BLASTX nr result

ID: Zingiber24_contig00038481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00038481
         (546 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002442830.1| hypothetical protein SORBIDRAFT_08g003550 [S...    57   4e-06

>ref|XP_002442830.1| hypothetical protein SORBIDRAFT_08g003550 [Sorghum bicolor]
           gi|241943523|gb|EES16668.1| hypothetical protein
           SORBIDRAFT_08g003550 [Sorghum bicolor]
          Length = 270

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 44/121 (36%), Positives = 56/121 (46%), Gaps = 23/121 (19%)
 Frame = -3

Query: 544 VVLFERPRYG---GERLYIGCRYRGENEXXXXXXXXXXXSVTMPAVA-------RPWTAV 395
           VV FER R G   G+RL+I CR RGE+             V  PA A       +PW+ +
Sbjct: 125 VVRFERVRGGLGTGDRLFICCRRRGESAAPTPTPPLP---VRAPAPALNAAGEQQPWSPM 181

Query: 394 PQHSS-------------LHAEDPGDGVIVLQSEAVAPANSKRLRLFGVNLDFWPEPEPQ 254
              +S              H + P  G    +S     A S++LRLFGVNLD  PEPEP+
Sbjct: 182 CYSTSGSSYPTSPASPYAYHNDTPHAGEADAKSSGTPTAPSRKLRLFGVNLDCGPEPEPE 241

Query: 253 P 251
           P
Sbjct: 242 P 242


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