BLASTX nr result

ID: Zingiber24_contig00038416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber24_contig00038416
         (311 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004891584.1| unnamed protein product (chloroplast) [Nicot...    60   3e-07
ref|YP_398843.1| hypothetical protein NitoCp007 [Nicotiana tomen...    60   4e-07
emb|CAJ32479.1| hypothetical protein [Nicotiana tabacum]               60   4e-07

>ref|YP_004891584.1| unnamed protein product (chloroplast) [Nicotiana undulata]
           gi|347453885|gb|AEO95543.1| hypothetical protein
           (chloroplast) [Nicotiana undulata]
           gi|347453996|gb|AEO95653.1| hypothetical protein
           [synthetic construct]
          Length = 90

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 28/34 (82%), Positives = 33/34 (97%)
 Frame = -2

Query: 148 ASGERGIRTLGTNNSYNGLAIRRFSPLSHLSKLQ 47
           ++G+RGIRTLGT NSYNGLAIRRFSPLSHLS+L+
Sbjct: 52  SNGKRGIRTLGTINSYNGLAIRRFSPLSHLSQLK 85


>ref|YP_398843.1| hypothetical protein NitoCp007 [Nicotiana tomentosiformis]
           gi|80750905|dbj|BAE47981.1| hypothetical protein
           [Nicotiana tomentosiformis]
          Length = 90

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 145 SGERGIRTLGTNNSYNGLAIRRFSPLSHLSKLQ 47
           +G+RGIRTLGT NSYNGLAIRRFSPLSHLS+L+
Sbjct: 53  NGKRGIRTLGTINSYNGLAIRRFSPLSHLSQLK 85


>emb|CAJ32479.1| hypothetical protein [Nicotiana tabacum]
          Length = 90

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 145 SGERGIRTLGTNNSYNGLAIRRFSPLSHLSKLQ 47
           +G+RGIRTLGT NSYNGLAIRRFSPLSHLS+L+
Sbjct: 53  NGKRGIRTLGTINSYNGLAIRRFSPLSHLSQLK 85


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