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKPDTD 1050
V + +TDRGSFK NLAF +Q H GTAEEV ALSVALFRAL+LT RFV+ LDVA LKPDT
Sbjct: 210 VTAQSTDRGSFKSNLAFTIQDHVGTAEEVCALSVALFRALNLTARFVTNLDVAGLKPDTK 269
Query: 1051 MIGITKQDTGSLDIKISSPSTSVLVPHQIDVPSDVK------------------------ 1158
+ G QD L + S+ + I P+ +K
Sbjct: 270 VKGTFSQDASRLCTRALPCSSPFSDDNMITTPALMKDNSQGSVSMNQQRGDLGKLKQDSA 329
Query: 1159 ---SLDKT-----NDH-IDLASTSRACNDQLNSCATNLAQVSKRKGDMEFVLELERAISA 1311
SL KT +DH ASTS+ + ++N A+V KRKGD+EF L+LE A+SA
Sbjct: 330 CKRSLSKTLSVIKSDHESSCASTSKDKSASNQFPSSNDAEVPKRKGDVEFELQLEMALSA 389
Query: 1312 TAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSRRTGPPLY 1491
TAA + K+ + + + +K +RQN A+WSR G PLY
Sbjct: 390 TAAETQNSKLATHMSQSTVSLQNSSPPLKKMRQN------VEAVSSSSAIWSRSAGAPLY 443
Query: 1492 WAKVYCNGESSTGRGVHVD 1548
WA+VYC G++STGR VHVD
Sbjct: 444 WAEVYCGGQASTGRWVHVD 462
>ref|XP_004289443.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Fragaria vesca subsp. vesca]
Length = 919
Score = 266 bits (679), Expect = 2e-68
Identities = 173/455 (38%), Positives = 252/455 (55%), Gaps = 17/455 (3%)
Frame = +1
Query: 235 SKPKRRRVSGSADSKITKRSKKATSDALVGGKQPHETGTSDAEREEKVKVSVGKNSEGKD 414
SK + SGS + K A GGK+ E+ ++ K + ++ + D
Sbjct: 3 SKKESASASGSLGELSEEAVAKLVRRANRGGKKKFESQLHPSDLIGKHEPGPQRDKKDVD 62
Query: 415 AKENANEIELKGC----------DTRNDKASTSIASENVGDDANELVWEEGRVPVSENKG 564
A+ +N +E + C DT D+ S + + ++ N+ WE+G VP+S + G
Sbjct: 63 ARVASNALETEVCSRDALRKVSRDTNGDEESFQCSFMDSREELNDSDWEDGPVPISNSMG 122
Query: 565 GYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKELAELVHKVHLLCLLARGRIVDDVCN 744
G+ E+TIE +TP S +K RR S +DKE+AELVHK HLLCL+ARGR++D C+
Sbjct: 123 GH------EVTIEINETPDSRRRKRSRRASVEDKEVAELVHKAHLLCLIARGRLIDRACD 176
Query: 745 DPLIQAXXXXXXXXXXXAVGEIQKLTANGLCYLVNWFRDNFQVRSHNTDRGSFKENLAFA 924
D LIQA V ++ KLT L LV WF++NF+VR+ + R SF L FA
Sbjct: 177 DALIQASLLSLLPEHLLRVSKVAKLTVKHLLPLVFWFQNNFRVRTTSV-RRSFHLALNFA 235
Query: 925 LQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISS 1104
L+T EGT EE+AALSVALFRAL+LTTR VSVL+VASLKP+ D + +D L I S
Sbjct: 236 LETREGTQEEIAALSVALFRALNLTTRLVSVLNVASLKPEADKTDWSSEDASRLSKGIFS 295
Query: 1105 PSTSVL----VPHQIDVPSDVKSLDKTNDHIDLASTSRAC---NDQLNSCATNLAQVSKR 1263
+T ++ VP S+ S+ +T I + AC ND +C T ++ KR
Sbjct: 296 TATPMVARKNVPVSPATSSERNSVGET-PQIGSYKYTLACEEWNDISEACHTKKSKELKR 354
Query: 1264 KGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXX 1443
+GD+EF ++++ A+SATA D K+ S +++ D +VA K L++ +
Sbjct: 355 RGDLEFEMQMQMALSATAVPTADIKLGSDNND-SDSNVA-----KRLKRTVCEESQFSSQ 408
Query: 1444 XXXGALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
A+ SR+ G PLYWA+VYCNGE+ TG+ +H+D
Sbjct: 409 SISTAVGSRKEGSPLYWAEVYCNGENLTGKWLHID 443
>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
vinifera]
Length = 1103
Score = 265 bits (678), Expect = 3e-68
Identities = 182/488 (37%), Positives = 250/488 (51%), Gaps = 38/488 (7%)
Frame = +1
Query: 199 APVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALVGGKQPHETGTSDAEREEKV 378
A + EA + RR SG K+ S++ S L+G K+ T +
Sbjct: 191 AEISREAVGKLLRRANPRRSSGIR--KLDSCSQQCESTGLIGSKRSEILDTGGRVTWNAL 248
Query: 379 -KVSVGKNSEGKDAKENANEIELKGCDTRNDKASTSIASENVGDDANELVWEEGRVPVSE 555
G+++ G+ E D+ S+ N G+D NE WEEG +P +
Sbjct: 249 DSEGCGRSAIGRSTLEK-----------EVDEKSSQDTYLNSGEDINESDWEEGSIPTLD 297
Query: 556 NKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKELAELVHKVHLLCLLARGRIVDD 735
+ + +E+TIE + SS +K RR SA+DKELAELVHKVHLLCLLARGR++D
Sbjct: 298 SVDNHQNAGIKEVTIELSGLLDSSQQKPIRRASAEDKELAELVHKVHLLCLLARGRLIDS 357
Query: 736 VCNDPLIQAXXXXXXXXXXXAVGEIQKLTANGLCYLVNWFRDNFQVRSHNTDRGSFKENL 915
CNDPL+QA + EI +LTAN LV WF DNF+VRS ++ +L
Sbjct: 358 ACNDPLVQASLLSLLPADLLKISEIPRLTANAFTLLVRWFHDNFRVRSPSSVERPLHSSL 417
Query: 916 AFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKPDTD--------------- 1050
AFAL+ HEGT EEVAALSVALFRAL+LTTRFVS+LDVA LKP D
Sbjct: 418 AFALEAHEGTPEEVAALSVALFRALNLTTRFVSILDVAPLKPGADKSESAIQNANRASGG 477
Query: 1051 ------MIGITKQDTGSLDIKISS--PSTSVLVPHQID--VPSDVKSLDKT--------N 1176
++ K S +K SS +V P Q + D+KS KT +
Sbjct: 478 IFDNSTLMVARKNQVSSSPVKSSSCHVKGNVCEPSQNNACTNKDLKSTRKTAQSTDSPIS 537
Query: 1177 DHI-DLASTSRACNDQL---NSCATNLAQVSKRKGDMEFVLELERAISATAAAVPDDKVD 1344
D + D S AC +Q C T+ + SKRKGD+EF ++LE A+SATA + +
Sbjct: 538 DQLNDRMLDSLACKEQFAISEDCITDKPEGSKRKGDLEFKMQLEMALSATAVGINESNGG 597
Query: 1345 SKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSRRTGPPLYWAKVYCNGESS 1524
S EL S + ++ +K +++ + A+ SR+ G PLYWA+V+C GE+
Sbjct: 598 SNVKELFSESSSFSSPLKRVKRIKIEEYPTPSQGISTAVGSRKIGAPLYWAEVFCTGENL 657
Query: 1525 TGRGVHVD 1548
TG+ VH+D
Sbjct: 658 TGKWVHID 665
>gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus notabilis]
Length = 962
Score = 265 bits (677), Expect = 4e-68
Identities = 176/492 (35%), Positives = 259/492 (52%), Gaps = 54/492 (10%)
Frame = +1
Query: 235 SKPKRRRVSGSADSKITKRSKKATSDALVGGKQPHETGTSDAE---REEKVKVSVGKNS- 402
S + R + ++++S+++ L +P GT + + ++ + VG S
Sbjct: 3 STKETTREKNPSPGALSEKSRESVGKLLTRPNKPRSRGTKNNDNNIQQYDLSSEVGNGSK 62
Query: 403 ----EGKDAKENANEIELKGCDTRNDKASTSIASENVG------------DDANELVWEE 534
+ D++ + +E GC T D A ++ E V ++ N+ WE+
Sbjct: 63 VNGIQDVDSRVKSVTLEAGGCST--DAARDTLREEKVDGGTLQDPLSDSREEMNDSDWED 120
Query: 535 GRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKELAELVHKVHLLCLLA 714
G +P S+ G +++TIEF +TP +K + +A+DKELAE+VHKVHLLCLL
Sbjct: 121 GSIPNSDFTGN------QQVTIEFDETPDPVKRKPVHQATAEDKELAEIVHKVHLLCLLG 174
Query: 715 RGRIVDDVCNDPLIQAXXXXXXXXXXXAVGEIQKLTANGLCYLVNWFRDNFQVRSHNTDR 894
RGR++D C+DPL QA + ++ KLTA L L++WF+DNF VRS ++
Sbjct: 175 RGRLIDRACDDPLTQAALLSLLPRHLLNISQMTKLTAKNLHPLIHWFQDNFHVRSSTDEK 234
Query: 895 GSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKPDTDMIGITKQD 1074
S NLAFAL+THEGT+EE+AALSVALFRAL L TRFVS+LDVASLKPD D QD
Sbjct: 235 RSIHSNLAFALETHEGTSEEIAALSVALFRALGLITRFVSILDVASLKPDGDKSAYFSQD 294
Query: 1075 TGSLDIKISSP-----STSVLVPHQIDVPSDVKSLDKTN----------DHIDLASTSRA 1209
G S+P + + P + P++ S +T+ + D AS + +
Sbjct: 295 AGGFIFCTSTPMVAKKNEASSSPSKSFSPNEKDSACETSHRSSCKRSNAESKDSASANES 354
Query: 1210 CN------------DQLNSCATNLAQVSKRKGDMEFVLELERAISATAAA---VPDDKVD 1344
N D +C T ++Q KRKGD+EF L++E AISATAA + D K+
Sbjct: 355 SNKQPCPLVFELKHDSSGACHTQISQGPKRKGDIEFSLQMEMAISATAAVIANIADGKMG 414
Query: 1345 SK----SDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSRRTGPPLYWAKVYCN 1512
S + LP+ ++P +K + + A+ SRR G PLYWA+VYC+
Sbjct: 415 SSMGNPNSNLPN-FISPFKRMKKVLSEGSSSSHGIST----AIGSRRVGSPLYWAEVYCS 469
Query: 1513 GESSTGRGVHVD 1548
GE+ TG+ VHVD
Sbjct: 470 GENLTGKWVHVD 481
>gb|EMS61539.1| DNA repair protein complementing XP-C cells-like protein [Triticum
urartu]
Length = 895
Score = 263 bits (671), Expect = 2e-67
Identities = 189/513 (36%), Positives = 270/513 (52%), Gaps = 49/513 (9%)
Frame = +1
Query: 157 MRTRNQSKSA-EPPPAPVDSEAGTS------TGSKPKRRRVSGSADSKITKRSKKATSDA 315
MRTR Q++ +PPPA + +G G RRR S +A+ + + KA +
Sbjct: 1 MRTRGQTRGEPKPPPASFPASSGRGGAEEVVAGGANNRRRASLAAEGE--SPATKARAQM 58
Query: 316 LVGGKQPHETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKGCDTRND--KASTSIA 489
V G+ E E + + K GK E ++ K C + K
Sbjct: 59 PVAGQ---------VELESALGI---KRKNGKVNTERNDDTGKKRCSVGSSGKKKLEEKE 106
Query: 490 SENVGD-DANELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDK 666
E +GD DA + WE+G V E K GYS+D G +T+EFTD PSS+ KK RR +A++K
Sbjct: 107 PEAIGDNDAAGMEWEDGHVSPVERKEGYSHDLGETVTVEFTDVPSSTEKKSVRRHTAEEK 166
Query: 667 ELAELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVG-EIQKLTANGLCYL 843
ELAEL+HKVHLLCLLARGR++D CNDPLIQA G + KL AN L L
Sbjct: 167 ELAELMHKVHLLCLLARGRVIDKACNDPLIQASVLSVLPQHLLWNGVDTLKLDANKLRSL 226
Query: 844 VNWFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEE-VAALS---VALFRALDLTTRFV 1011
V+WF F + + + D+GSF+ N+AFALQ+HEGTAEE + L+ A+ L + RFV
Sbjct: 227 VSWFHRTFSIIARSADKGSFESNMAFALQSHEGTAEEHIVKLTHKWFAMQPYLSTSCRFV 286
Query: 1012 SVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSV---------LVPHQIDVPSDVKSL 1164
+ +DV LKPD +G QD L + + P +SV L P +++V ++ S
Sbjct: 287 TNMDVVGLKPDAKAVGTPNQDGTRLSTR-ALPCSSVAAGHNEFNTLSPARLEVNTE-HSF 344
Query: 1165 DKTNDHIDLASTSR--AC---NDQLNSC--------------------ATNLAQVSKRKG 1269
++T DL + R AC + L++C ++ A++ KRKG
Sbjct: 345 NRTKQRGDLGNLKRTSACKSLSKNLSNCKADQYASTSKDESSSSSNPFTSSTAEIPKRKG 404
Query: 1270 DMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXX 1449
D+EF L+L+ A+SAT A + + + S + ++ +T +K LR+N V
Sbjct: 405 DVEFELQLQMALSATGAEIQEKLAATSSQSIG--TLLDSTPLKKLRKNAEV------ASN 456
Query: 1450 XGALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
A+WS R+GPPLYWA+VYC G++ TGR VHVD
Sbjct: 457 SSAVWS-RSGPPLYWAEVYCGGQTLTGRWVHVD 488
>ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citrus clementina]
gi|557532630|gb|ESR43813.1| hypothetical protein
CICLE_v10010990mg [Citrus clementina]
Length = 974
Score = 261 bits (668), Expect = 4e-67
Identities = 187/520 (35%), Positives = 266/520 (51%), Gaps = 56/520 (10%)
Frame = +1
Query: 157 MRTRNQSKSAEPPPAPVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALVGGKQP 336
MRTR SK+ + ++G + R ++S + A + GK
Sbjct: 1 MRTRQDSKT----------QKDQASGKESTVRGALRDSESSHNETGTLAETSREGVGKFL 50
Query: 337 HETGTSDAEREEKVKVSVG--------KNSEGKDAKENANEIELKGCDTRNDKAST---- 480
+ R +K +VG + D + ++++ GC +R+ +T
Sbjct: 51 RRVNARSSSRSKKQDCAVGLPTSVLKVSGKQEVDKRVTWSDVDAHGC-SRDAMGNTLREV 109
Query: 481 --SIASENVGDDANELV---WEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPR 645
+NV D E+ WE+G +PV+ +K + + +TIEF D S KK R
Sbjct: 110 DEGRLQDNVLDGGEEMYDSDWEDGSIPVACSKENHPESDIKGVTIEF-DAADSVTKKPVR 168
Query: 646 RFSAKDKELAELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVGEIQKLTA 825
R SA+DKELAELVHKVHLLCLLARGR++D VC+DPLIQA + E+ KLTA
Sbjct: 169 RASAEDKELAELVHKVHLLCLLARGRLIDSVCDDPLIQASLLSLLPSYLLKISEVSKLTA 228
Query: 826 NGLCYLVNWFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTR 1005
N L +V+WF DNF VRS + R SF LA AL++ EGT EE+AALSVALFRAL LTTR
Sbjct: 229 NALSPIVSWFHDNFHVRSSVSTRRSFHSALAHALESREGTPEEIAALSVALFRALKLTTR 288
Query: 1006 FVSVLDVASLKPDTDMIGITKQDTGSLDIKI-SSPSTSVLVPHQIDVPSDVKSL--DKTN 1176
FVS+LDVASLKP+ D + QD+ + I ++P+ V P ++ + S VKS DK
Sbjct: 289 FVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEV-LASPVKSFSCDKKE 347
Query: 1177 DHIDLA-----------------------------------STSRACNDQLNSC-ATNLA 1248
+ + + S+S AC+D +C +
Sbjct: 348 NVCETSSKGLPECKYSSPKSNNTQSKKSPVSCELSSRNLDPSSSMACSDISEACHPKEKS 407
Query: 1249 QVSKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDX 1428
Q KRKGD+EF ++LE A+SAT A + S +L + + + SVK L++ + +
Sbjct: 408 QALKRKGDLEFEMQLEMALSATNVATSKSNICSDVKDL-NSNSSTVLSVKRLKKIESGES 466
Query: 1429 XXXXXXXXGALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
A+ SR+ G PLYWA+VYC+GE+ TG+ VHVD
Sbjct: 467 STSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVD 506
>ref|XP_006826912.1| hypothetical protein AMTR_s00010p00163020 [Amborella trichopoda]
gi|548831341|gb|ERM94149.1| hypothetical protein
AMTR_s00010p00163020 [Amborella trichopoda]
Length = 918
Score = 260 bits (665), Expect = 1e-66
Identities = 159/372 (42%), Positives = 218/372 (58%), Gaps = 29/372 (7%)
Frame = +1
Query: 520 LVWEEGRVPVSENKGGYSYDA-GRELTIEFTDTPSSSGKKLPRRFSAKDKELAELVHKVH 696
L WE+G + S + + +E+ +EF+ TPSS+ ++ RR SA DKEL ELVHKVH
Sbjct: 59 LDWEDGNISFSNTEVPCIPETLEQEVIVEFSGTPSSAKRQNVRRISAIDKELVELVHKVH 118
Query: 697 LLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVGEIQKLTANGLCYLVNWFRDNFQVR 876
LLCLLARGR+VD C+DPLIQA + E+QKLTA+ L LV WFR NF VR
Sbjct: 119 LLCLLARGRLVDAACDDPLIQASLLSLLPPHLLKISEVQKLTADLLVPLVEWFRANFHVR 178
Query: 877 SHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKPDTDMI 1056
+ + ++ FKE+LA A++T EGT EEVAALSVALFRAL+L+TRF+++LDV SLKPD D
Sbjct: 179 NESIEKMPFKESLAAAIETREGTPEEVAALSVALFRALNLSTRFLAMLDVTSLKPDADQA 238
Query: 1057 GITKQDT------------------GSLDIKISSPSTSVLVPHQIDVPSDVKSLDKTNDH 1182
+ + G + K+ SP S+ H+ + D+ N+
Sbjct: 239 VYSSPEADDSVKGRTFNSSRPIANLGDVFAKL-SPQASL---HKRKLNEDIGLTSPQNEG 294
Query: 1183 IDLASTSRACNDQ--------LNSC--ATNLAQVSKRKGDMEFVLELERAISATAAAVPD 1332
+ + D+ +SC TN +VSKRKGD+EF L++E A+SATAA V +
Sbjct: 295 KHIKENDTSSKDKRTGYKSSDAHSCNLETNHFKVSKRKGDVEFELQMEMALSATAAGVFE 354
Query: 1333 DKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSRRTGPPLYWAKVYCN 1512
KV+ + + P S TT+ K+ + + A+WSR+ GPPLYWA+VYCN
Sbjct: 355 SKVEQEMQQKPHSS--STTNSKLNIKEKKLKSEVISERNSFAVWSRKMGPPLYWAEVYCN 412
Query: 1513 GESSTGRGVHVD 1548
GE+ +GR VHVD
Sbjct: 413 GETLSGRWVHVD 424
>ref|XP_006482096.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Citrus sinensis]
Length = 974
Score = 258 bits (660), Expect = 4e-66
Identities = 187/520 (35%), Positives = 266/520 (51%), Gaps = 56/520 (10%)
Frame = +1
Query: 157 MRTRNQSKSAEPPPAPVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALVGGKQP 336
MRTR SK+ + ++G + R ++S + A + GK
Sbjct: 1 MRTRQDSKT----------QKDQASGKESTVRGALRDSESSHNETGTLAETSREGVGKFL 50
Query: 337 HETGTSDAEREEKVKVSVGKNSE-----GK---DAKENANEIELKGCDTRNDKAST---- 480
+ R +K +VG + GK D + ++++ GC +R+ +T
Sbjct: 51 RHVNARSSSRSKKQDCAVGLTTSVLKVSGKQEVDKRVTWSDVDAHGC-SRDAMGNTLREL 109
Query: 481 --SIASENVGDDANELV---WEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPR 645
+NV D E+ WE+G +PV+ +K + + +TIEF D S KK R
Sbjct: 110 DEGRLQDNVLDGGEEMYDSDWEDGSIPVACSKENHPESDIKGVTIEF-DAADSVTKKPVR 168
Query: 646 RFSAKDKELAELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVGEIQKLTA 825
R SA+DKELAELVHKVHLLCLLARGR++D VC+DPLIQA + E+ KLTA
Sbjct: 169 RASAEDKELAELVHKVHLLCLLARGRLIDSVCDDPLIQASLLSLLPSYLLKISEVSKLTA 228
Query: 826 NGLCYLVNWFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTR 1005
N L +V+WF DNF VRS + R SF LA AL++ EGT EE+AALSVALFRAL LTTR
Sbjct: 229 NALSPIVSWFHDNFHVRSSVSTRRSFHSALAHALESREGTPEEIAALSVALFRALKLTTR 288
Query: 1006 FVSVLDVASLKPDTDMIGITKQDTGSLDIKI-SSPSTSVLVPHQIDVPSDVKSL--DKTN 1176
FVS+LDVASLKP+ D + QD+ + I ++P+ V P ++ + S VKS DK
Sbjct: 289 FVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEV-LASPVKSFSCDKKE 347
Query: 1177 DHIDLA-----------------------------------STSRACNDQLNSC-ATNLA 1248
+ + + S+S AC+D +C +
Sbjct: 348 NVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMACSDISEACHPKEKS 407
Query: 1249 QVSKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDX 1428
Q KRKGD+EF ++LE A+SAT + S +L + + + VK L++ + +
Sbjct: 408 QALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDL-NSNSSTVLPVKRLKKIESGES 466
Query: 1429 XXXXXXXXGALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
A+ SR+ G PLYWA+VYC+GE+ TG+ VHVD
Sbjct: 467 STSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVD 506
>ref|XP_006482097.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X2 [Citrus sinensis]
Length = 954
Score = 256 bits (654), Expect = 2e-65
Identities = 177/464 (38%), Positives = 247/464 (53%), Gaps = 56/464 (12%)
Frame = +1
Query: 325 GKQPHETGTSDAEREEKVKVSVGKNSE-----GK---DAKENANEIELKGCDTRNDKAST 480
GK + R +K +VG + GK D + ++++ GC +R+ +T
Sbjct: 27 GKFLRHVNARSSSRSKKQDCAVGLTTSVLKVSGKQEVDKRVTWSDVDAHGC-SRDAMGNT 85
Query: 481 ------SIASENVGDDANELV---WEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGK 633
+NV D E+ WE+G +PV+ +K + + +TIEF D S K
Sbjct: 86 LRELDEGRLQDNVLDGGEEMYDSDWEDGSIPVACSKENHPESDIKGVTIEF-DAADSVTK 144
Query: 634 KLPRRFSAKDKELAELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVGEIQ 813
K RR SA+DKELAELVHKVHLLCLLARGR++D VC+DPLIQA + E+
Sbjct: 145 KPVRRASAEDKELAELVHKVHLLCLLARGRLIDSVCDDPLIQASLLSLLPSYLLKISEVS 204
Query: 814 KLTANGLCYLVNWFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALD 993
KLTAN L +V+WF DNF VRS + R SF LA AL++ EGT EE+AALSVALFRAL
Sbjct: 205 KLTANALSPIVSWFHDNFHVRSSVSTRRSFHSALAHALESREGTPEEIAALSVALFRALK 264
Query: 994 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKI-SSPSTSVLVPHQIDVPSDVKSL-- 1164
LTTRFVS+LDVASLKP+ D + QD+ + I ++P+ V P ++ + S VKS
Sbjct: 265 LTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEV-LASPVKSFSC 323
Query: 1165 DKTNDHIDLA-----------------------------------STSRACNDQLNSC-A 1236
DK + + + S+S AC+D +C
Sbjct: 324 DKKENVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMACSDISEACHP 383
Query: 1237 TNLAQVSKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNN 1416
+Q KRKGD+EF ++LE A+SAT + S +L + + + VK L++
Sbjct: 384 KEKSQALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDL-NSNSSTVLPVKRLKKIE 442
Query: 1417 AVDXXXXXXXXXGALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
+ + A+ SR+ G PLYWA+VYC+GE+ TG+ VHVD
Sbjct: 443 SGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVD 486
>ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa]
gi|550340612|gb|EEE86385.2| hypothetical protein
POPTR_0004s08580g [Populus trichocarpa]
Length = 898
Score = 250 bits (639), Expect = 1e-63
Identities = 174/480 (36%), Positives = 250/480 (52%), Gaps = 16/480 (3%)
Frame = +1
Query: 157 MRTRNQSKSAEPPPAPVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALVGGKQP 336
MRTR+ +K + + V + + S +S A K+ +R K S KQ
Sbjct: 1 MRTRSNNKQSSGKESTVSAIRDVDSESLAD---MSNEAVDKLVRRVKGRGSSGKK--KQD 55
Query: 337 HETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKGCDTRNDKASTSIASENVGDDAN 516
+ A E S GK + DA+ N+++ +G T ++ + +
Sbjct: 56 NRLQCDSAATGENGLKSNGK--QVVDARVTWNDLDARGFQTTFQESD---------QEMD 104
Query: 517 ELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKELAELVHKVH 696
++ WE+G + + + D RE+TIEF+++P S+ +K RR +A++K LAELVHKVH
Sbjct: 105 DIDWEDGSSSILGHVKNHPGDGIREVTIEFSESPDSAKRKPIRRATAEEKGLAELVHKVH 164
Query: 697 LLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVGEIQKLTANGLCYLVNWFRDNFQVR 876
LLCLLARGRI+D C+DPLIQA KL A L L +WF +NF V
Sbjct: 165 LLCLLARGRIIDHACDDPLIQASLLSILPAHLSNTLGDPKLHAKALSPLAHWFHNNFHVA 224
Query: 877 SHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKPDTDMI 1056
S +++ SF L+ AL+T EGT EE+AALSVALFRAL LTTRFVS+LDVAS+KPD D
Sbjct: 225 SSVSEKRSFHSALSCALETREGTLEELAALSVALFRALKLTTRFVSILDVASIKPDADKY 284
Query: 1057 GITKQDTGSLDIKISSPSTSVL-VPHQIDVPSDVKSLDKTNDHIDLASTSRA-------- 1209
Q T + I + ST ++ P ++ +P S ++ + I + A
Sbjct: 285 ESLSQGTSKMHRGIFNTSTLMVDRPKEVFIPPKSLSCNEKKNKIQSNDSPPAVELKDKMV 344
Query: 1210 ----CNDQLNS---CATNLAQVSKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPD 1368
C Q N+ C T +Q SKRKGD+EF ++L+ A+SATA A +K ++ +
Sbjct: 345 DTFPCEAQNNTSEECVTKKSQGSKRKGDLEFEMQLQMAMSATAVATQ----SNKELDVKE 400
Query: 1369 CSVAPTTSVKMLRQNNAVDXXXXXXXXXGALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
S + S R + AL SR+ G PLYWA+VYC+GE+ TG+ VHVD
Sbjct: 401 SSNSSDVSSPFKRIRKIANEESSSQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVD 460
>gb|EMJ18890.1| hypothetical protein PRUPE_ppa001034mg [Prunus persica]
Length = 927
Score = 244 bits (624), Expect = 6e-62
Identities = 172/512 (33%), Positives = 257/512 (50%), Gaps = 48/512 (9%)
Frame = +1
Query: 157 MRTRNQSKSAEPPPAPVDSEAGTSTGSKPKRRRVSGSADSKITKRSKKATSDALVGGKQP 336
MR++N++K ++ +S +GT VS A K+ +R K G++
Sbjct: 1 MRSKNETKRSK------ESSSGTLAD-------VSLEAVGKLLRRCNKT-------GRKK 40
Query: 337 HETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKG----------CDTRNDKASTSI 486
E + K + ++ E D++ N +E G + + D+ S
Sbjct: 41 FENSLRQCDSIGKSESGAKRDEEDVDSRVRGNSLETAGGSKDAKKKVSWEEKVDRESFQC 100
Query: 487 ASENVGDDANELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDK 666
+ + ++ ++ WE+G VP+ + G + E+TIE +TP S+ +K RR SA+DK
Sbjct: 101 SFTDTKEELDDADWEDGPVPILNSVGDH------EVTIELNETPDSTRRKRIRRASAEDK 154
Query: 667 ELAELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVGEIQKLTANGLCYLV 846
ELAELVHKVHLLCLLARGR++D C+D LIQA + ++ K T L LV
Sbjct: 155 ELAELVHKVHLLCLLARGRLIDRACDDALIQATLLSLLPVHLLHISKVAKPTVKDLRPLV 214
Query: 847 NWFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDV 1026
WF++NF+VRS + + SF L FAL+THEGT EE+AALSVALFRAL+LTTRFVS+LDV
Sbjct: 215 FWFQNNFRVRSTSVSK-SFYSALTFALETHEGTQEEIAALSVALFRALNLTTRFVSILDV 273
Query: 1027 ASLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPHQIDVPSDVKSLDKTNDHIDLASTSR 1206
ASLKPD D + +D I S ST ++ Q DV + N+ ++ TS+
Sbjct: 274 ASLKPDADKTEYSSEDASRSSRGIFSTSTPMVARKQ-DVSVSLGKSPSCNERDNVCGTSQ 332
Query: 1207 --------------------ACN------------------DQLNSCATNLAQVSKRKGD 1272
+CN D + +Q KR+GD
Sbjct: 333 MGSCRSKDCHPTSNNTPPKGSCNAYEVNDRMLDTLACGAHHDISEAVLNKKSQGLKRRGD 392
Query: 1273 MEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXX 1452
+EF ++L+ A+SATA D ++ S + L + K +++ + +
Sbjct: 393 LEFEMQLKMALSATAVPTADREMGSGVNYLN--GNENFSYSKRMKRIVSEESRNSSQSIS 450
Query: 1453 GALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
A+ SR+ G PLYWA+VYC GE+ TG+ VH+D
Sbjct: 451 TAVGSRKVGSPLYWAEVYCKGENLTGKWVHID 482
>ref|XP_004250530.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Solanum
lycopersicum]
Length = 928
Score = 244 bits (624), Expect = 6e-62
Identities = 182/516 (35%), Positives = 257/516 (49%), Gaps = 52/516 (10%)
Frame = +1
Query: 157 MRTRNQSKSAEPPPAPVDS-----EAGTSTGSKPKRR------RVSGSADSKITKRSKKA 303
MRTRNQ+K A DS E + +G K + +S A K+ KR K+
Sbjct: 1 MRTRNQAKRQNQSTASEDSLKHYGEKESQSGCKDEASGNETLANISRGAVGKLLKRVNKS 60
Query: 304 -------TSDALVGGKQP---HETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKGC 453
T D+ + + E G+S+AE++ V + K + L+
Sbjct: 61 RGSRGLKTDDSYLRKQDTIVEPENGSSEAEKQLTGTTVVRTTLDAKCCTTDV----LQNV 116
Query: 454 DTRNDKASTSIASENVG--DDANELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSS 627
+ + ST + +++ D+ + + WE+G V +++ D +T+EF P S
Sbjct: 117 PSEVEHGSTDVQCQSIEREDELDGIDWEDGPVDTLKSESNVKEDTINGVTVEFDAPPDPS 176
Query: 628 GKKLPRRFSAKDKELAELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVGE 807
+K RR +A++KELAELVHKV+LLCLLARGR VD CNDPLIQA + +
Sbjct: 177 KQKTVRRATAQEKELAELVHKVNLLCLLARGRFVDSACNDPLIQASLLSLLPAHLLKLTD 236
Query: 808 IQKLTANGLCYLVNWFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRA 987
KLTA L LVNW +F+VR N F LA L++ EGT EEVAALSVALFRA
Sbjct: 237 APKLTAKALAPLVNWIHSHFRVRGANDMEKPFHSALASTLESQEGTPEEVAALSVALFRA 296
Query: 988 LDLTTRFVSVLDVASLKPDTDMI-----GITKQDTG---SLDIKISSPSTSVLVP----- 1128
L+LTTRFVS+LDVASLKP+ + G +K +G S + ++ P S L P
Sbjct: 297 LNLTTRFVSILDVASLKPEIEKSYPSGKGPSKAGSGIFSSSTLMVAGPKCSPLSPAKSMA 356
Query: 1129 ---HQIDVPSDVKSLDKTNDHID-----------LASTSRACNDQLNSCATNLAQVSKRK 1266
H + + + TND ASTS A D ++C Q KRK
Sbjct: 357 YGKHNVSDKTSTSAGQATNDKSRETITDKSNKRMSASTSDAQGDSNDACIKKKEQ-PKRK 415
Query: 1267 GDMEFVLELERAISATAAAVPDDKV--DSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXX 1440
GD+EF ++LE A+S TA + + + D K +V+P K+ A +
Sbjct: 416 GDLEFEMQLEMALSTTAVEIARNTMISDVKDVGSTSSNVSPFKKKKI----KAEECSTSS 471
Query: 1441 XXXXGALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
A+ S++ G PLYWA+VYC+GE+ TG+ VHVD
Sbjct: 472 HGISTAVGSKKVGAPLYWAEVYCSGENLTGKWVHVD 507
>ref|XP_006364631.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Solanum tuberosum]
Length = 928
Score = 244 bits (623), Expect = 7e-62
Identities = 182/517 (35%), Positives = 257/517 (49%), Gaps = 53/517 (10%)
Frame = +1
Query: 157 MRTRNQSKSAEPPPAPVDS-----EAGTSTGSKPKRR------RVSGSADSKITKRSKKA 303
MRTRNQ+K A DS E + +G K + +S A K+ KR K+
Sbjct: 1 MRTRNQAKRQNQSTANEDSLKHYGEMESRSGCKDEASGNETLANISRGAVGKLLKRVNKS 60
Query: 304 -------TSDALVGGKQPH---ETGTSDAEREEKVKVSVGKNSEGKDAKENANEIELKGC 453
T D+ + + E G+S+AE++ V + K + L+
Sbjct: 61 RGSRGLKTDDSYLRKQDTMGEPENGSSEAEKQLTGTTVVRTTLDAKCCTTDV----LQNV 116
Query: 454 DTRNDKASTSIASENVG--DDANELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSS 627
+ ST + +++ D+ + + WE+G V +++ D +T+EF TP S
Sbjct: 117 PLEVENGSTDVQCQSIEREDELDGIDWEDGPVDTLKSESNVKEDTINGVTVEFDATPDPS 176
Query: 628 GKKLPRRFSAKDKELAELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVGE 807
+K RR +A++KELAELVHKV+LLCLLARGR+VD CNDPLIQA + +
Sbjct: 177 KQKTVRRATAEEKELAELVHKVNLLCLLARGRLVDSACNDPLIQASLLSLLPAHLLKLTD 236
Query: 808 IQKLTANGLCYLVNWFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRA 987
KLTA L LVNW +F+VR N F LA L++ EGT EEVAALSVALFRA
Sbjct: 237 APKLTAKALAPLVNWCHSHFRVRGANDTEKPFHSALASTLESQEGTPEEVAALSVALFRA 296
Query: 988 LDLTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPHQIDVPSDVKSL- 1164
L+LTTRFVS+LDVASLKP+ + + + I S ST ++V + S KS+
Sbjct: 297 LNLTTRFVSILDVASLKPEIEKSYPSGKGPSRAGSGIFSSSTLMVVGPKCSPLSPAKSMA 356
Query: 1165 ---------------------------DKTNDHIDLASTSRACNDQLNSCATNLAQVSKR 1263
DK+N + ASTS A D ++C + KR
Sbjct: 357 YGKHNVSDKTLTSAGQATNDKSRETITDKSNKRMS-ASTSDAQGDSNDACIIK-KERPKR 414
Query: 1264 KGDMEFVLELERAISATAAAVPDDKV--DSKSDELPDCSVAPTTSVKMLRQNNAVDXXXX 1437
KGD+EF ++LE A+S TA + + + D K +V+P K+ A +
Sbjct: 415 KGDLEFEMQLEMALSTTAVEIARNTMISDVKDVGSTSSNVSPFKKKKI----KAEECSTS 470
Query: 1438 XXXXXGALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
A+ SR+ G PLYWA+VYC+GE+ TG+ VHVD
Sbjct: 471 SHGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVD 507
>gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma cacao]
Length = 974
Score = 242 bits (617), Expect = 4e-61
Identities = 169/476 (35%), Positives = 232/476 (48%), Gaps = 72/476 (15%)
Frame = +1
Query: 337 HETGTSDAEREEKV-KVSVGKNSEGKDAKENANEIELKGCDTRNDKASTSIASENVG--- 504
H+ GT +E V K+ N G KE NE K N++ ++ +N
Sbjct: 17 HDAGTLAGISQEGVNKLLRRANRRGSSRKEEKNEYLQKNDPKTNEQVVHTMIVQNASMAE 76
Query: 505 ---------------------------DDANELVWEEGRVPVSENKGGYSYDAGRELTIE 603
+D N+ WE+G +P + + + LTIE
Sbjct: 77 GCSRNAVGSSQLEVDVGSYVDNLFDDSEDMNDSDWEDGSIPKLDPVDNSPKERMKGLTIE 136
Query: 604 FTDTPSSSGKKLPRRFSAKDKELAELVHKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXX 783
F + S+G+K RR SA+DKE+AELVHKVHLLCLLARGR++D+ C+DPLIQA
Sbjct: 137 FDEPSGSAGRKPVRRASAEDKEIAELVHKVHLLCLLARGRLIDNACDDPLIQASLLSLVP 196
Query: 784 XXXXAVGEIQKLTANGLCYLVNWFRDNFQVRSHNTDRGSFKENLAFALQTHEGTAEEVAA 963
+ + +T+N L LV WF +NF VRS SF LAFAL+T EGT EE+AA
Sbjct: 197 THLSKISGVSNITSNALSPLVTWFHNNFHVRSLVRAERSFHTALAFALETREGTPEEIAA 256
Query: 964 LSVALFRALDLTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLV-PHQID 1140
LSVALFRAL T RFVS+LDVASLKP+ D + Q+ + I S ST ++ P ++
Sbjct: 257 LSVALFRALKFTARFVSILDVASLKPEADKCEPSSQEANRVGGGIFSTSTLMVANPKEVS 316
Query: 1141 VPS-DVKSLD----------------------------------KTNDHIDLASTSRACN 1215
S VKS ++ D S AC
Sbjct: 317 SSSYPVKSFSCSEKDGHCENSLRSSCKSKGGCPTSNDTQSRYSTAVDEVTDRTSNLFACQ 376
Query: 1216 DQLNS---CATNLAQVSKRKGDMEFVLELERAISATAAAVPDDKVDS--KSDELPDCSVA 1380
QL++ CA +Q KRKGD+EF ++L AISAT ++ S S+ + S+
Sbjct: 377 AQLDTYGQCAPTKSQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLD 436
Query: 1381 PTTSVKMLRQNNAVDXXXXXXXXXGALWSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
+T K ++ + V+ AL SR+ G PL+WA+VYC GE+ TG+ VHVD
Sbjct: 437 ASTPSKRWKKIHRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVD 492
>gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma cacao]
Length = 908
Score = 241 bits (615), Expect = 6e-61
Identities = 154/389 (39%), Positives = 209/389 (53%), Gaps = 41/389 (10%)
Frame = +1
Query: 505 DDANELVWEEGRVPVSENKGGYSYDAGRELTIEFTDTPSSSGKKLPRRFSAKDKELAELV 684
+D N+ WE+G +P + + + LTIEF + S+G+K RR SA+DKE+AELV
Sbjct: 38 EDMNDSDWEDGSIPKLDPVDNSPKERMKGLTIEFDEPSGSAGRKPVRRASAEDKEIAELV 97
Query: 685 HKVHLLCLLARGRIVDDVCNDPLIQAXXXXXXXXXXXAVGEIQKLTANGLCYLVNWFRDN 864
HKVHLLCLLARGR++D+ C+DPLIQA + + +T+N L LV WF +N
Sbjct: 98 HKVHLLCLLARGRLIDNACDDPLIQASLLSLVPTHLSKISGVSNITSNALSPLVTWFHNN 157
Query: 865 FQVRSHNTDRGSFKENLAFALQTHEGTAEEVAALSVALFRALDLTTRFVSVLDVASLKPD 1044
F VRS SF LAFAL+T EGT EE+AALSVALFRAL T RFVS+LDVASLKP+
Sbjct: 158 FHVRSLVRAERSFHTALAFALETREGTPEEIAALSVALFRALKFTARFVSILDVASLKPE 217
Query: 1045 TDMIGITKQDTGSLDIKISSPSTSVLV-PHQIDVPS-DVKSLD----------------- 1167
D + Q+ + I S ST ++ P ++ S VKS
Sbjct: 218 ADKCEPSSQEANRVGGGIFSTSTLMVANPKEVSSSSYPVKSFSCSEKDGHCENSLRSSCK 277
Query: 1168 -----------------KTNDHIDLASTSRACNDQLNS---CATNLAQVSKRKGDMEFVL 1287
++ D S AC QL++ CA +Q KRKGD+EF +
Sbjct: 278 SKGGCPTSNDTQSRYSTAVDEVTDRTSNLFACQAQLDTYGQCAPTKSQGLKRKGDLEFEM 337
Query: 1288 ELERAISATAAAVPDDKVDS--KSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXXGAL 1461
+L AISAT ++ S S+ + S+ +T K ++ + V+ AL
Sbjct: 338 QLAMAISATTVGTLENSAGSLDVSNFNGNNSLDASTPSKRWKKIHRVESATSSQGLSTAL 397
Query: 1462 WSRRTGPPLYWAKVYCNGESSTGRGVHVD 1548
SR+ G PL+WA+VYC GE+ TG+ VHVD
Sbjct: 398 GSRKVGSPLFWAEVYCGGENLTGKWVHVD 426