BLASTX nr result
ID: Zingiber24_contig00038345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber24_contig00038345
(485 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT13221.1| hypothetical protein F775_05352 [Aegilops tauschii] 102 5e-20
dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare] 102 7e-20
ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat... 100 3e-19
dbj|BAD19190.1| zinc finger (CCCH-type) protein-like [Oryza sati... 96 6e-18
ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [S... 96 6e-18
ref|NP_001048367.1| Os02g0793200 [Oryza sativa Japonica Group] g... 96 6e-18
ref|XP_004978834.1| PREDICTED: putative pentatricopeptide repeat... 95 1e-17
ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea ma... 94 1e-17
ref|XP_006648038.1| PREDICTED: putative pentatricopeptide repeat... 92 9e-17
gb|EAY87834.1| hypothetical protein OsI_09254 [Oryza sativa Indi... 90 4e-16
ref|XP_002532784.1| pentatricopeptide repeat-containing protein,... 89 6e-16
gb|EOX92888.1| Pentatricopeptide repeat superfamily protein, put... 80 2e-13
gb|EOX92886.1| Pentatricopeptide repeat superfamily protein, put... 80 2e-13
gb|EOX92885.1| Pentatricopeptide repeat superfamily protein, put... 80 2e-13
ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat... 79 8e-13
ref|XP_006450549.1| hypothetical protein CICLE_v10008244mg [Citr... 78 1e-12
ref|XP_006450548.1| hypothetical protein CICLE_v10008244mg [Citr... 78 1e-12
gb|EMJ16555.1| hypothetical protein PRUPE_ppa005519mg [Prunus pe... 77 3e-12
ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat... 74 2e-11
gb|ESW09419.1| hypothetical protein PHAVU_009G126100g [Phaseolus... 73 3e-11
>gb|EMT13221.1| hypothetical protein F775_05352 [Aegilops tauschii]
Length = 390
Score = 102 bits (254), Expect = 5e-20
Identities = 51/73 (69%), Positives = 60/73 (82%)
Frame = +2
Query: 5 NMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKD 184
NM+ KDDFTYTS+VHGL + R+H ASK LR CL+EGNSVL+S RAVIAGLR AGF+ D
Sbjct: 315 NMKLKDDFTYTSLVHGLCKVGRYHMASKFLRICLREGNSVLASAKRAVIAGLRSAGFQND 374
Query: 185 ARKLRESLRMARL 223
RK+R +LRMARL
Sbjct: 375 VRKVRAALRMARL 387
>dbj|BAK08037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 460
Score = 102 bits (253), Expect = 7e-20
Identities = 50/73 (68%), Positives = 60/73 (82%)
Frame = +2
Query: 5 NMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKD 184
NM+ KDDFTYTS+VHGL + R+H ASK LR CL+EGNS+L+S RAVIAGLR AGF+ D
Sbjct: 385 NMKLKDDFTYTSLVHGLCKVGRYHMASKFLRICLREGNSILASAKRAVIAGLRSAGFQND 444
Query: 185 ARKLRESLRMARL 223
RK+R +LRMARL
Sbjct: 445 VRKVRAALRMARL 457
>ref|XP_003578548.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Brachypodium distachyon]
Length = 460
Score = 99.8 bits (247), Expect = 3e-19
Identities = 50/73 (68%), Positives = 59/73 (80%)
Frame = +2
Query: 5 NMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKD 184
+M+ KDDFTYTS+VHGL R R+H ASK LR CL+EGN+VL+S RAVIAGLR AGFK D
Sbjct: 385 DMKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLREGNNVLASAKRAVIAGLRSAGFKND 444
Query: 185 ARKLRESLRMARL 223
RK+R +L MARL
Sbjct: 445 VRKVRSALYMARL 457
>dbj|BAD19190.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
gi|47497588|dbj|BAD19658.1| zinc finger (CCCH-type)
protein-like [Oryza sativa Japonica Group]
Length = 462
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/72 (66%), Positives = 57/72 (79%)
Frame = +2
Query: 8 MEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKDA 187
M+ KDDFTYTS+VHGL R R+H ASK LR CL EGN+VL+S RAVIAGLR +GFK D
Sbjct: 388 MKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLHEGNNVLASAKRAVIAGLRSSGFKNDL 447
Query: 188 RKLRESLRMARL 223
RK+R +L MA+L
Sbjct: 448 RKVRVALNMAKL 459
>ref|XP_002450407.1| hypothetical protein SORBIDRAFT_05g004830 [Sorghum bicolor]
gi|241936250|gb|EES09395.1| hypothetical protein
SORBIDRAFT_05g004830 [Sorghum bicolor]
Length = 462
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/73 (65%), Positives = 57/73 (78%)
Frame = +2
Query: 5 NMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKD 184
+M KDDFTYTS+VHGL + R+H ASK LR CL EGN+VL+S RAVI+GLR AGFK D
Sbjct: 387 SMRLKDDFTYTSLVHGLCKVGRYHMASKFLRICLHEGNNVLASAKRAVISGLRSAGFKND 446
Query: 185 ARKLRESLRMARL 223
RK+R +L MARL
Sbjct: 447 LRKVRSALYMARL 459
>ref|NP_001048367.1| Os02g0793200 [Oryza sativa Japonica Group]
gi|113537898|dbj|BAF10281.1| Os02g0793200 [Oryza sativa
Japonica Group] gi|215704904|dbj|BAG94932.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 473
Score = 95.5 bits (236), Expect = 6e-18
Identities = 48/72 (66%), Positives = 57/72 (79%)
Frame = +2
Query: 8 MEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKDA 187
M+ KDDFTYTS+VHGL R R+H ASK LR CL EGN+VL+S RAVIAGLR +GFK D
Sbjct: 399 MKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLHEGNNVLASAKRAVIAGLRSSGFKNDL 458
Query: 188 RKLRESLRMARL 223
RK+R +L MA+L
Sbjct: 459 RKVRVALNMAKL 470
>ref|XP_004978834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like isoform X1 [Setaria italica]
gi|514807974|ref|XP_004978835.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X2 [Setaria italica]
gi|514807976|ref|XP_004978836.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X3 [Setaria italica]
Length = 462
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/73 (64%), Positives = 58/73 (79%)
Frame = +2
Query: 5 NMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKD 184
+M+ KDDFTYTS+VHGL + R+H ASK LR CL EGN+VL+S RAVI+GLR AGFK D
Sbjct: 387 SMKLKDDFTYTSLVHGLCKVGRYHMASKFLRICLHEGNNVLASAKRAVISGLRSAGFKND 446
Query: 185 ARKLRESLRMARL 223
RK+R +L M+RL
Sbjct: 447 LRKVRSALYMSRL 459
>ref|NP_001170632.1| uncharacterized protein LOC100384682 [Zea mays]
gi|238006488|gb|ACR34279.1| unknown [Zea mays]
gi|413925463|gb|AFW65395.1| hypothetical protein
ZEAMMB73_565010 [Zea mays]
Length = 462
Score = 94.4 bits (233), Expect = 1e-17
Identities = 47/73 (64%), Positives = 58/73 (79%)
Frame = +2
Query: 5 NMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKD 184
+M+ KDDF+YTS+VHGL + R+H ASK LR CL EGN+VL+S RAVI+GLR AGFK D
Sbjct: 387 SMKLKDDFSYTSLVHGLCKVGRYHMASKFLRICLHEGNNVLASAKRAVISGLRSAGFKND 446
Query: 185 ARKLRESLRMARL 223
RK+R +L MARL
Sbjct: 447 LRKVRSALYMARL 459
>ref|XP_006648038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Oryza brachyantha]
Length = 475
Score = 91.7 bits (226), Expect = 9e-17
Identities = 46/72 (63%), Positives = 56/72 (77%)
Frame = +2
Query: 8 MEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKDA 187
M+ KDDFTYTS+VHGL R R+H ASK LR CL EGN+VL+S RAVI GLR +GFK D
Sbjct: 401 MKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLHEGNNVLASAKRAVIDGLRSSGFKNDL 460
Query: 188 RKLRESLRMARL 223
RK++ +L MA+L
Sbjct: 461 RKVQVALNMAKL 472
>gb|EAY87834.1| hypothetical protein OsI_09254 [Oryza sativa Indica Group]
Length = 502
Score = 89.7 bits (221), Expect = 4e-16
Identities = 44/64 (68%), Positives = 52/64 (81%)
Frame = +2
Query: 8 MEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKKDA 187
M+ KDDFTYTS+VHGL R R+H ASK LR CL+EGN+VL+S RAVIAGLR +GFK D
Sbjct: 388 MKLKDDFTYTSLVHGLCRVGRYHMASKFLRICLREGNNVLASAKRAVIAGLRSSGFKNDL 447
Query: 188 RKLR 199
RK+R
Sbjct: 448 RKVR 451
>ref|XP_002532784.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527472|gb|EEF29603.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 487
Score = 89.0 bits (219), Expect = 6e-16
Identities = 39/74 (52%), Positives = 58/74 (78%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
E+M+ +D FTY+S+VH L +N RFH+ASKLL +CL+ G +L S R VI+GLR +GF+K
Sbjct: 411 ESMKMRDSFTYSSLVHNLCKNGRFHRASKLLLSCLRSGMKILPSAQRVVISGLRYSGFQK 470
Query: 182 DARKLRESLRMARL 223
+ARKL+ +++AR+
Sbjct: 471 EARKLKSKIKLARM 484
>gb|EOX92888.1| Pentatricopeptide repeat superfamily protein, putative isoform 4
[Theobroma cacao] gi|508700993|gb|EOX92889.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 4 [Theobroma cacao]
Length = 490
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
++ME +D FTY+S+VH L R R+ ASKLL +CL+ G +L S RAV++GLR +GF
Sbjct: 414 KSMEVRDSFTYSSLVHNLCRAGRYRSASKLLLSCLRSGMKILKSAQRAVLSGLRYSGFPG 473
Query: 182 DARKLRESLRMARLSQY 232
+ARK++ +R+AR+ Y
Sbjct: 474 EARKVQSKIRIARILNY 490
>gb|EOX92886.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
[Theobroma cacao] gi|508700991|gb|EOX92887.1|
Pentatricopeptide repeat superfamily protein, putative
isoform 2 [Theobroma cacao]
Length = 457
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
++ME +D FTY+S+VH L R R+ ASKLL +CL+ G +L S RAV++GLR +GF
Sbjct: 381 KSMEVRDSFTYSSLVHNLCRAGRYRSASKLLLSCLRSGMKILKSAQRAVLSGLRYSGFPG 440
Query: 182 DARKLRESLRMARLSQY 232
+ARK++ +R+AR+ Y
Sbjct: 441 EARKVQSKIRIARILNY 457
>gb|EOX92885.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
[Theobroma cacao]
Length = 505
Score = 80.5 bits (197), Expect = 2e-13
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
++ME +D FTY+S+VH L R R+ ASKLL +CL+ G +L S RAV++GLR +GF
Sbjct: 429 KSMEVRDSFTYSSLVHNLCRAGRYRSASKLLLSCLRSGMKILKSAQRAVLSGLRYSGFPG 488
Query: 182 DARKLRESLRMARLSQY 232
+ARK++ +R+AR+ Y
Sbjct: 489 EARKVQSKIRIARILNY 505
>ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449468117|ref|XP_004151768.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
gi|449532400|ref|XP_004173169.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like [Cucumis sativus]
Length = 456
Score = 78.6 bits (192), Expect = 8e-13
Identities = 40/73 (54%), Positives = 52/73 (71%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
E+ME +D FTYTS+VH L + RRF ASKLL +C ++G VL + RAVI GL +GF
Sbjct: 381 ESMETRDSFTYTSLVHNLCKARRFRCASKLLISCSRDGMKVLKATRRAVIDGLCSSGFTS 440
Query: 182 DARKLRESLRMAR 220
+ARKL+ LR+AR
Sbjct: 441 EARKLKFKLRLAR 453
>ref|XP_006450549.1| hypothetical protein CICLE_v10008244mg [Citrus clementina]
gi|557553775|gb|ESR63789.1| hypothetical protein
CICLE_v10008244mg [Citrus clementina]
Length = 319
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/75 (48%), Positives = 55/75 (73%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
E+ME KD FTY+S+VH L + +R ASKLL +CLK G +L S +AV+ GLR +G ++
Sbjct: 244 ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 303
Query: 182 DARKLRESLRMARLS 226
+A+K++ +RMA++S
Sbjct: 304 EAKKIQSKIRMAKIS 318
>ref|XP_006450548.1| hypothetical protein CICLE_v10008244mg [Citrus clementina]
gi|568844658|ref|XP_006476201.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X1 [Citrus sinensis]
gi|568844660|ref|XP_006476202.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X2 [Citrus sinensis]
gi|568844662|ref|XP_006476203.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X3 [Citrus sinensis]
gi|557553774|gb|ESR63788.1| hypothetical protein
CICLE_v10008244mg [Citrus clementina]
Length = 456
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/75 (48%), Positives = 55/75 (73%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
E+ME KD FTY+S+VH L + +R ASKLL +CLK G +L S +AV+ GLR +G ++
Sbjct: 381 ESMEVKDSFTYSSMVHNLCKAKRLPSASKLLLSCLKSGVRILKSAQKAVVDGLRHSGCRR 440
Query: 182 DARKLRESLRMARLS 226
+A+K++ +RMA++S
Sbjct: 441 EAKKIQSKIRMAKIS 455
>gb|EMJ16555.1| hypothetical protein PRUPE_ppa005519mg [Prunus persica]
Length = 456
Score = 76.6 bits (187), Expect = 3e-12
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
++ME KD TYTS+VH L R RF ASKL+ CLK+G +L + RAV+AGLR +G+
Sbjct: 381 KSMETKDSVTYTSLVHNLCRAGRFRCASKLMMKCLKDGKKILRATKRAVVAGLRSSGYTD 440
Query: 182 DARKLRESLRMARL 223
+A+KL+ +++AR+
Sbjct: 441 EAKKLQWKIQVARI 454
>ref|XP_003522160.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At4g17915-like isoform X1 [Glycine max]
gi|571444666|ref|XP_006576572.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X2 [Glycine max]
gi|571444669|ref|XP_006576573.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X3 [Glycine max]
gi|571444671|ref|XP_006576574.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X4 [Glycine max]
gi|571444673|ref|XP_006576575.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At4g17915-like isoform X5 [Glycine max]
Length = 461
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/73 (53%), Positives = 51/73 (69%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
E ME KD FTYT +VH L R RRF ASK+L +CLK G VL + RAVI GLR G+
Sbjct: 386 EVMEVKDSFTYTIVVHNLCRARRFLCASKVLVSCLKCGYQVLRATQRAVIVGLRSIGYAN 445
Query: 182 DARKLRESLRMAR 220
+ARK++ ++R+A+
Sbjct: 446 EARKVKLTIRLAQ 458
>gb|ESW09419.1| hypothetical protein PHAVU_009G126100g [Phaseolus vulgaris]
Length = 498
Score = 73.2 bits (178), Expect = 3e-11
Identities = 39/74 (52%), Positives = 49/74 (66%)
Frame = +2
Query: 2 ENMEHKDDFTYTSIVHGLTRNRRFHKASKLLRNCLKEGNSVLSSIHRAVIAGLRIAGFKK 181
E ME KD FTYT +VH L + F ASK+L +CLK G VL + RAV+ GLR GF
Sbjct: 422 EMMEVKDSFTYTILVHNLCKAGSFLSASKVLVSCLKCGYQVLRATQRAVLDGLRSIGFTN 481
Query: 182 DARKLRESLRMARL 223
+ RKLR+ +R+ARL
Sbjct: 482 EERKLRKRIRLARL 495